; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005930 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005930
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr6:33862550..33870091
RNA-Seq ExpressionLag0005930
SyntenyLag0005930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033822.1 uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]2.5e-3637.11Show/hide
Query:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------
        MVYF E+ D  K CL+ILKD  Q +++G++L V E   EN   SQ   ++  +L +WSK + +N  S L  WFLES IHNK                   
Subjt:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------

Query:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF----------------------------------------
                                L +ARN  ILK+A LFD VM S+YTYDRN+DI++AF                                        
Subjt:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF----------------------------------------

Query:  --------------C-------EISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY
                      C       +ISL PE FKVASLM EGY FSL IPVLANIY  L  I+ +S   G S ACF +HYV+ WLA Y NTHY
Subjt:  --------------C-------EISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY

KAA0050733.1 uncharacterized protein E6C27_scaffold560G00370 [Cucumis melo var. makuwa]2.5e-3636.43Show/hide
Query:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------
        MVYF E+ D  K CL+ILKD  Q +++G++L V +   EN   SQ   ++  +L +WSK + +N  S L  WFLES IHNK                   
Subjt:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------

Query:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCE--------------------------------------
                                L +ARN  ILK+ RLFD VM S+YTYDRN+DI++AFCE                                      
Subjt:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCE--------------------------------------

Query:  -----------------------ISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY
                               IS  PEVFKVASLM EGY FSL IPVLANIY  L  I+ ++   G S  CF +HYV+ WLA Y NTHY
Subjt:  -----------------------ISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY

TYK08451.1 uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa]1.3e-3242.48Show/hide
Query:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRL---MNQESSLK---VWFLESPIH---------NKLEIA
        MVYF E+ D  K CL+ILKD  Q +++G+IL V E   EN   SQ   D+  +L +WSK ++    + +  LK       +SP            +L +A
Subjt:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRL---MNQESSLK---VWFLESPIH---------NKLEIA

Query:  RNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCEISLCPEV------------------------FKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASP
        RN  ILK+ARLFD VM S+YTYD N+DI++AFCE + CP                           KVASLM EG  FSL IPVLANIY  L  I+  + 
Subjt:  RNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCEISLCPEV------------------------FKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASP

Query:  PTGCSKACFLVHYVYVWLAYYINTHY
          G S ACF +HYV+ WLA Y NT+Y
Subjt:  PTGCSKACFLVHYVYVWLAYYINTHY

TYK21863.1 uncharacterized protein E5676_scaffold836G00160 [Cucumis melo var. makuwa]2.5e-3637.11Show/hide
Query:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------
        MVYF E+ D  K CL+ILKD  Q +++G++L V E   EN   SQ   ++  +L +WSK + +N  S L  WFLES IHNK                   
Subjt:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------

Query:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF----------------------------------------
                                L +ARN  ILK+A LFD VM S+YTYDRN+DI++AF                                        
Subjt:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF----------------------------------------

Query:  --------------C-------EISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY
                      C       +ISL PE FKVASLM EGY FSL IPVLANIY  L  I+ +S   G S ACF +HYV+ WLA Y NTHY
Subjt:  --------------C-------EISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]5.2e-2627.92Show/hide
Query:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------
        MV+F E+ D  K CL+ILKD  Q +E G+IL V E  +EN   SQ   D+   L +WSK R +N  SSLK WFLES IHNK                   
Subjt:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------

Query:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCE--------------------------------------
                                L +ARN  +LK+A LF+ VM SLYTYDRN+DI +AFCE                                      
Subjt:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCE--------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------ISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY
                                  +SL PEVFKVASLM EGY FSL +PVLANIY  L  ++ ++   G S ACF +HYV+ WLA Y NTHY
Subjt:  --------------------------ISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.1e-0237.97Show/hide
Query:  QEELEARLEAVKAKRDEISKLIVKKEDLLNQHQLKASKLQGTISSIEDVSVLTDVDANTLAMLRGMLEDAQQELKNYKW
        + +LEA+L+ V+A+  ++S +I K +  L Q Q + SK    I  +E   ++ D+DA  L+ LR  LE   +ELKN+KW
Subjt:  QEELEARLEAVKAKRDEISKLIVKKEDLLNQHQLKASKLQGTISSIEDVSVLTDVDANTLAMLRGMLEDAQQELKNYKW

TrEMBL top hitse value%identityAlignment
A0A5A7SRI5 Uncharacterized protein1.2e-3637.11Show/hide
Query:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------
        MVYF E+ D  K CL+ILKD  Q +++G++L V E   EN   SQ   ++  +L +WSK + +N  S L  WFLES IHNK                   
Subjt:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------

Query:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF----------------------------------------
                                L +ARN  ILK+A LFD VM S+YTYDRN+DI++AF                                        
Subjt:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF----------------------------------------

Query:  --------------C-------EISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY
                      C       +ISL PE FKVASLM EGY FSL IPVLANIY  L  I+ +S   G S ACF +HYV+ WLA Y NTHY
Subjt:  --------------C-------EISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY

A0A5A7T6J5 Putative transposase2.4e-2142.76Show/hide
Query:  KLEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCEISLCPE-------------------------------------------VFKVASLMVEGY
        +L +ARN  +LK ARLF+ +M S+YTYDRN+DI++AFCE + CP                                            VFKVA LM EGY
Subjt:  KLEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCEISLCPE-------------------------------------------VFKVASLMVEGY

Query:  AFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHYVV
         FSL IP+LANIY  L  I+ ++   G S ACF +HYV+ WLA Y NTHY V
Subjt:  AFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHYVV

A0A5A7U4C3 Uncharacterized protein1.2e-3636.43Show/hide
Query:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------
        MVYF E+ D  K CL+ILKD  Q +++G++L V +   EN   SQ   ++  +L +WSK + +N  S L  WFLES IHNK                   
Subjt:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------

Query:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCE--------------------------------------
                                L +ARN  ILK+ RLFD VM S+YTYDRN+DI++AFCE                                      
Subjt:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCE--------------------------------------

Query:  -----------------------ISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY
                               IS  PEVFKVASLM EGY FSL IPVLANIY  L  I+ ++   G S  CF +HYV+ WLA Y NTHY
Subjt:  -----------------------ISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY

A0A5D3C9B7 Uncharacterized protein6.2e-3342.48Show/hide
Query:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRL---MNQESSLK---VWFLESPIH---------NKLEIA
        MVYF E+ D  K CL+ILKD  Q +++G+IL V E   EN   SQ   D+  +L +WSK ++    + +  LK       +SP            +L +A
Subjt:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRL---MNQESSLK---VWFLESPIH---------NKLEIA

Query:  RNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCEISLCPEV------------------------FKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASP
        RN  ILK+ARLFD VM S+YTYD N+DI++AFCE + CP                           KVASLM EG  FSL IPVLANIY  L  I+  + 
Subjt:  RNEMILKKARLFDGVMGSLYTYDRNTDIIQAFCEISLCPEV------------------------FKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASP

Query:  PTGCSKACFLVHYVYVWLAYYINTHY
          G S ACF +HYV+ WLA Y NT+Y
Subjt:  PTGCSKACFLVHYVYVWLAYYINTHY

A0A5D3DEA3 Uncharacterized protein1.2e-3637.11Show/hide
Query:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------
        MVYF E+ D  K CL+ILKD  Q +++G++L V E   EN   SQ   ++  +L +WSK + +N  S L  WFLES IHNK                   
Subjt:  MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNK-------------------

Query:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF----------------------------------------
                                L +ARN  ILK+A LFD VM S+YTYDRN+DI++AF                                        
Subjt:  ------------------------LEIARNEMILKKARLFDGVMGSLYTYDRNTDIIQAF----------------------------------------

Query:  --------------C-------EISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY
                      C       +ISL PE FKVASLM EGY FSL IPVLANIY  L  I+ +S   G S ACF +HYV+ WLA Y NTHY
Subjt:  --------------C-------EISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTATTTTTGCGAGCATCCCGATCCAAAGAAAAACTGCTTAGTCATCTTGAAGGATAGATATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGT
GCATGAGAACTTTGGGACATCGCAGTCTTCCTTAGATAGTTCTAGTGTCCTATCTAGATGGTCTAAAGGGAGGCTCATGAATCAAGAATCATCCCTGAAAGTGTGGTTCT
TAGAATCTCCAATACATAACAAATTGGAAATTGCTCGCAATGAGATGATACTTAAGAAGGCTCGTCTGTTTGATGGTGTGATGGGTTCCTTATACACCTATGACCGTAAT
ACTGATATTATTCAAGCCTTTTGTGAGATTTCTCTTTGTCCAGAGGTCTTCAAAGTTGCAAGTCTTATGGTTGAAGGTTATGCTTTTAGTCTTGTTATTCCAGTTTTGGC
TAATATCTATCATAGATTGGGCCATATTTATAAAGCGTCTCCTCCGACAGGTTGCTCAAAGGCTTGTTTTCTCGTGCATTATGTTTATGTTTGGCTTGCTTATTACATTA
ACACGCATTATGTCGTTCTAGAAAAAGAAGGCATAGAAAAGTTAGTGGCTAGTGTTATTCCTCCTCCTCCCAAGCCGAAATTTCCTAAAAAGGTCGGTGATGGTAACAAA
CGTAAAAGGATTCACGTGTTTGAACCTGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAAATGGAATTCATTCATTCCCCTATTGGGACTGCTACAACAACA
AGCTTTCCATGCTTTAGACTGCTACATCATCAAGCTTTCATTGCTACAGCAACAAGCATCCCTTGCTACAGTAACAAGCTTTCCATGCCCCAGCTGCTACAACATCAAGC
TTCCATTGCAACAGCAACAAGCATCCCTTGCTACAACAACATGCTTTCCATTGCTACAGCAACAAGCATCCCTTGCTACAGCAACAAACTTTCCATGCTCTAGCTGCTAC
AATATATTAAACAAAATTAACTACGAATCGGTCTCAATCACACTTCCGCTTTACGGAATTACGGAATTACGGAATTCCAATCCTTCAGGTAGTCAGAGCAGTAGTAGCGA
TCATCATTGGAAAAGTCCAATAAACCATCGCATTGAGACTAGCGTTGCACAGTGTTCTGACACTCTTCTCTCAAGTTTTTGGCTTGAATTTGAAGTCTACAGTGCGTTGA
GATGCTACCCACAGGGTCTAGACACTTGGCCTCGGGAAAATAGCCCAAATTGCTCCGATTTTGCTCGTTTTAGCTCCAAAATGGCTCAAAACCTTCAAGAAGAATTAGAA
GCTAGACTTGAAGCTGTGAAAGCTAAGCGAGATGAGATTTCTAAGTTGATTGTCAAGAAGGAGGACCTTTTAAATCAACATCAACTCAAGGCTTCTAAACTGCAAGGAAC
TATAAGTAGTATTGAAGATGTCTCTGTTCTTACTGATGTTGATGCTAATACTTTGGCGATGCTTCGTGGAATGTTGGAAGATGCACAACAAGAGCTGAAGAACTACAAGT
GGATGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTATTTTTGCGAGCATCCCGATCCAAAGAAAAACTGCTTAGTCATCTTGAAGGATAGATATCAACCTGTTGAAAATGGAGTCATTCTTCATGTAGGAGAGGTGGT
GCATGAGAACTTTGGGACATCGCAGTCTTCCTTAGATAGTTCTAGTGTCCTATCTAGATGGTCTAAAGGGAGGCTCATGAATCAAGAATCATCCCTGAAAGTGTGGTTCT
TAGAATCTCCAATACATAACAAATTGGAAATTGCTCGCAATGAGATGATACTTAAGAAGGCTCGTCTGTTTGATGGTGTGATGGGTTCCTTATACACCTATGACCGTAAT
ACTGATATTATTCAAGCCTTTTGTGAGATTTCTCTTTGTCCAGAGGTCTTCAAAGTTGCAAGTCTTATGGTTGAAGGTTATGCTTTTAGTCTTGTTATTCCAGTTTTGGC
TAATATCTATCATAGATTGGGCCATATTTATAAAGCGTCTCCTCCGACAGGTTGCTCAAAGGCTTGTTTTCTCGTGCATTATGTTTATGTTTGGCTTGCTTATTACATTA
ACACGCATTATGTCGTTCTAGAAAAAGAAGGCATAGAAAAGTTAGTGGCTAGTGTTATTCCTCCTCCTCCCAAGCCGAAATTTCCTAAAAAGGTCGGTGATGGTAACAAA
CGTAAAAGGATTCACGTGTTTGAACCTGGGGCAAGACCGAATGGGGGCTGGGAACATAACAGTACAAAATGGAATTCATTCATTCCCCTATTGGGACTGCTACAACAACA
AGCTTTCCATGCTTTAGACTGCTACATCATCAAGCTTTCATTGCTACAGCAACAAGCATCCCTTGCTACAGTAACAAGCTTTCCATGCCCCAGCTGCTACAACATCAAGC
TTCCATTGCAACAGCAACAAGCATCCCTTGCTACAACAACATGCTTTCCATTGCTACAGCAACAAGCATCCCTTGCTACAGCAACAAACTTTCCATGCTCTAGCTGCTAC
AATATATTAAACAAAATTAACTACGAATCGGTCTCAATCACACTTCCGCTTTACGGAATTACGGAATTACGGAATTCCAATCCTTCAGGTAGTCAGAGCAGTAGTAGCGA
TCATCATTGGAAAAGTCCAATAAACCATCGCATTGAGACTAGCGTTGCACAGTGTTCTGACACTCTTCTCTCAAGTTTTTGGCTTGAATTTGAAGTCTACAGTGCGTTGA
GATGCTACCCACAGGGTCTAGACACTTGGCCTCGGGAAAATAGCCCAAATTGCTCCGATTTTGCTCGTTTTAGCTCCAAAATGGCTCAAAACCTTCAAGAAGAATTAGAA
GCTAGACTTGAAGCTGTGAAAGCTAAGCGAGATGAGATTTCTAAGTTGATTGTCAAGAAGGAGGACCTTTTAAATCAACATCAACTCAAGGCTTCTAAACTGCAAGGAAC
TATAAGTAGTATTGAAGATGTCTCTGTTCTTACTGATGTTGATGCTAATACTTTGGCGATGCTTCGTGGAATGTTGGAAGATGCACAACAAGAGCTGAAGAACTACAAGT
GGATGTCGTGA
Protein sequenceShow/hide protein sequence
MVYFCEHPDPKKNCLVILKDRYQPVENGVILHVGEVVHENFGTSQSSLDSSSVLSRWSKGRLMNQESSLKVWFLESPIHNKLEIARNEMILKKARLFDGVMGSLYTYDRN
TDIIQAFCEISLCPEVFKVASLMVEGYAFSLVIPVLANIYHRLGHIYKASPPTGCSKACFLVHYVYVWLAYYINTHYVVLEKEGIEKLVASVIPPPPKPKFPKKVGDGNK
RKRIHVFEPGARPNGGWEHNSTKWNSFIPLLGLLQQQAFHALDCYIIKLSLLQQQASLATVTSFPCPSCYNIKLPLQQQQASLATTTCFPLLQQQASLATATNFPCSSCY
NILNKINYESVSITLPLYGITELRNSNPSGSQSSSSDHHWKSPINHRIETSVAQCSDTLLSSFWLEFEVYSALRCYPQGLDTWPRENSPNCSDFARFSSKMAQNLQEELE
ARLEAVKAKRDEISKLIVKKEDLLNQHQLKASKLQGTISSIEDVSVLTDVDANTLAMLRGMLEDAQQELKNYKWMS