CuGenDBv2

Gene ID	Lag0005937
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Peroxisome biogenesis protein 12
Genome location	chr6:34043475..34044775
RNA-Seq Expression	Lag0005937
Synteny	Lag0005937
Gene Ontology terms	GO:0006513 - protein monoubiquitination (biological process) GO:0016558 - protein import into peroxisome matrix (biological process) GO:0005779 - integral component of peroxisomal membrane (cellular component) GO:1990429 - peroxisomal importomer complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0008022 - protein C-terminus binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR006845 - Pex, N-terminal IPR017375 - Peroxisome assembly protein 12

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0049977.1 peroxisome biogenesis protein 12 [Cucumis melo var. makuwa]

5.2e-40

65.75

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFH+VLDYEDEF   +   L+ +     DASFSESLYGLRRRAVNV+VKKEDARSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGLEKHQKV+ VA L VLPYFKSKLHSIYNKEREARLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

XP_004152815.1 peroxisome biogenesis protein 12 [Cucumis sativus]

1.5e-39

65.07

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFH+VLDYEDEF   +   L+ +     DASFSESLYGLRRRAVNV+VKKEDARSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGLEKHQKV+ VA L VLPYFKSKLHSIYNKERE RLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

XP_008441822.1 PREDICTED: peroxisome biogenesis protein 12 [Cucumis melo]

5.2e-40

65.75

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFH+VLDYEDEF   +   L+ +     DASFSESLYGLRRRAVNV+VKKEDARSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGLEKHQKV+ VA L VLPYFKSKLHSIYNKEREARLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

XP_038890543.1 peroxisome biogenesis protein 12 isoform X1 [Benincasa hispida]

1.8e-40

66.44

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFH+VLDYEDEF   +   L+ +     DASFSESLYGLRRRAVNVKVKKEDARSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGLEKHQKV+ VA L VLPYFKSKLHSIYNKEREARLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

XP_038890544.1 peroxisome biogenesis protein 12 isoform X2 [Benincasa hispida]

1.8e-40

66.44

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFH+VLDYEDEF   +   L+ +     DASFSESLYGLRRRAVNVKVKKEDARSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGLEKHQKV+ VA L VLPYFKSKLHSIYNKEREARLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJL9 Peroxisome biogenesis protein 12

7.3e-40

65.07

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFH+VLDYEDEF   +   L+ +     DASFSESLYGLRRRAVNV+VKKEDARSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGLEKHQKV+ VA L VLPYFKSKLHSIYNKERE RLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

A0A1S3B4B4 Peroxisome biogenesis protein 12

2.5e-40

65.75

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFH+VLDYEDEF   +   L+ +     DASFSESLYGLRRRAVNV+VKKEDARSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGLEKHQKV+ VA L VLPYFKSKLHSIYNKEREARLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

A0A5D3C955 Peroxisome biogenesis protein 12

2.5e-40

65.75

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFH+VLDYEDEF   +   L+ +     DASFSESLYGLRRRAVNV+VKKEDARSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGLEKHQKV+ VA L VLPYFKSKLHSIYNKEREARLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

A0A6J1EV91 Peroxisome biogenesis protein 12

8.0e-39

63.7

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFHRVLDYEDEF   +   L+ +     DASFSESLYGLRRR VNVKVKKED+RSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGL KHQKV+ V  L VLPYFKSKLH+IYNKEREARLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

A0A6J1K3G6 Peroxisome biogenesis protein 12

2.3e-38

63.01

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + VLALRRPFFHRVLDYEDEF   +   L+ +     DASFSESLYGLRRR VNVKVKKED+RSVS DG
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG
        IQ RGL KHQKV+ V  L VLPYFKSKLH+IYNKERE RLQASLWG
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWG

SwissProt top hits

e value

%identity

Alignment

Q9M841 Peroxisome biogenesis protein 12

1.3e-30

42.25

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + V ALRR F H++LDYEDEF   +   L+ +     D SF+ESLYGLRR++  ++++K+ AR  SS+ 
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWGGRSN-------FNGFQS-----PFGSLKIAVLGGLSTKWRK
        +Q  GLEK Q+++ V  L VLPYFKSKLH+IYNKEREARL+ SLWG           F G  S     P G+ +++V   L+TK +K
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWGGRSN-------FNGFQS-----PFGSLKIAVLGGLSTKWRK

Arabidopsis top hits

e value

%identity

Alignment

AT3G04460.1 peroxin-12

9.4e-32

42.25

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Query:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG
        G G    FF  A    L   +      +++ + V ALRR F H++LDYEDEF   +   L+ +     D SF+ESLYGLRR++  ++++K+ AR  SS+ 
Subjt:  GVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVND----DASFSESLYGLRRRAVNVKVKKEDARSVSSDG

Query:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWGGRSN-------FNGFQS-----PFGSLKIAVLGGLSTKWRK
        +Q  GLEK Q+++ V  L VLPYFKSKLH+IYNKEREARL+ SLWG           F G  S     P G+ +++V   L+TK +K
Subjt:  IQQRGLEKHQKVIFVASLAVLPYFKSKLHSIYNKEREARLQASLWGGRSN-------FNGFQS-----PFGSLKIAVLGGLSTKWRK

Sequences

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CDS sequence

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ATGGTTGGTGTTGGTTGTTCAATCAATTTTTTCTTTTGGGCGGTACTGATCGATCTCGAAGTTGGCATACATGGTTGTGCTCATTATGTATCCTTTCATATGGCTGTTTT
AGCTCTAAGAAGACCATTCTTTCACAGGGTTTTAGACTATGAAGATGAATTCTTGAAACACATAGCTTATGAACTACAGGTGAATGATGATGCTTCATTTTCAGAATCCC
TGTATGGCTTAAGAAGAAGAGCTGTAAATGTAAAAGTAAAAAAGGAAGATGCTCGTTCCGTCTCTAGTGATGGTATTCAACAAAGAGGGTTAGAAAAGCATCAAAAAGTT
ATTTTTGTTGCTTCCTTGGCTGTATTGCCCTATTTCAAGTCAAAGTTGCACTCAATTTACAATAAGGAAAGGGAAGCCAGGCTTCAAGCAAGTTTATGGGGTGGAAGATC
AAACTTCAATGGTTTTCAAAGTCCCTTTGGAAGCTTAAAGATTGCCGTCCTGGGAGGTCTCTCTACAAAATGGAGAAAGTCTCAACACAGTGTTCCTATTTTCGTTGGAT
TGCTGGTGATCAGAGCTTAG

mRNA sequence

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Protein sequence

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MVGVGCSINFFFWAVLIDLEVGIHGCAHYVSFHMAVLALRRPFFHRVLDYEDEFLKHIAYELQVNDDASFSESLYGLRRRAVNVKVKKEDARSVSSDGIQQRGLEKHQKV
IFVASLAVLPYFKSKLHSIYNKEREARLQASLWGGRSNFNGFQSPFGSLKIAVLGGLSTKWRKSQHSVPIFVGLLVIRA

Lag0005937 (gene) of Sponge gourd (AG-4) v1 genome