; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005940 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005940
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:34082249..34083193
RNA-Seq ExpressionLag0005940
SyntenyLag0005940
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]6.3e-3530.96Show/hide
Query:  SKAEETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQ-EQTTINMVGFNLYLCKFKNGKIKSLIADNGP
        S+AE T + + + L   E+E A+V ++ ++ I    + ++  LV K+L+ K+ N E FK  +  IWNQ  Q  + +VG N ++  F N + ++ + + GP
Subjt:  SKAEETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQ-EQTTINMVGFNLYLCKFKNGKIKSLIADNGP

Query:  WFFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDW
        W F K+L++  +PKG      ++F    FW+  H +   C +++    L   +G+V +I    E  +C G  +RVK+Q+D TKPLKR + +     ++  
Subjt:  WFFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDW

Query:  WIPITYEKLPDFCYGCGLLGHTLKEC--EGSNHDGSPVEELPYGAWLRELVLLKSREYEPLPRSIVNQAGHGRGRTWEGGR
         + + YE+LPDFC+ CG +GH+++EC  E +       ++  +G+W+R   + KS+       S+   +   RGR+ EG R
Subjt:  WIPITYEKLPDFCYGCGLLGHTLKEC--EGSNHDGSPVEELPYGAWLRELVLLKSREYEPLPRSIVNQAGHGRGRTWEGGR

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]2.6e-3632.49Show/hide
Query:  EEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIW-NQEQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLLFMEPKGGN
        +++   + ++K    +R ++ L  +L+ K ++ K  N E FKS +  IW  + + T+ ++G N++  +F+N   +  I + GPW FDK LL+  E  G  
Subjt:  EEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIW-NQEQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLLFMEPKGGN

Query:  YGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKLPDFCYGCG
           D++FRYV FWI  H L  AC +R++   LG ++GQV +I   E   +C G  +R+++ ID   PLKRG+ ++  D +    + I YE+LP+FCY CG
Subjt:  YGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKLPDFCYGCG

Query:  LLGHTLKECEGSNHDGSPVEELPYGAWLRELVLLKSR
         +GH +++C  +  + +      +G W+R +   +S+
Subjt:  LLGHTLKECEGSNHDGSPVEELPYGAWLRELVLLKSR

XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]4.9e-3535.98Show/hide
Query:  KKLENALVCKILSQKQSNPEMFKSKMPHIWNQ-EQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKL
        K L   LV K+L  +  N E FKS +  +W   ++  I  +G N ++ KF     K  +   GPW FD+ALL+  EPKG        F + +FWI    +
Subjt:  KKLENALVCKILSQKQSNPEMFKSKMPHIWNQ-EQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKL

Query:  SFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPV
          AC  +++  ELG ++G V +I   +E  +C G   R+++ I+ T PLK+ +FL  ++ + D  +P+ YE+LPDFCY CG++GH  KEC  +   G   
Subjt:  SFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPV

Query:  EELPYGAWLRELVL
        E+LPYG W++ +++
Subjt:  EELPYGAWLRELVL

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.4e-3434.69Show/hide
Query:  AEETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQE--QTTINMVGFNLYLCKFKNGKIKSLIADNGPW
        A   L+++    K+T EE      +    ++ + K LE +L+CK+LS++  +  + K+ +   W  +    +++++GFN++L  F     ++ I   GPW
Subjt:  AEETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQE--QTTINMVGFNLYLCKFKNGKIKSLIADNGPW

Query:  FFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWW
         FD+AL++   P       D++FR VS W+HF  LS AC ++ +A  LG+ +G    +      + C G  LRV+++ D  KPL RGI L+        W
Subjt:  FFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWW

Query:  IPITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPVEELPYGAWLR
        IPI YE+LPDF Y CG L H LK+C     D S  + L YG WLR
Subjt:  IPITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPVEELPYGAWLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.0e-3737.18Show/hide
Query:  KVTEEERASVFKLKDEEIDRSKKKL--ENALVC---KILSQKQSNPEMFKSKMPHIWN-QEQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLL
        K T +E  +V       IDR K  L  +N  +C   K+ + K+ + E  +S M  +W     T    +G N+Y+  FK+   KS +  +GPW F+K+LL+
Subjt:  KVTEEERASVFKLKDEEIDRSKKKL--ENALVC---KILSQKQSNPEMFKSKMPHIWN-QEQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLL

Query:  FMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKL
           P   N   D+ F + +FWI  H + F C S ++A  LG+ LG V +I   +  D   G  +RV+++ID +KPL+RGI L + D K D W P+ YEKL
Subjt:  FMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKL

Query:  PDFCYGCGLLGHTLKECEGSNHDGSPVEELPYGAWLRELVLLKSREYEPLPRSIVNQAGHGRGRTWEGGRGG---WR
        PDFCY CG +GH+ +ECE  +   +      YG WLR  +L KS  + P           GRG    GGRGG   WR
Subjt:  PDFCYGCGLLGHTLKECEGSNHDGSPVEELPYGAWLRELVLLKSREYEPLPRSIVNQAGHGRGRTWEGGRGG---WR

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein3.1e-3530.96Show/hide
Query:  SKAEETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQ-EQTTINMVGFNLYLCKFKNGKIKSLIADNGP
        S+AE T + + + L   E+E A+V ++ ++ I    + ++  LV K+L+ K+ N E FK  +  IWNQ  Q  + +VG N ++  F N + ++ + + GP
Subjt:  SKAEETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQ-EQTTINMVGFNLYLCKFKNGKIKSLIADNGP

Query:  WFFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDW
        W F K+L++  +PKG      ++F    FW+  H +   C +++    L   +G+V +I    E  +C G  +RVK+Q+D TKPLKR + +     ++  
Subjt:  WFFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDW

Query:  WIPITYEKLPDFCYGCGLLGHTLKEC--EGSNHDGSPVEELPYGAWLRELVLLKSREYEPLPRSIVNQAGHGRGRTWEGGR
         + + YE+LPDFC+ CG +GH+++EC  E +       ++  +G+W+R   + KS+       S+   +   RGR+ EG R
Subjt:  WIPITYEKLPDFCYGCGLLGHTLKEC--EGSNHDGSPVEELPYGAWLRELVLLKSREYEPLPRSIVNQAGHGRGRTWEGGR

A0A5C7H9Y2 CCHC-type domain-containing protein1.2e-3632.49Show/hide
Query:  EEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIW-NQEQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLLFMEPKGGN
        +++   + ++K    +R ++ L  +L+ K ++ K  N E FKS +  IW  + + T+ ++G N++  +F+N   +  I + GPW FDK LL+  E  G  
Subjt:  EEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIW-NQEQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLLFMEPKGGN

Query:  YGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKLPDFCYGCG
           D++FRYV FWI  H L  AC +R++   LG ++GQV +I   E   +C G  +R+++ ID   PLKRG+ ++  D +    + I YE+LP+FCY CG
Subjt:  YGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKLPDFCYGCG

Query:  LLGHTLKECEGSNHDGSPVEELPYGAWLRELVLLKSR
         +GH +++C  +  + +      +G W+R +   +S+
Subjt:  LLGHTLKECEGSNHDGSPVEELPYGAWLRELVLLKSR

A0A6J1BSZ1 uncharacterized protein LOC1110054816.8e-3534.69Show/hide
Query:  AEETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQE--QTTINMVGFNLYLCKFKNGKIKSLIADNGPW
        A   L+++    K+T EE      +    ++ + K LE +L+CK+LS++  +  + K+ +   W  +    +++++GFN++L  F     ++ I   GPW
Subjt:  AEETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQE--QTTINMVGFNLYLCKFKNGKIKSLIADNGPW

Query:  FFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWW
         FD+AL++   P       D++FR VS W+HF  LS AC ++ +A  LG+ +G    +      + C G  LRV+++ D  KPL RGI L+        W
Subjt:  FFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWW

Query:  IPITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPVEELPYGAWLR
        IPI YE+LPDF Y CG L H LK+C     D S  + L YG WLR
Subjt:  IPITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPVEELPYGAWLR

A0A6J1D765 uncharacterized protein LOC1110179025.1e-3837.18Show/hide
Query:  KVTEEERASVFKLKDEEIDRSKKKL--ENALVC---KILSQKQSNPEMFKSKMPHIWN-QEQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLL
        K T +E  +V       IDR K  L  +N  +C   K+ + K+ + E  +S M  +W     T    +G N+Y+  FK+   KS +  +GPW F+K+LL+
Subjt:  KVTEEERASVFKLKDEEIDRSKKKL--ENALVC---KILSQKQSNPEMFKSKMPHIWN-QEQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALLL

Query:  FMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKL
           P   N   D+ F + +FWI  H + F C S ++A  LG+ LG V +I   +  D   G  +RV+++ID +KPL+RGI L + D K D W P+ YEKL
Subjt:  FMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKL

Query:  PDFCYGCGLLGHTLKECEGSNHDGSPVEELPYGAWLRELVLLKSREYEPLPRSIVNQAGHGRGRTWEGGRGG---WR
        PDFCY CG +GH+ +ECE  +   +      YG WLR  +L KS  + P           GRG    GGRGG   WR
Subjt:  PDFCYGCGLLGHTLKECEGSNHDGSPVEELPYGAWLRELVLLKSREYEPLPRSIVNQAGHGRGRTWEGGRGG---WR

A0A6P9E2G0 uncharacterized protein LOC1183446881.5e-3435.27Show/hide
Query:  EETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQEQT-TINMVGFNLYLCKFKNGKIKSLIADNGPWFF
        EE +     GLK+TEEE+   + L +EEI  S+    + LV  + + ++ N   FK+ M  +WN E   T   +G N +L KF N  +++ +  + PW F
Subjt:  EETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQEQT-TINMVGFNLYLCKFKNGKIKSLIADNGPWFF

Query:  DKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIP
        D+ L+   E KG     D++F    FW+  H L FA  +++   +LG+  G+V  + + E+     GV LRVK+ I+ +KPL RG  ++  D++   WIP
Subjt:  DKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIP

Query:  ITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPVEELP--YGAWLRELVLLKSREYEPL
          YE+LP FCY CG++ H+   C     DGS   E P  YG WLR     K   Y+ L
Subjt:  ITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPVEELP--YGAWLRELVLLKSREYEPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.7e-0620.83Show/hide
Query:  IADNGPWFFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSK
        I   GPW F+  + +    +      D EF+ + FWI    +     + ++   +G                                   + G+FL + 
Subjt:  IADNGPWFFDKALLLFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSK

Query:  DSKDDWWIPITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPVEE
          +D   +   YEKL +FC  CG+L H   EC  S + G   ++
Subjt:  DSKDDWWIPITYEKLPDFCYGCGLLGHTLKECEGSNHDGSPVEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATTCGAAGGCTGAGGAAACCTTGGTCAAACAACTCATGGGACTTAAAGTTACTGAAGAAGAGCGTGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGACAG
ATCGAAGAAGAAGTTAGAGAATGCGTTGGTCTGCAAGATATTATCACAAAAACAAAGTAATCCTGAGATGTTCAAGTCCAAGATGCCTCACATATGGAACCAAGAGCAGA
CTACCATCAACATGGTGGGATTCAATTTGTATCTGTGCAAGTTCAAGAATGGGAAAATAAAAAGCTTAATCGCAGACAATGGTCCTTGGTTCTTTGATAAAGCTCTATTA
TTATTCATGGAACCAAAAGGAGGAAACTACGGGGATGATATCGAGTTCAGGTATGTATCCTTCTGGATTCATTTTCATAAACTCTCATTTGCTTGTTTTTCCAGGAAAGT
GGCAGCAGAATTAGGGAGCATACTTGGACAGGTGTCTCAGATTTATCTAAAGGAGGAAGTTGATCAATGTCGGGGTGTCACTTTACGGGTGAAAATTCAAATTGATGCTA
CCAAGCCTTTGAAGAGGGGAATTTTCTTATCTTCGAAGGATTCTAAAGATGACTGGTGGATTCCAATTACATATGAAAAGTTACCAGACTTTTGTTATGGATGCGGCTTG
TTGGGTCATACATTAAAAGAATGTGAGGGTTCTAACCATGACGGCTCTCCTGTTGAGGAACTGCCATATGGGGCGTGGCTTCGGGAGCTGGTTCTTTTGAAATCTAGAGA
GTATGAGCCTTTGCCTAGGTCCATAGTTAATCAGGCTGGTCATGGGAGAGGGCGAACGTGGGAAGGTGGCAGGGGTGGTTGGAGGGGAGGGCACCATGATGAAGGGGAGT
ATGGGCTGCTGATGGGTATGAGAGGAAGTAGGCCGGAAACGGTAAAGGAACTGAGGAAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGATTCGAAGGCTGAGGAAACCTTGGTCAAACAACTCATGGGACTTAAAGTTACTGAAGAAGAGCGTGCTAGTGTTTTCAAATTGAAAGATGAGGAAATTGACAG
ATCGAAGAAGAAGTTAGAGAATGCGTTGGTCTGCAAGATATTATCACAAAAACAAAGTAATCCTGAGATGTTCAAGTCCAAGATGCCTCACATATGGAACCAAGAGCAGA
CTACCATCAACATGGTGGGATTCAATTTGTATCTGTGCAAGTTCAAGAATGGGAAAATAAAAAGCTTAATCGCAGACAATGGTCCTTGGTTCTTTGATAAAGCTCTATTA
TTATTCATGGAACCAAAAGGAGGAAACTACGGGGATGATATCGAGTTCAGGTATGTATCCTTCTGGATTCATTTTCATAAACTCTCATTTGCTTGTTTTTCCAGGAAAGT
GGCAGCAGAATTAGGGAGCATACTTGGACAGGTGTCTCAGATTTATCTAAAGGAGGAAGTTGATCAATGTCGGGGTGTCACTTTACGGGTGAAAATTCAAATTGATGCTA
CCAAGCCTTTGAAGAGGGGAATTTTCTTATCTTCGAAGGATTCTAAAGATGACTGGTGGATTCCAATTACATATGAAAAGTTACCAGACTTTTGTTATGGATGCGGCTTG
TTGGGTCATACATTAAAAGAATGTGAGGGTTCTAACCATGACGGCTCTCCTGTTGAGGAACTGCCATATGGGGCGTGGCTTCGGGAGCTGGTTCTTTTGAAATCTAGAGA
GTATGAGCCTTTGCCTAGGTCCATAGTTAATCAGGCTGGTCATGGGAGAGGGCGAACGTGGGAAGGTGGCAGGGGTGGTTGGAGGGGAGGGCACCATGATGAAGGGGAGT
ATGGGCTGCTGATGGGTATGAGAGGAAGTAGGCCGGAAACGGTAAAGGAACTGAGGAAGTTGTGA
Protein sequenceShow/hide protein sequence
MTDSKAEETLVKQLMGLKVTEEERASVFKLKDEEIDRSKKKLENALVCKILSQKQSNPEMFKSKMPHIWNQEQTTINMVGFNLYLCKFKNGKIKSLIADNGPWFFDKALL
LFMEPKGGNYGDDIEFRYVSFWIHFHKLSFACFSRKVAAELGSILGQVSQIYLKEEVDQCRGVTLRVKIQIDATKPLKRGIFLSSKDSKDDWWIPITYEKLPDFCYGCGL
LGHTLKECEGSNHDGSPVEELPYGAWLRELVLLKSREYEPLPRSIVNQAGHGRGRTWEGGRGGWRGGHHDEGEYGLLMGMRGSRPETVKELRKL