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Lag0005948 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005948
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase core domain containing protein
Genome locationchr6:34209328..34209744
RNA-Seq ExpressionLag0005948
SyntenyLag0005948
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]1.3e-2962.1Show/hide
Query:  VAPSEGAGATSSEDVASIGFGTAQTQ-EINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQVFQQCRKGSLK
        V  S G   TS  ++++    +  T+  IN LYESWV  DQLLLGWLYNSMTPEVATQVMG+E+A +LW  +Q+LF VQS+AEEDYLRQVFQQ RKGSLK
Subjt:  VAPSEGAGATSSEDVASIGFGTAQTQ-EINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQVFQQCRKGSLK

Query:  MADYLRVMKADYLRVMKSHVDNLG
        M         D+LRVMKSH DNLG
Subjt:  MADYLRVMKADYLRVMKSHVDNLG

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]9.9e-2551.47Show/hide
Query:  KSCPPKFTQPVATSVAPSEGAGATSSEDVASIGFGTAQTQEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYL
        K CPP    P  T   P+   G+TSS+           +  +N  YE+W+VVD+LLLGWLYNSM  +VA QVMGF +++ELW  VQ+LF VQSRAE DYL
Subjt:  KSCPPKFTQPVATSVAPSEGAGATSSEDVASIGFGTAQTQEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYL

Query:  RQVFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNL
        +QVFQQ  KGSL+M         +YL++MKSH DNL
Subjt:  RQVFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNL

XP_038887140.1 uncharacterized protein LOC120077331 [Benincasa hispida]5.8e-2557.02Show/hide
Query:  FTQPVATSVAPS----EGAGATSSEDVASIGFGTAQTQ-EINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLR
        F QP+     P+     GA   S+E  +S G  ++ T  E+N  YE+W+VVDQLLLGWLYNSMTPEV  QVMG   AK+LW  +Q LF +QSR EEDYLR
Subjt:  FTQPVATSVAPS----EGAGATSSEDVASIGFGTAQTQ-EINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLR

Query:  QVFQQCRKGSLKMADYLRVMK
         VFQ+ RKG+LKM DYLR MK
Subjt:  QVFQQCRKGSLKMADYLRVMK

XP_038904321.1 uncharacterized protein LOC120090675 [Benincasa hispida]1.2e-2553.73Show/hide
Query:  TQPVATSVAP-----SEGAGATSSEDVASIGFGTAQTQEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQ
        T+     VAP     S G+GA+SS          + T E+N  Y +W+ VDQLLLGWLYNSMTP++A QVMGFE A++LW  +Q LF +QSRAEEDYLR 
Subjt:  TQPVATSVAP-----SEGAGATSSEDVASIGFGTAQTQEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQ

Query:  VFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNL
        VFQ  RKG+LKM         DYLR MK +VDNL
Subjt:  VFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNL

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]1.3e-2461.11Show/hide
Query:  SEGAGATSSEDVASIGFGTAQT---QEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQVFQQCRKGSLKM
        S GAGA       S G G + +    E+N  YESW+ VDQLLLGWLYNSMTPEVA QVMG E AK+LW  +  LF VQSR EEDYLR VFQ  RKG+LKM
Subjt:  SEGAGATSSEDVASIGFGTAQT---QEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQVFQQCRKGSLKM

Query:  ADYLRVMK
         +YL+ MK
Subjt:  ADYLRVMK

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein4.5e-2350Show/hide
Query:  CPPKFTQPVATS--VAPSEGAGATSSEDVASIGFGTAQTQEI-NLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDY
        CP  F    ++S      EGA AT       IG  ++ T  I N L+E WV  D LLLGWLYNSMTP+VA Q+MGF + ++LW+  QD F VQSRAEED+
Subjt:  CPPKFTQPVATS--VAPSEGAGATSSEDVASIGFGTAQTQEI-NLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDY

Query:  LRQVFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNLG
        LRQ+ Q  RKG+ KM         +YL VMK++VDNLG
Subjt:  LRQVFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNLG

A0A5A7UY76 Integrase, catalytic core7.7e-2350.82Show/hide
Query:  CPPKFTQPVATSVAPSEGAGATSSEDVASIGFGTAQTQEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQ
        CPPKF   +   +  S+  G   + D AS    + +T+ +N  ++ WV  D LLLGW+YNSMT EVA Q+MGF +AK+L E +QDLF VQSR EED+LR 
Subjt:  CPPKFTQPVATSVAPSEGAGATSSEDVASIGFGTAQTQEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQ

Query:  VFQQCRKGSLKMADYLRVMKAD
         FQ  RKG+ KM DYLR+MK +
Subjt:  VFQQCRKGSLKMADYLRVMKAD

A0A5D3BCH9 Uncharacterized protein4.5e-2350Show/hide
Query:  CPPKFTQPVATS--VAPSEGAGATSSEDVASIGFGTAQTQEI-NLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDY
        CP  F    ++S      EGA AT       IG  ++ T  I N L+E WV  D LLLGWLYNSMTP+VA Q+MGF + ++LW+  QD F VQSRAEED+
Subjt:  CPPKFTQPVATS--VAPSEGAGATSSEDVASIGFGTAQTQEI-NLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDY

Query:  LRQVFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNLG
        LRQ+ Q  RKG+ KM         +YL VMK++VDNLG
Subjt:  LRQVFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNLG

A0A6J1D5J0 uncharacterized protein LOC1110175016.5e-3062.1Show/hide
Query:  VAPSEGAGATSSEDVASIGFGTAQTQ-EINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQVFQQCRKGSLK
        V  S G   TS  ++++    +  T+  IN LYESWV  DQLLLGWLYNSMTPEVATQVMG+E+A +LW  +Q+LF VQS+AEEDYLRQVFQQ RKGSLK
Subjt:  VAPSEGAGATSSEDVASIGFGTAQTQ-EINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQVFQQCRKGSLK

Query:  MADYLRVMKADYLRVMKSHVDNLG
        M         D+LRVMKSH DNLG
Subjt:  MADYLRVMKADYLRVMKSHVDNLG

A0A6J1DCW4 uncharacterized protein LOC1110195984.8e-2551.47Show/hide
Query:  KSCPPKFTQPVATSVAPSEGAGATSSEDVASIGFGTAQTQEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYL
        K CPP    P  T   P+   G+TSS+           +  +N  YE+W+VVD+LLLGWLYNSM  +VA QVMGF +++ELW  VQ+LF VQSRAE DYL
Subjt:  KSCPPKFTQPVATSVAPSEGAGATSSEDVASIGFGTAQTQEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYL

Query:  RQVFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNL
        +QVFQQ  KGSL+M         +YL++MKSH DNL
Subjt:  RQVFQQCRKGSLKMADYLRVMKADYLRVMKSHVDNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCATGTCCTCCAAAATTTACTCAACCTGTCGCGACCAGTGTTGCTCCATCAGAAGGAGCTGGAGCTACGTCGTCTGAAGATGTAGCAAGTATTGGGTTTGGAAC
CGCTCAAACACAAGAGATTAATCTGTTGTATGAATCGTGGGTCGTTGTCGATCAGTTGCTTCTAGGTTGGTTGTATAACTCGATGACCCCTGAGGTTGCTACTCAGGTTA
TGGGCTTCGAAAGTGCTAAAGAACTATGGGAGGAAGTTCAAGACTTATTCGACGTTCAGTCGCGTGCCGAAGAGGATTATTTGCGCCAAGTGTTTCAGCAGTGCAGAAAG
GGGAGTCTGAAGATGGCAGATTACCTTCGAGTGATGAAGGCAGACTACCTTCGAGTGATGAAGAGCCACGTCGACAATCTAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCATGTCCTCCAAAATTTACTCAACCTGTCGCGACCAGTGTTGCTCCATCAGAAGGAGCTGGAGCTACGTCGTCTGAAGATGTAGCAAGTATTGGGTTTGGAAC
CGCTCAAACACAAGAGATTAATCTGTTGTATGAATCGTGGGTCGTTGTCGATCAGTTGCTTCTAGGTTGGTTGTATAACTCGATGACCCCTGAGGTTGCTACTCAGGTTA
TGGGCTTCGAAAGTGCTAAAGAACTATGGGAGGAAGTTCAAGACTTATTCGACGTTCAGTCGCGTGCCGAAGAGGATTATTTGCGCCAAGTGTTTCAGCAGTGCAGAAAG
GGGAGTCTGAAGATGGCAGATTACCTTCGAGTGATGAAGGCAGACTACCTTCGAGTGATGAAGAGCCACGTCGACAATCTAGGTTAG
Protein sequenceShow/hide protein sequence
MKSCPPKFTQPVATSVAPSEGAGATSSEDVASIGFGTAQTQEINLLYESWVVVDQLLLGWLYNSMTPEVATQVMGFESAKELWEEVQDLFDVQSRAEEDYLRQVFQQCRK
GSLKMADYLRVMKADYLRVMKSHVDNLG