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Lag0005959 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005959
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPolyprotein
Genome locationchr6:34571834..34572331
RNA-Seq ExpressionLag0005959
SyntenyLag0005959
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037023.1 hypothetical protein E6C27_scaffold86G001110 [Cucumis melo var. makuwa]7.3e-1081.82Show/hide
Query:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVE
        + +SPYKTIDEEKTK VGVREIKNIQQQLNYS+KVLT LS+S+E
Subjt:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVE

KAA0038280.1 polyprotein [Cucumis melo var. makuwa]1.5e-0768.09Show/hide
Query:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLK
        V +SPYKTIDE+K + VGVREIKNIQ QLNY NKVL+T+S+ VE ++
Subjt:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLK

KAA0039552.1 Peptidase_A3 domain-containing protein [Cucumis melo var. makuwa]7.1e-1369.23Show/hide
Query:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLKPSK-EKHIIPLNRLGLPK
        + +SPYKTIDEEKTK VGVREIKNIQQQ N SNK LTTLS+S+E +K  K EK + P  RLGLP+
Subjt:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLKPSK-EKHIIPLNRLGLPK

TYK14245.1 hypothetical protein E5676_scaffold1121G00290 [Cucumis melo var. makuwa]5.3e-0874.47Show/hide
Query:  SPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDL-KPS
        SPYKTIDE+K + VGVREIKNIQ QLNY+NK L+TLSK+VE + KPS
Subjt:  SPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDL-KPS

TYK22191.1 polyprotein [Cucumis melo var. makuwa]4.2e-1367.69Show/hide
Query:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLKPSK-EKHIIPLNRLGLPK
        + +SPYKTI+EEKTK +G+REIKNIQQQLNYSNKVLTTLS+S+E +KP K  K +  L   GLPK
Subjt:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLKPSK-EKHIIPLNRLGLPK

TrEMBL top hitse value%identityAlignment
A0A5A7T4I9 Polyprotein7.4e-0868.09Show/hide
Query:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLK
        V +SPYKTIDE+K + VGVREIKNIQ QLNY NKVL+T+S+ VE ++
Subjt:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLK

A0A5A7T7W5 Peptidase_A3 domain-containing protein3.4e-1369.23Show/hide
Query:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLKPSK-EKHIIPLNRLGLPK
        + +SPYKTIDEEKTK VGVREIKNIQQQ N SNK LTTLS+S+E +K  K EK + P  RLGLP+
Subjt:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLKPSK-EKHIIPLNRLGLPK

A0A5D3C641 Uncharacterized protein3.6e-1081.82Show/hide
Query:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVE
        + +SPYKTIDEEKTK VGVREIKNIQQQLNYS+KVLT LS+S+E
Subjt:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVE

A0A5D3CRM6 Uncharacterized protein2.5e-0874.47Show/hide
Query:  SPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDL-KPS
        SPYKTIDE+K + VGVREIKNIQ QLNY+NK L+TLSK+VE + KPS
Subjt:  SPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDL-KPS

A0A5D3DET5 Polyprotein2.0e-1367.69Show/hide
Query:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLKPSK-EKHIIPLNRLGLPK
        + +SPYKTI+EEKTK +G+REIKNIQQQLNYSNKVLTTLS+S+E +KP K  K +  L   GLPK
Subjt:  VYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLKPSK-EKHIIPLNRLGLPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACCACCGTTATTAGATTCTCAGAATCCAGAGTCCATACTGGAACACCAAACGACCCCTATGGCGTTTGCTTTGTTTATGCTTCTCCATACAAAACTATTGACGA
AGAGAAGACAAAGACTGTTGGAGTTAGAGAAATCAAGAATATCCAGCAGCAACTCAACTATTCAAATAAAGTCCTCACAACTTTATCAAAATCTGTTGAAGACCTGAAGC
CAAGCAAGGAAAAACATATTATTCCTCTTAACCGGCTAGGTCTACCAAAGTCGACCCTGACAGGCCGATTGTTCAATCCAACGCCTTGTCCAAGATTAGGGGTTTGGAGT
CAGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGACCACCGTTATTAGATTCTCAGAATCCAGAGTCCATACTGGAACACCAAACGACCCCTATGGCGTTTGCTTTGTTTATGCTTCTCCATACAAAACTATTGACGA
AGAGAAGACAAAGACTGTTGGAGTTAGAGAAATCAAGAATATCCAGCAGCAACTCAACTATTCAAATAAAGTCCTCACAACTTTATCAAAATCTGTTGAAGACCTGAAGC
CAAGCAAGGAAAAACATATTATTCCTCTTAACCGGCTAGGTCTACCAAAGTCGACCCTGACAGGCCGATTGTTCAATCCAACGCCTTGTCCAAGATTAGGGGTTTGGAGT
CAGTACTGA
Protein sequenceShow/hide protein sequence
MMTTVIRFSESRVHTGTPNDPYGVCFVYASPYKTIDEEKTKTVGVREIKNIQQQLNYSNKVLTTLSKSVEDLKPSKEKHIIPLNRLGLPKSTLTGRLFNPTPCPRLGVWS
QY