; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0005969 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005969
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr6:34755312..34755728
RNA-Seq ExpressionLag0005969
SyntenyLag0005969
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]7.4e-2856.76Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M LG   L+ S  PLVGFGGE+V   G +E PVTFG G + VT+M++ LVV+    YNAILGRPT+H L+A+ STYHQ +KFPT  GVG + GEQ++SRE
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDR
        CY+ ++R+ DR
Subjt:  CYFMALRNVDR

XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]5.6e-2854.05Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M LG + L+ SLTPL+GFGGE++  +G +ELP+TF    + +TRM++FLVVD    YN IL RPT+H L+A+ STYHQ +KFPT  GVG + GEQ++SRE
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDR
        CY+ ++R  D+
Subjt:  CYFMALRNVDR

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]1.1e-2859.46Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M LG   L+ S  PLVGFGGE+V   G +ELPVTFG G + VT+M++FLVV+    YNAILGRPT+H LKA+ STYHQ  KFPT  GVG + GEQ++SRE
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDR
        CY  ++R+ DR
Subjt:  CYFMALRNVDR

XP_023897071.1 uncharacterized protein LOC112008938 [Quercus suber]7.4e-2859.13Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M+LG D LRP+ +PLVGFGG KV   GSV LPVT G   Q VT+ +NFLVVDC   YNAI+GRPTL+  KA+ STYH  +KFPTE G G V+G+Q  +RE
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDRKVQA
        CY +A+   D +VQA
Subjt:  CYFMALRNVDRKVQA

XP_023903529.1 uncharacterized protein LOC112015361 [Quercus suber]7.4e-2859.13Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M+LG D LRP+ +PLVGFGG KV   GSV LPVT G   Q VT+ +NFLVVDC   YNAI+GRPTL+  KA+ STYH  +KFPTE G G V+G+Q  +RE
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDRKVQA
        CY +A+   D +VQA
Subjt:  CYFMALRNVDRKVQA

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141473.6e-2856.76Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M LG   L+ S  PLVGFGGE+V   G +E PVTFG G + VT+M++ LVV+    YNAILGRPT+H L+A+ STYHQ +KFPT  GVG + GEQ++SRE
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDR
        CY+ ++R+ DR
Subjt:  CYFMALRNVDR

A0A6J1CZ14 uncharacterized protein LOC1110159012.7e-2854.05Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M LG + L+ SLTPL+GFGGE++  +G +ELP+TF    + +TRM++FLVVD    YN IL RPT+H L+A+ STYHQ +KFPT  GVG + GEQ++SRE
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDR
        CY+ ++R  D+
Subjt:  CYFMALRNVDR

A0A6J1DAK4 uncharacterized protein LOC1110189022.3e-2752.89Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M LG   L+ S  PLVGFGGE V   G +ELPVTFG G + +T+M++FLVVD     NAILGRPT+H LKA+ S YHQ +KFPT  G+G + GEQ++SRE
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDRKVQATSASGD
        CY+ +++  D+     S +GD
Subjt:  CYFMALRNVDRKVQATSASGD

A0A6J1DQY2 uncharacterized protein LOC1110223215.5e-2959.46Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M LG   L+ S  PLVGFGGE+V   G +ELPVTFG G + VT+M++FLVV+    YNAILGRPT+H LKA+ STYHQ  KFPT  GVG + GEQ++SRE
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDR
        CY  ++R+ DR
Subjt:  CYFMALRNVDR

A0A6J1DV51 uncharacterized protein LOC1110246621.0e-2752.54Show/hide
Query:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE
        M LG   L+ +L PLVGFGGE+V  +  ++LPVTFG G + +T+++ FLVVD    YNAILGRPT+H LKA+ STYH+ LKFPT+ G+  V GEQ++S E
Subjt:  MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRE

Query:  CYFMALRNVDRKVQATSA
        CY+ +LR  D   +A+++
Subjt:  CYFMALRNVDRKVQATSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGGGAAACGATCGCCTGAGGCCGAGCCTCACGCCGCTGGTGGGGTTTGGCGGAGAAAAAGTAAGCTCGAGAGGAAGCGTCGAACTGCCAGTGACGTTTGGGGA
AGGATTGCAGATAGTAACAAGAATGATCAACTTTTTAGTGGTAGATTGCGTCCCTGTGTATAATGCCATCTTGGGACGACCCACCCTGCATGGACTTAAGGCTGTAGCCT
CAACCTACCACCAAGTCCTGAAATTCCCAACTGAAGAAGGTGTAGGAGCGGTGTATGGCGAGCAGAAGATGTCGAGGGAATGCTACTTTATGGCACTCAGGAACGTCGAC
AGAAAGGTTCAAGCAACGTCGGCCTCGGGAGATGGCCGAGGCCGAGCATTTGAGGGAGCAAGCTATCCCCTTCCAATGGAGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTGGGAAACGATCGCCTGAGGCCGAGCCTCACGCCGCTGGTGGGGTTTGGCGGAGAAAAAGTAAGCTCGAGAGGAAGCGTCGAACTGCCAGTGACGTTTGGGGA
AGGATTGCAGATAGTAACAAGAATGATCAACTTTTTAGTGGTAGATTGCGTCCCTGTGTATAATGCCATCTTGGGACGACCCACCCTGCATGGACTTAAGGCTGTAGCCT
CAACCTACCACCAAGTCCTGAAATTCCCAACTGAAGAAGGTGTAGGAGCGGTGTATGGCGAGCAGAAGATGTCGAGGGAATGCTACTTTATGGCACTCAGGAACGTCGAC
AGAAAGGTTCAAGCAACGTCGGCCTCGGGAGATGGCCGAGGCCGAGCATTTGAGGGAGCAAGCTATCCCCTTCCAATGGAGCATTGA
Protein sequenceShow/hide protein sequence
MKLGNDRLRPSLTPLVGFGGEKVSSRGSVELPVTFGEGLQIVTRMINFLVVDCVPVYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALRNVD
RKVQATSASGDGRGRAFEGASYPLPMEH