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Lag0005991 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0005991
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag-Pol polyprotein
Genome locationchr6:35269917..35270619
RNA-Seq ExpressionLag0005991
SyntenyLag0005991
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023874613.1 uncharacterized protein LOC111987139 [Quercus suber]2.2e-1533.63Show/hide
Query:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE
        NHENFSY NTKNVLQPPPGF  S   EKK +LE+ +  F++E K                                 +A+ +NA Q+G FPS+TE NP+E
Subjt:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE

Query:  QCKMVTLRSGRQLEVSSEKKKEEKSKDEDGRTEAQKASSERSQYPPNSIDLNCDFSNNFVGREEDKKKQNERHEEKLSEEEVVPCNHHDKGSHIIPPRRR
        QCK +TLRSGR++E S  K+                  +E +   PN+            G+ ++K ++ E  E+ L E ++ P       S   P    
Subjt:  QCKMVTLRSGRQLEVSSEKKKEEKSKDEDGRTEAQKASSERSQYPPNSIDLNCDFSNNFVGREEDKKKQNERHEEKLSEEEVVPCNHHDKGSHIIPPRRR

Query:  GECPTFDYRELPFPQRFKNVKLD
         + P      LP+PQRF+  KLD
Subjt:  GECPTFDYRELPFPQRFKNVKLD

XP_023889786.1 uncharacterized protein LOC112001854 [Quercus suber]1.5e-1440.71Show/hide
Query:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE
        NHENFSY NTKNVLQPPPGF  S   EKK +LE+ +  F++E K                                 +A+ +NA Q+G FPS+TE NP+E
Subjt:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE

Query:  QCKMVTLRSGRQLEVSSEKKKEEKSKDEDGRTEAQKASSE
        QCK +TLRSGR++E S  K+ E  S   +      K   E
Subjt:  QCKMVTLRSGRQLEVSSEKKKEEKSKDEDGRTEAQKASSE

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]1.2e-1338.06Show/hide
Query:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE
        NHENFSY NTKNVLQPPPGF  S   EKK +LE+ +  F++E K                                 +A+ +NA Q+G FPS+TE NP+E
Subjt:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE

Query:  QCKMVTLRSGRQLEVSSEKKKEE--------KSKDEDGRTEAQKASSERSQYPPN
        QCK +TLRSGR++E S  K+ E         +SK++    E  + +   +  PP+
Subjt:  QCKMVTLRSGRQLEVSSEKKKEE--------KSKDEDGRTEAQKASSERSQYPPN

XP_023929660.1 uncharacterized protein LOC112040975 [Quercus suber]6.5e-1544.26Show/hide
Query:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE
        NHENFSY NTKNVLQPPPGF  S   EKK +LE+ +  F++E K                                 +A+ +NA Q+G FPS+TE NP+E
Subjt:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE

Query:  QCKMVTLRSGRQLEVSSEKKKE
        QCK +TLRSGR++E S  K+ E
Subjt:  QCKMVTLRSGRQLEVSSEKKKE

XP_030941443.1 uncharacterized protein LOC115966335 [Quercus lobata]6.1e-1334.21Show/hide
Query:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE
        NHENFSY NTKNVLQPPPGF  S   EKK +LE+ +  F++E K                                 +A+ +NA Q+G FPS+TE NP+E
Subjt:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE

Query:  QCKMVTLRSGRQLEVSSEKKKEE--------KSKDEDGRTEAQKASSERSQYPP--NSIDLNCDFSNNFVGREEDKKKQNERHEEKLSEE
        +CK +TLRSGR++E +  K+ E         +SK++    E    +   +  PP  + +  N  F  + + +   K++ ++    KLSEE
Subjt:  QCKMVTLRSGRQLEVSSEKKKEE--------KSKDEDGRTEAQKASSERSQYPP--NSIDLNCDFSNNFVGREEDKKKQNERHEEKLSEE

TrEMBL top hitse value%identityAlignment
A0A2I4G4Q3 uncharacterized protein LOC1090047122.1e-1139.61Show/hide
Query:  NHENFSYSNTKNVL--QPPPGFASSSMPEKKSNLEEMVAMFIKEQ----------------------------------KIASVVNALQKGKFPSDTETN
        NHEN SY NTKNVL  QPPPGF S S  EKK +LE+ +  FI+E                                   ++A+ +NA Q+G FPS+TE N
Subjt:  NHENFSYSNTKNVL--QPPPGFASSSMPEKKSNLEEMVAMFIKEQ----------------------------------KIASVVNALQKGKFPSDTETN

Query:  PREQCKMVTLRSGRQLEVSSEKKKEEKSKDEDGRTEAQKASSERS-QYPPNSID
        PREQCK + LRSGR+LE   E        +E  +T      +ERS +YP  +I+
Subjt:  PREQCKMVTLRSGRQLEVSSEKKKEEKSKDEDGRTEAQKASSERS-QYPPNSID

A0A2P5AMA4 Uncharacterized protein7.5e-0934.81Show/hide
Query:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------IASVVNALQKG------------------KFPSDTETNPRE
        NHENFSY+N +NVLQPP GF +  + EKK +L+++++ FI E K                 + +NA  K                   KFPSDTETNP++
Subjt:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------IASVVNALQKG------------------KFPSDTETNPRE

Query:  QCKMVTLRSGRQLEVSSEKKKE-EKSKDEDGRTEAQKASSERS-QYPPNSIDLNCDFS
         CK +TLRS +++EV  +K    +K+K++ G   ++  S  +S  +P N   +N   S
Subjt:  QCKMVTLRSGRQLEVSSEKKKE-EKSKDEDGRTEAQKASSERS-QYPPNSIDLNCDFS

A0A2P5B1T0 Uncharacterized protein6.8e-1038.6Show/hide
Query:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK------------------------------IASVVNALQ---KGKFPSDTETNPRE
        NHENFSY+N +NVLQPP G  + S+ EKK +LE++++ FI E +                              I  + N+++    GKFP+DTETNP+ 
Subjt:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK------------------------------IASVVNALQ---KGKFPSDTETNPRE

Query:  QCKMVTLRSGRQLE
         CK +TLRSG+++E
Subjt:  QCKMVTLRSGRQLE

A0A2P5BPI6 Uncharacterized protein1.9e-1238.73Show/hide
Query:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE
        NHENFSY NT+NVLQPPPGF +  + EKKS+LE++++ FI E +                                 +A+ +   Q GKFPSDTETNP++
Subjt:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQK---------------------------------IASVVNALQKGKFPSDTETNPRE

Query:  QCKMVTLRSGRQLEVSSEKKKEEKSKDEDGRTEAQKASSERS
         CK +TLR+G+++EVS  K+       E+   E  K  S+ S
Subjt:  QCKMVTLRSGRQLEVSSEKKKEEKSKDEDGRTEAQKASSERS

A0A6P9DWY0 uncharacterized protein LOC1183440268.6e-1343.1Show/hide
Query:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQ---------------------------------KIASVVNALQKGKFPSDTETNPRE
        NHEN SY NTKNVLQP PGF  S   EKK +LE+ +  F++E                                  ++A+ +NA Q+G FPS+TE NPRE
Subjt:  NHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQ---------------------------------KIASVVNALQKGKFPSDTETNPRE

Query:  QCKMVTLRSGRQLEVS
        QCK +TLRSGR+L+ S
Subjt:  QCKMVTLRSGRQLEVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGAAGTTCAGTATGTGGGAAATAGAGCATTCATTCAAGGAGTACCGAACTTCTACCATCCAGTCTGCCAATCATGAGAACTTTTCTTATTCGAACACCAAGAA
CGTATTGCAGCCACCACCAGGATTTGCTTCATCCAGTATGCCAGAAAAGAAAAGTAACCTGGAGGAGATGGTGGCCATGTTTATCAAGGAACAGAAGATCGCTTCAGTAG
TGAATGCCCTTCAGAAAGGGAAGTTTCCAAGCGACACAGAAACGAATCCTAGAGAGCAGTGCAAGATGGTGACACTGAGAAGTGGTAGACAGCTGGAGGTCAGTTCAGAG
AAGAAGAAAGAAGAGAAGAGTAAGGATGAAGATGGAAGGACTGAGGCACAAAAAGCCTCCTCTGAAAGGTCCCAATATCCTCCTAACTCTATTGATTTGAATTGTGATTT
TTCTAACAATTTTGTAGGAAGAGAAGAAGATAAGAAGAAACAGAATGAAAGGCATGAAGAGAAGCTGAGCGAGGAAGAAGTGGTCCCATGCAACCACCATGATAAAGGAT
CGCACATTATCCCGCCCAGGAGGAGGGGCGAATGTCCTACCTTTGACTACAGGGAGTTACCTTTTCCTCAACGTTTTAAAAATGTTAAATTGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGAAGTTCAGTATGTGGGAAATAGAGCATTCATTCAAGGAGTACCGAACTTCTACCATCCAGTCTGCCAATCATGAGAACTTTTCTTATTCGAACACCAAGAA
CGTATTGCAGCCACCACCAGGATTTGCTTCATCCAGTATGCCAGAAAAGAAAAGTAACCTGGAGGAGATGGTGGCCATGTTTATCAAGGAACAGAAGATCGCTTCAGTAG
TGAATGCCCTTCAGAAAGGGAAGTTTCCAAGCGACACAGAAACGAATCCTAGAGAGCAGTGCAAGATGGTGACACTGAGAAGTGGTAGACAGCTGGAGGTCAGTTCAGAG
AAGAAGAAAGAAGAGAAGAGTAAGGATGAAGATGGAAGGACTGAGGCACAAAAAGCCTCCTCTGAAAGGTCCCAATATCCTCCTAACTCTATTGATTTGAATTGTGATTT
TTCTAACAATTTTGTAGGAAGAGAAGAAGATAAGAAGAAACAGAATGAAAGGCATGAAGAGAAGCTGAGCGAGGAAGAAGTGGTCCCATGCAACCACCATGATAAAGGAT
CGCACATTATCCCGCCCAGGAGGAGGGGCGAATGTCCTACCTTTGACTACAGGGAGTTACCTTTTCCTCAACGTTTTAAAAATGTTAAATTGGATTAA
Protein sequenceShow/hide protein sequence
MSKKFSMWEIEHSFKEYRTSTIQSANHENFSYSNTKNVLQPPPGFASSSMPEKKSNLEEMVAMFIKEQKIASVVNALQKGKFPSDTETNPREQCKMVTLRSGRQLEVSSE
KKKEEKSKDEDGRTEAQKASSERSQYPPNSIDLNCDFSNNFVGREEDKKKQNERHEEKLSEEEVVPCNHHDKGSHIIPPRRRGECPTFDYRELPFPQRFKNVKLD