; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006000 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006000
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGirdin-like
Genome locationchr6:35492413..35495560
RNA-Seq ExpressionLag0006000
SyntenyLag0006000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]9.6e-2664.71Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED
        ++ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY  ED
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED

KAA0044912.1 girdin-like [Cucumis melo var. makuwa]9.6e-2664.71Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED
        ++ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY  ED
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED

KAA0046902.1 girdin-like [Cucumis melo var. makuwa]1.3e-2560.22Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSY---SCEDSNCNA
        ++ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY    C+   C A
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSY---SCEDSNCNA

TYK16558.1 girdin-like [Cucumis melo var. makuwa]9.6e-2664.71Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED
        ++ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY  ED
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED

TYK23955.1 girdin-like [Cucumis melo var. makuwa]3.3e-2665.88Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED
        S+ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY  ED
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED

TrEMBL top hitse value%identityAlignment
A0A5A7T5S7 Girdin-like4.7e-2664.71Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED
        ++ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY  ED
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED

A0A5A7TNJ1 Girdin-like4.7e-2664.71Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED
        ++ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY  ED
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED

A0A5D3BYI1 Girdin-like6.1e-2660.22Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSY---SCEDSNCNA
        ++ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY    C+   C A
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSY---SCEDSNCNA

A0A5D3CZ50 Girdin-like4.7e-2664.71Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED
        ++ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY  ED
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED

A0A5D3DK34 Girdin-like1.6e-2665.88Show/hide
Query:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED
        S+ RKEAW+SFF+    E+VIWKA WMPLKA+IYRCG FH+VPL+GPWG V+Y PLL LRQ W KQFI  TH L + +FSY  ED
Subjt:  SFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTAAGTTTTTCGAGGAAAGAAGCATGGGTGTCCTTCTTTTCGAATTCCAAATTAGAGCATGTGATTTGGAAGGCACATTGGATGCCCCTAAAAGCCTTAATCTA
CAGATGCGGGAGCTTCCACACAGTTCCTTTAGTAGGCCCTTGGGGATGCGTCCATTATGCTCCGTTGTTGGCCTTGCGGCAAAGTTGGTTTAAACAGTTCATAACAGCAA
CTCATGGTCTGCATAAATTAGAATTTTCCTACAGTTGCGAGGATTCTAACTGTAACGCCCCGAATTTCAGCGTCCAGCGTAGGCCGTCACCGTCGTGTGGTTCCAGCTCT
CCGTTGCGCGTCGCTTGTCGAAATCGTCTCGCGCGTTCCATAGCTACTGTTCGAGTTGTTGTCGCCGTCGCACGTCATTGGAGTTCAGCAGTTTTCAGCCTTAATCAGTC
GTTCCCGACGTTCAAGCTTCGATACTCAGCCATTTACGCTATTGTCCAGCGAAGTGACTTTAGTTTGGGTAAGAGTTTAGCTATTCAGAGGTGTCGTCCAATAGAGGTTA
AGGCTAGTTTTCGAGTGGGTCTTTGTGTTGTGTACTTTATTTTGGCTAAGGACGAGGTAAGTGACCTTACTACTAAGAGGCTTATGCTAGGTTGGGAATTGTGTGCTGAT
AGCATAAGCTTCATGTGTGAACTTTTCATATGTAAAGGCAAAGGCGTCAAGGCGATTGACAGAGGTGGTCGGATAGCCATGGGAGACAGTAGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTAAGTTTTTCGAGGAAAGAAGCATGGGTGTCCTTCTTTTCGAATTCCAAATTAGAGCATGTGATTTGGAAGGCACATTGGATGCCCCTAAAAGCCTTAATCTA
CAGATGCGGGAGCTTCCACACAGTTCCTTTAGTAGGCCCTTGGGGATGCGTCCATTATGCTCCGTTGTTGGCCTTGCGGCAAAGTTGGTTTAAACAGTTCATAACAGCAA
CTCATGGTCTGCATAAATTAGAATTTTCCTACAGTTGCGAGGATTCTAACTGTAACGCCCCGAATTTCAGCGTCCAGCGTAGGCCGTCACCGTCGTGTGGTTCCAGCTCT
CCGTTGCGCGTCGCTTGTCGAAATCGTCTCGCGCGTTCCATAGCTACTGTTCGAGTTGTTGTCGCCGTCGCACGTCATTGGAGTTCAGCAGTTTTCAGCCTTAATCAGTC
GTTCCCGACGTTCAAGCTTCGATACTCAGCCATTTACGCTATTGTCCAGCGAAGTGACTTTAGTTTGGGTAAGAGTTTAGCTATTCAGAGGTGTCGTCCAATAGAGGTTA
AGGCTAGTTTTCGAGTGGGTCTTTGTGTTGTGTACTTTATTTTGGCTAAGGACGAGGTAAGTGACCTTACTACTAAGAGGCTTATGCTAGGTTGGGAATTGTGTGCTGAT
AGCATAAGCTTCATGTGTGAACTTTTCATATGTAAAGGCAAAGGCGTCAAGGCGATTGACAGAGGTGGTCGGATAGCCATGGGAGACAGTAGAAGATGA
Protein sequenceShow/hide protein sequence
MELSFSRKEAWVSFFSNSKLEHVIWKAHWMPLKALIYRCGSFHTVPLVGPWGCVHYAPLLALRQSWFKQFITATHGLHKLEFSYSCEDSNCNAPNFSVQRRPSPSCGSSS
PLRVACRNRLARSIATVRVVVAVARHWSSAVFSLNQSFPTFKLRYSAIYAIVQRSDFSLGKSLAIQRCRPIEVKASFRVGLCVVYFILAKDEVSDLTTKRLMLGWELCAD
SISFMCELFICKGKGVKAIDRGGRIAMGDSRR