; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006003 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006003
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:35534724..35535191
RNA-Seq ExpressionLag0006003
SyntenyLag0006003
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG73522.1 hypothetical protein EZV62_002101 [Acer yangbiense]9.2e-1940Show/hide
Query:  LCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVLVNY
        L +V KV+ SK VN +AFR VM+ VWRV     +E+  +NVF  QFK    + RV+S  PW FDK+L+V+  P    +I +M+F+    WVQ+HN+ +  
Subjt:  LCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVLVNY

Query:  MTVEMAKLVGDVVGTVEEIDGDGGE
        M+ E+   +G+++G V  +D + G+
Subjt:  MTVEMAKLVGDVVGTVEEIDGDGGE

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]5.4e-2744.36Show/hide
Query:  VFECKDIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQ
        +    ++ LC+V K+ +SK+++ +A RSVM+SVWRVH++TR E    N++ + FK+  EK+RV+SS PWTF+KSL+V+ SP   +Q +DM F+    W+Q
Subjt:  VFECKDIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQ

Query:  VHNVLVNYMTVEMAKLVGDVVGTVEEIDGDGGE
        +HN+    ++ EMA ++G  +G VEEI+GDG +
Subjt:  VHNVLVNYMTVEMAKLVGDVVGTVEEIDGDGGE

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.2e-2145Show/hide
Query:  VTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVLVNYMTV
        V K+ +SK+++ +AFRSVM+S+W+VH +T +E+A  N++ + FK+  EK RV++S PW+F+ SL+V+ SP   DQ  DM F+   LW+Q+H +    M  
Subjt:  VTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVLVNYMTV

Query:  EMAKLVGDVVGTVEEIDGDG
        +MAK +G  +G VEEID +G
Subjt:  EMAKLVGDVVGTVEEIDGDG

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.8e-2243.55Show/hide
Query:  DIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVL
        +I LC V K+  SK++  +AF SVM+ VW++H++TR+E+A  N++ + FKT  EK RV S  PWTFDKSL++++     ++ +D+  S    WVQ+H + 
Subjt:  DIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVL

Query:  VNYMTVEMAKLVGDVVGTVEEIDG
           MT +MAK +G  +G VEE+DG
Subjt:  VNYMTVEMAKLVGDVVGTVEEIDG

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]4.5e-2646.09Show/hide
Query:  VFECKDIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQ
        +   ++I LC V K+ +SK+++  A  SVM+ VW++H +TR+E+A  N++ + FKT +EK RV+SS PWTFDKSL V++SP   D+ +D+ F     WVQ
Subjt:  VFECKDIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQ

Query:  VHNVLVNYMTVEMAKLVGDVVGTVEEID
        +H +   Y+T +MAKL+GD +G VEE+D
Subjt:  VHNVLVNYMTVEMAKLVGDVVGTVEEID

TrEMBL top hitse value%identityAlignment
A0A5C7IY45 CCHC-type domain-containing protein4.4e-1940Show/hide
Query:  LCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVLVNY
        L +V KV+ SK VN +AFR VM+ VWRV     +E+  +NVF  QFK    + RV+S  PW FDK+L+V+  P    +I +M+F+    WVQ+HN+ +  
Subjt:  LCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVLVNY

Query:  MTVEMAKLVGDVVGTVEEIDGDGGE
        M+ E+   +G+++G V  +D + G+
Subjt:  MTVEMAKLVGDVVGTVEEIDGDGGE

A0A6J1D765 uncharacterized protein LOC1110179022.6e-2744.36Show/hide
Query:  VFECKDIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQ
        +    ++ LC+V K+ +SK+++ +A RSVM+SVWRVH++TR E    N++ + FK+  EK+RV+SS PWTF+KSL+V+ SP   +Q +DM F+    W+Q
Subjt:  VFECKDIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQ

Query:  VHNVLVNYMTVEMAKLVGDVVGTVEEIDGDGGE
        +HN+    ++ EMA ++G  +G VEEI+GDG +
Subjt:  VHNVLVNYMTVEMAKLVGDVVGTVEEIDGDGGE

A0A6J1DP89 uncharacterized protein LOC1110229325.6e-2245Show/hide
Query:  VTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVLVNYMTV
        V K+ +SK+++ +AFRSVM+S+W+VH +T +E+A  N++ + FK+  EK RV++S PW+F+ SL+V+ SP   DQ  DM F+   LW+Q+H +    M  
Subjt:  VTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVLVNYMTV

Query:  EMAKLVGDVVGTVEEIDGDG
        +MAK +G  +G VEEID +G
Subjt:  EMAKLVGDVVGTVEEIDGDG

A0A6J1DVS4 uncharacterized protein LOC1110235558.6e-2343.55Show/hide
Query:  DIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVL
        +I LC V K+  SK++  +AF SVM+ VW++H++TR+E+A  N++ + FKT  EK RV S  PWTFDKSL++++     ++ +D+  S    WVQ+H + 
Subjt:  DIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQVHNVL

Query:  VNYMTVEMAKLVGDVVGTVEEIDG
           MT +MAK +G  +G VEE+DG
Subjt:  VNYMTVEMAKLVGDVVGTVEEIDG

A0A6J1DYG3 uncharacterized protein LOC1110246762.2e-2646.09Show/hide
Query:  VFECKDIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQ
        +   ++I LC V K+ +SK+++  A  SVM+ VW++H +TR+E+A  N++ + FKT +EK RV+SS PWTFDKSL V++SP   D+ +D+ F     WVQ
Subjt:  VFECKDIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIVDMKFSEETLWVQ

Query:  VHNVLVNYMTVEMAKLVGDVVGTVEEID
        +H +   Y+T +MAKL+GD +G VEE+D
Subjt:  VHNVLVNYMTVEMAKLVGDVVGTVEEID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGTGGGATCTAATAGAGAAGGAGGGGAAGGTTATCGAAGCGGTAGATGGGAATGTGTTGTTTTCGAATGTAAGGATATTGACTTGTGTATAGTCACAAAAGT
GATCTCAAGCAAGAAGGTAAACTGTGATGCTTTTAGATCTGTTATGAGGTCAGTTTGGAGGGTACACCATAATACGAGGGTCGAGTCTGCTAGAAATAATGTCTTCTTTG
TCCAGTTTAAGACTAAAATGGAAAAGGCGAGGGTTATAAGTTCAGACCCCTGGACTTTTGACAAATCACTTATAGTTATGATATCACCAAAGGAGAATGATCAGATTGTT
GATATGAAATTTAGTGAAGAGACATTATGGGTTCAGGTTCATAATGTGCTCGTGAATTACATGACTGTGGAGATGGCTAAACTAGTAGGAGACGTAGTGGGGACTGTGGA
AGAGATAGATGGGGATGGGGGAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGTGGGATCTAATAGAGAAGGAGGGGAAGGTTATCGAAGCGGTAGATGGGAATGTGTTGTTTTCGAATGTAAGGATATTGACTTGTGTATAGTCACAAAAGT
GATCTCAAGCAAGAAGGTAAACTGTGATGCTTTTAGATCTGTTATGAGGTCAGTTTGGAGGGTACACCATAATACGAGGGTCGAGTCTGCTAGAAATAATGTCTTCTTTG
TCCAGTTTAAGACTAAAATGGAAAAGGCGAGGGTTATAAGTTCAGACCCCTGGACTTTTGACAAATCACTTATAGTTATGATATCACCAAAGGAGAATGATCAGATTGTT
GATATGAAATTTAGTGAAGAGACATTATGGGTTCAGGTTCATAATGTGCTCGTGAATTACATGACTGTGGAGATGGCTAAACTAGTAGGAGACGTAGTGGGGACTGTGGA
AGAGATAGATGGGGATGGGGGAGAATAG
Protein sequenceShow/hide protein sequence
MEDVGSNREGGEGYRSGRWECVVFECKDIDLCIVTKVISSKKVNCDAFRSVMRSVWRVHHNTRVESARNNVFFVQFKTKMEKARVISSDPWTFDKSLIVMISPKENDQIV
DMKFSEETLWVQVHNVLVNYMTVEMAKLVGDVVGTVEEIDGDGGE