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Lag0006009 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006009
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr6:35630912..35631430
RNA-Seq ExpressionLag0006009
SyntenyLag0006009
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB63567.1 hypothetical protein L484_026905 [Morus notabilis]5.8e-0628.67Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQA-TPSSGLSPASPP
        +L + +MKG  +N+G +I +++  C   + G L+F SLITQLC    +   K E +      I   ++ +L  ++AQ ++ A    A  P  G   A P 
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQA-TPSSGLSPASPP

Query:  QLTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAYAKERDEAI
             + LS   + ++ V  Q  +    +R +W Y K+RD A+
Subjt:  QLTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAYAKERDEAI

MCI09484.1 hypothetical protein [Trifolium medium]7.6e-0631.65Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKA--GKLFFGSLITQLCHRVKI-VPGKDEKRHFFKPT--IDLPIIGKLQQNNAQRKDKASTSQATPSSGLSP
        +L + I+ G +IN+G II +EI++C  KK+  G L+F  LIT+LC +  + V G+DE    F+PT   D   I  L + N  RK +    +AT S+    
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKA--GKLFFGSLITQLCHRVKI-VPGKDEKRHFFKPT--IDLPIIGKLQQNNAQRKDKASTSQATPSSGLSP

Query:  ASPPQLTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAY
                      ++ + A+   +  + R N++TYWA+
Subjt:  ASPPQLTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAY

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.3e-0725.44Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQATPSSGLSPASPPQ
        +L +S++ G  IN+G +I  EI +C  +K G LFF SLIT+LC   +     +E++      ID   + ++ Q       +  +S    ++  +  +   
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQATPSSGLSPASPPQ

Query:  LTPFSGLSPSSEAIAI----VYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL
        L     L        +    + + L       + +WAY+KERD A+++   +      P F  FPQ +L
Subjt:  LTPFSGLSPSSEAIAI----VYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]3.0e-1030.59Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKL-QQNNAQRKDKASTSQATPSSGLSPASPP
        +L YS++ G  IN+G +I  EI +C  +K+G LFF SLITQLC   +     +E++      ID   + ++ Q+   +   + STS+ T +S  S A+  
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKL-QQNNAQRKDKASTSQATPSSGLSPASPP

Query:  QLTPFSGLSPSSEAIAI----VYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL
         L     L        +    + + L       + +WAY+KERD A+++   +      P F  FPQ LL
Subjt:  QLTPFSGLSPSSEAIAI----VYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.1e-0830.91Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQATPSSGLSPASPPQ
        +L +S++ G  IN+G +I  EI +C  +K G LFF SLIT+LC     +   +EK H     ID   + ++ Q         ST Q  PSS   PA+   
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQATPSSGLSPASPPQ

Query:  LTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL
              +    +A+    +Q +      + +WAY+KERD A+++   +      P F  FPQ +L
Subjt:  LTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.1e-0725.44Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQATPSSGLSPASPPQ
        +L +S++ G  IN+G +I  EI +C  +K G LFF SLIT+LC   +     +E++      ID   + ++ Q       +  +S    ++  +  +   
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQATPSSGLSPASPPQ

Query:  LTPFSGLSPSSEAIAI----VYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL
        L     L        +    + + L       + +WAY+KERD A+++   +      P F  FPQ +L
Subjt:  LTPFSGLSPSSEAIAI----VYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL

A0A2P5CEY2 Uncharacterized protein1.4e-1030.59Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKL-QQNNAQRKDKASTSQATPSSGLSPASPP
        +L YS++ G  IN+G +I  EI +C  +K+G LFF SLITQLC   +     +E++      ID   + ++ Q+   +   + STS+ T +S  S A+  
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKL-QQNNAQRKDKASTSQATPSSGLSPASPP

Query:  QLTPFSGLSPSSEAIAI----VYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL
         L     L        +    + + L       + +WAY+KERD A+++   +      P F  FPQ LL
Subjt:  QLTPFSGLSPSSEAIAI----VYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL

A0A2P5DXM3 Uncharacterized protein1.0e-0830.91Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQATPSSGLSPASPPQ
        +L +S++ G  IN+G +I  EI +C  +K G LFF SLIT+LC     +   +EK H     ID   + ++ Q         ST Q  PSS   PA+   
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQATPSSGLSPASPPQ

Query:  LTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL
              +    +A+    +Q +      + +WAY+KERD A+++   +      P F  FPQ +L
Subjt:  LTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLL

A0A392PCH7 Uncharacterized protein3.7e-0631.65Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKA--GKLFFGSLITQLCHRVKI-VPGKDEKRHFFKPT--IDLPIIGKLQQNNAQRKDKASTSQATPSSGLSP
        +L + I+ G +IN+G II +EI++C  KK+  G L+F  LIT+LC +  + V G+DE    F+PT   D   I  L + N  RK +    +AT S+    
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKA--GKLFFGSLITQLCHRVKI-VPGKDEKRHFFKPT--IDLPIIGKLQQNNAQRKDKASTSQATPSSGLSP

Query:  ASPPQLTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAY
                      ++ + A+   +  + R N++TYWA+
Subjt:  ASPPQLTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAY

W9RPD1 Uncharacterized protein2.8e-0628.67Show/hide
Query:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQA-TPSSGLSPASPP
        +L + +MKG  +N+G +I +++  C   + G L+F SLITQLC    +   K E +      I   ++ +L  ++AQ ++ A    A  P  G   A P 
Subjt:  MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQA-TPSSGLSPASPP

Query:  QLTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAYAKERDEAI
             + LS   + ++ V  Q  +    +R +W Y K+RD A+
Subjt:  QLTPFSGLSPSSEAIAIVYNQLDQIRDNLRTYWAYAKERDEAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCACTACAGTATCATGAAGGGGTTGGAGATAAATATTGGGAGCATCATCAGGGAGGAAATCCTTTCGTGTGGAAGGAAGAAAGCAGGGAAGCTTTTCTTTGGGTC
ACTTATCACCCAATTATGTCATAGGGTAAAGATAGTTCCTGGAAAGGATGAAAAACGTCACTTCTTCAAGCCTACCATCGATTTACCTATAATTGGGAAGCTCCAACAGA
ACAATGCCCAAAGGAAGGACAAAGCTTCCACATCTCAAGCCACCCCATCATCGGGGCTGAGTCCGGCTTCACCACCTCAACTCACTCCTTTTTCAGGGCTCTCACCATCA
TCAGAGGCCATAGCAATTGTCTATAACCAACTAGACCAAATCAGGGATAACCTGAGGACTTATTGGGCTTATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCA
CTCTATCACCCCGAGTATTGCTCCTGTCTTTTCTGACTTCCCTCAGTCGCTGCTGCCACGAGAAGAGAAAAGAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCACTACAGTATCATGAAGGGGTTGGAGATAAATATTGGGAGCATCATCAGGGAGGAAATCCTTTCGTGTGGAAGGAAGAAAGCAGGGAAGCTTTTCTTTGGGTC
ACTTATCACCCAATTATGTCATAGGGTAAAGATAGTTCCTGGAAAGGATGAAAAACGTCACTTCTTCAAGCCTACCATCGATTTACCTATAATTGGGAAGCTCCAACAGA
ACAATGCCCAAAGGAAGGACAAAGCTTCCACATCTCAAGCCACCCCATCATCGGGGCTGAGTCCGGCTTCACCACCTCAACTCACTCCTTTTTCAGGGCTCTCACCATCA
TCAGAGGCCATAGCAATTGTCTATAACCAACTAGACCAAATCAGGGATAACCTGAGGACTTATTGGGCTTATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTTACCA
CTCTATCACCCCGAGTATTGCTCCTGTCTTTTCTGACTTCCCTCAGTCGCTGCTGCCACGAGAAGAGAAAAGAATCTAA
Protein sequenceShow/hide protein sequence
MLHYSIMKGLEINIGSIIREEILSCGRKKAGKLFFGSLITQLCHRVKIVPGKDEKRHFFKPTIDLPIIGKLQQNNAQRKDKASTSQATPSSGLSPASPPQLTPFSGLSPS
SEAIAIVYNQLDQIRDNLRTYWAYAKERDEAIREFYHSITPSIAPVFSDFPQSLLPREEKRI