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Lag0006025 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006025
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Genome locationchr6:36106551..36106991
RNA-Seq ExpressionLag0006025
SyntenyLag0006025
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]4.4e-2339.58Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN
        FN+AL+AKQVWR+   P  L  +V++ +Y +  L+L A    N S FW+GF+W R+LL   +R +VGNG++I  F DPWIP+  +F+P+      +  D 
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN

Query:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI
        KV+D I P   W++  +     EE+   I S+P+S     D WI
Subjt:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]7.5e-2340.28Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN
        FN+AL+AK VWR    P  L  KV++ +Y     LL A      S FW+GF+W R+LL   +R +VGNG++I  F DPW+P+ TTFKPL+ +N     D 
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN

Query:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI
         V+ FIT    W++  +  +   E+   I S+PIS+   +D W+
Subjt:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI

XP_030477990.1 uncharacterized protein LOC115695032 [Cannabis sativa]1.1e-2141.67Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN
        FN+ALLAKQ WRLF  P SL Y+V++GRY  +   L A      SL W+G  W RELL+  +R QVGNG  I    DPWIP  +   P+    +     N
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN

Query:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI
         V+D+ITP   WN+ +L       +V  I S+P+S +   D W+
Subjt:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI

XP_030483769.1 uncharacterized protein LOC115700339 [Cannabis sativa]3.7e-2243.06Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN
        FN+ALLAKQ WR+F  P SL  +V++GRY      + A     CSL W+G VW RELL   +R +VG+G SI    D WIP    FK            N
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN

Query:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI
         VSD+ITP   WN+D L       +V  I +IP+S N  +D+WI
Subjt:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]4.9e-2239.86Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN
        FN+A LAKQ WR+F TP SL  +V++GRY +Q   + A V    SL W+G VW RELL   +  ++G+G  +    D WIP    FKPL+   +     N
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN

Query:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKW
         V+D+IT T  W+++ LH      ++  I +IP+S N   D+W
Subjt:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKW

TrEMBL top hitse value%identityAlignment
A0A6J1BRN0 uncharacterized protein LOC1110047872.1e-2339.58Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN
        FN+AL+AKQVWR+   P  L  +V++ +Y +  L+L A    N S FW+GF+W R+LL   +R +VGNG++I  F DPWIP+  +F+P+      +  D 
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN

Query:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI
        KV+D I P   W++  +     EE+   I S+P+S     D WI
Subjt:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI

A0A6J1DX30 uncharacterized protein LOC1110248743.7e-2340.28Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN
        FN+AL+AK VWR    P  L  KV++ +Y     LL A      S FW+GF+W R+LL   +R +VGNG++I  F DPW+P+ TTFKPL+ +N     D 
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN

Query:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI
         V+ FIT    W++  +  +   E+   I S+PIS+   +D W+
Subjt:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI

A0A803NM27 Uncharacterized protein5.6e-2442.36Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN
        FN+ALLAKQ WRLF  P SL ++V++GRY  +   L A      SL W+GF W RELL+  +R QVGNG  I    DPWIP  + F P+          N
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN

Query:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI
         V+D+ITP   WN+ +L+      +V  I S+P+S +   D W+
Subjt:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI

A0A803Q8J4 Uncharacterized protein6.2e-2343.06Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN
        FN+ALLAKQ WRLF    SL ++V++GRY  +   L A      SL W+G  W RELL+  +RK+VGNG SI    DPWIP    F P+    N    ++
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDN

Query:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI
         V+D+ITP   WN  +L       +V  I S+P+S N   D WI
Subjt:  KVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI

M5XJH9 Uncharacterized protein (Fragment)3.7e-2338.62Show/hide
Query:  TFNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDD
        +FNK L+AKQ WRL T   ++ +KV++ RY      L        S FWR  +W  ELL   +RK++G+G     + D WIP+  +F+P+         +
Subjt:  TFNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDD

Query:  NKVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI
         KVSDFI P   WN+D L+    EE+V+ I SIP+S N  +D+W+
Subjt:  NKVSDFITPTMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003107.1e-0833.71Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPL
        FN+ALLAKQ +R+   P +L  ++++ RY     ++   V    S  WR  +  RELL   + + +G+G     + D WI  ET   PL
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.3e-0932.14Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWI---PKETTFKPLKTHNNEFR
        FN ALL KQ+WR+ + P SL  KV + RY ++   L+A +    S  W+    ++E+L+   R  VGNG  I  ++  W+   P     +  +    E+ 
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWI---PKETTFKPLKTHNNEFR

Query:  DDN---KVSDFI
          +   KVSD I
Subjt:  DDN---KVSDFI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.1e-0933.71Show/hide
Query:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPL
        FN+ALLAKQ +R+   P +L  ++++ RY     ++   V    S  WR  +  RELL   + + +G+G     + D WI  ET   PL
Subjt:  FNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTCAATAAAGCACTTCTGGCGAAACAAGTATGGCGTTTATTTACTACTCCAACTAGTCTGACCTATAAAGTTATACAGGGTAGATATGCTTACCAGGAGTTGTT
ACTTCATGCTCTTGTCAAGGTCAATTGTTCATTATTCTGGAGGGGGTTTGTTTGGGCACGTGAACTTCTTCAGTGTGACATGAGAAAACAAGTGGGTAATGGAAATTCTA
TCTTTTTCTTTCAAGATCCATGGATCCCTAAGGAAACTACCTTTAAGCCTTTGAAAACTCATAATAATGAGTTCCGGGATGATAATAAGGTGTCAGATTTTATTACACCA
ACAATGGGGTGGAATATGGATAGGCTACACGGGGCGGTGATCGAGGAAAATGTTAGAACCATCGCATCAATTCCTATTAGTGCAAATATTGAGGAAGATAAATGGATATG
A
mRNA sequenceShow/hide mRNA sequence
ATGACTTTCAATAAAGCACTTCTGGCGAAACAAGTATGGCGTTTATTTACTACTCCAACTAGTCTGACCTATAAAGTTATACAGGGTAGATATGCTTACCAGGAGTTGTT
ACTTCATGCTCTTGTCAAGGTCAATTGTTCATTATTCTGGAGGGGGTTTGTTTGGGCACGTGAACTTCTTCAGTGTGACATGAGAAAACAAGTGGGTAATGGAAATTCTA
TCTTTTTCTTTCAAGATCCATGGATCCCTAAGGAAACTACCTTTAAGCCTTTGAAAACTCATAATAATGAGTTCCGGGATGATAATAAGGTGTCAGATTTTATTACACCA
ACAATGGGGTGGAATATGGATAGGCTACACGGGGCGGTGATCGAGGAAAATGTTAGAACCATCGCATCAATTCCTATTAGTGCAAATATTGAGGAAGATAAATGGATATG
A
Protein sequenceShow/hide protein sequence
MTFNKALLAKQVWRLFTTPTSLTYKVIQGRYAYQELLLHALVKVNCSLFWRGFVWARELLQCDMRKQVGNGNSIFFFQDPWIPKETTFKPLKTHNNEFRDDNKVSDFITP
TMGWNMDRLHGAVIEENVRTIASIPISANIEEDKWI