; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006030 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006030
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:36190403..36191293
RNA-Seq ExpressionLag0006030
SyntenyLag0006030
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]5.1e-6243.4Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        +K +L +IISEN  AF+ GR I DN++V +E +H ++ +K G+ G+ A KLDMSKAYD+VEW F++++M ++GFH KW+ L+M C+ S   SIL NG A 
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMITGM--------VSI------------------------EQVWAFRSILQKYEFASGQVVNADKPALFFS
        G + P RGLRQGDP+SPY+FLLC++  SS++  +        VSI                        ++      ILQ YE ASGQ +N DK ++FFS
Subjt:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMITGM--------VSI------------------------EQVWAFRSILQKYEFASGQVVNADKPALFFS

Query:  PNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPK
         N   + R  +  +LG        +YLG+PS   +++ E F  +K+ V + L GWK KL S+G ++IL+K+VAQ IPTY MSCF+IPK
Subjt:  PNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPK

XP_023901742.1 uncharacterized protein LOC112013579 [Quercus suber]1.8e-6243.21Show/hide
Query:  KGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDATG
        K +L  IISEN  AF   R I DN++V +E +H +  +  G+  +++ KLDMSKA+D+VEW F++ +M ++GF  KW+ LIM+CV S   S+L NG+A G
Subjt:  KGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDATG

Query:  IVIPQRGLRQGDPLSPYLFLLCSEALSSMITGMVSIEQV--------------------------------WAFRSILQKYEFASGQVVNADKPALFFSP
         + P RG+RQGDPLSP LFLLC+E LS++I      +Q+                                 A  SIL +YE ASGQ +N DK ++FFSP
Subjt:  IVIPQRGLRQGDPLSPYLFLLCSEALSSMITGMVSIEQV--------------------------------WAFRSILQKYEFASGQVVNADKPALFFSP

Query:  NVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPK
        N S + R +++N+LG        +YLG+PS   +++ + F  +K  V K L GWKGKL SIG ++IL+K+VAQ +PTY MSCF++PK
Subjt:  NVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPK

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]1.9e-6144.1Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        M+  L  ++S++  AFV GR I DN IVGYE LH ++  +      +A KLDM+KAYD+VEW FLE +M+++G+   WV+ IM C+ S + S + NG+  
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMI----------------TGMVSIEQVWA----------------FRSILQKYEFASGQVVNADKPALFFS
        G V PQRGLRQGDPLSP+LFLLC+EA SS+I                 G+V     +A                F+ +L+KY  ASGQ+VN  K  + F 
Subjt:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMI----------------TGMVSIEQVWA----------------FRSILQKYEFASGQVVNADKPALFFS

Query:  PNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPK
         NVS+  +T L  L+G+ +VDN G+YLG+PS   R + + F+ IK  V   L+GWKG  FS   K++L+K++ Q IPTY MSCFR+PK
Subjt:  PNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPK

XP_030505314.1 uncharacterized protein LOC115720302 [Cannabis sativa]1.9e-6146.21Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        MK VLH +ISE   AF+  R I DN++V YE LH ++++ RGR  + A KLDMSKA+D+VEW FLER++L++GF    V LIM C+ S   S L NG  T
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIPQRGLRQGDPLSPYLFLLCSEALS---------SMITGM-----------------------VSIEQVWAFRSILQKYEFASGQVVNADKPALFFS
        G + PQRG+ QGDPLSPYLFL+CSEALS          M+TG+                            +   +  L  Y  ASGQ++N DK  + FS
Subjt:  GIVIPQRGLRQGDPLSPYLFLLCSEALS---------SMITGM-----------------------VSIEQVWAFRSILQKYEFASGQVVNADKPALFFS

Query:  PNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPKHF
        PN ST  +     LLGMPI     +YLG+PS    N+ E+F  IK  + K L  W+ KLFSIG K+ILLK+V Q IPTY MSCF++P  F
Subjt:  PNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPKHF

XP_030945935.1 uncharacterized protein LOC115970438 [Quercus lobata]1.8e-6247.06Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        +K +L  IIS+   AFV GR I DN++V +E +H I  +K G  G +A KLDMSKAYD+VEW  LE++M ++GFHS+W +L+M C+ S   ++  NG  +
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMITGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSS
        G +IP RGLRQGDPLSPYLFL+C+E LS++I    +   +     +L+ YE ASGQ +N  K +LFFSPN   + +  +    G  ++    +YLG+PS 
Subjt:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMITGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSS

Query:  FSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP
          RN+   FK +K  + K L GWK KL S   K++L+K+VAQ IPTY MSCF+IP
Subjt:  FSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP

TrEMBL top hitse value%identityAlignment
A0A2N9EDY7 Reverse transcriptase domain-containing protein5.9e-6443.9Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        +KG+L  IISE   AFV GR I DN+++ +E LH + S K G+ G +A KLDMSKAYD+VEW FLE++M ++GFH +WVALIM+C+ +   SIL NG+  
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIPQRGLRQGDPLSPYLFLLCSEAL--------------------------------SSMITGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFS
        G + P RG+RQGDPLSPYLFLLC+E L                                 S++    ++ +    + IL  YE ASGQ VN DK  LFFS
Subjt:  GIVIPQRGLRQGDPLSPYLFLLCSEAL--------------------------------SSMITGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFS

Query:  PNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP
               +  + N LG+PI+    +YLG+PS   R R   F HIK+ V   ++GWKGK+ S   ++I++K++AQ +PTY MSCF++P
Subjt:  PNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP

A0A2N9F707 Uncharacterized protein1.2e-6450.19Show/hide
Query:  VLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDATGIV
        VLH++IS+   AFV GR I DNI++ +E LH +KS++RGR   +A KLDMSKAYD+VEW F+  +ML++GF  +WV LIM+CV++   S+L NG  TG +
Subjt:  VLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDATGIV

Query:  IPQRGLRQGDPLSPYLFLLCSEALSSMI-----TGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLGVP
         P RGLRQGDPLSPYLFL+C+E L+S++     TG  S++   A   +L  YE ASGQ +N +K +LFFS N   D R  +   L      +LG+YLG+P
Subjt:  IPQRGLRQGDPLSPYLFLLCSEALSSMI-----TGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLGVP

Query:  SSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP
            + + + F  +K  +   LQGWKGKL S   K+IL+KSVAQ IP Y MSCFRIP
Subjt:  SSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP

A0A2N9H1U1 Reverse transcriptase domain-containing protein5.3e-6548.63Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        +K +L  IISE   AFV GR I DNI+V +E LH +K+R  G+ G++A KLDMSKAYD+VEW FL+ +ML++GF++KWV+L+M+C+ S   SIL NG   
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMITGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSS
        G++ P RGLRQGDPLSPYLFLLC+E L +    +   + V        KYE  SGQ +N DK  LFFS +     ++ +  LLG+P+V    +YLG+PS 
Subjt:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMITGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSS

Query:  FSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP
          R+R E F  IK+ + + LQGWK K+ S   ++IL+K+V Q IP + MSCF++P
Subjt:  FSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP

A0A2N9H6V4 RNase H domain-containing protein7.7e-6445.77Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        +K +L +IISE   AFV GR I DNI++ +E LH +K  K  + G++A KLDMSKAYD+VEW FLE +ML++GF   WV++IM+CV++   S+L NG+  
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMIT----GMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLG
        G   P RGLRQGDP+SPYLFLLC+E L  ++        S+++    + IL+ YE ASGQ +N DK  LFFS +     +  + + LG+P++     YLG
Subjt:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMIT----GMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLG

Query:  VPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPK
        +PS   + +++ F H+K+ V + +QGWKGKL S   +++L+K+V Q IPTY M+ F++PK
Subjt:  VPSSFSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPK

A0A2N9HW04 Reverse transcriptase domain-containing protein7.0e-6548.24Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        +K +L  IISE   AFV GR I DNI+V +E LH +K+R  G+ G++A KLDMSKAYD+VEW FL+ +ML++GF++KWV+L+M+C+ S   SIL NG   
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMITGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSS
        G++ P RGLRQGDPLSPYLFLLC+E L +    +   + V        KYE  SGQ +N DK  LFFS +     ++ +  +LG+P+V    +YLG+PS 
Subjt:  GIVIPQRGLRQGDPLSPYLFLLCSEALSSMITGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSS

Query:  FSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP
          R+R E F  IK+ + + LQGWK K+ S   ++IL+K+V Q IP + MSCF++P
Subjt:  FSRNRWEDFKHIKQHVRKTLQGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIP

SwissProt top hitse value%identityAlignment
P11369 LINE-1 retrotransposable element ORF2 protein5.2e-0922.67Show/hide
Query:  IISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDATGIVIPQR
        II  +   F+ G   + NI      +H I   K   H  +   LD  KA+D+++  F+ +++ R G    ++ +I         +I  NG+    +  + 
Subjt:  IISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDATGIVIPQR

Query:  GLRQGDPLSPYLFLLCSEALSSMITGMVSIEQVWAFR---------------------------SILQKYEFASGQVVNADKP-ALFFSPNVSTDFRTTL
        G RQG PLSPYLF +  E L+  I     I+ +   +                           +++  +    G  +N++K  A  ++ N   +    +
Subjt:  GLRQGDPLSPYLFLLCSEALSSMITGMVSIEQVWAFR---------------------------SILQKYEFASGQVVNADKP-ALFFSPNVSTDFRTTL

Query:  YNLLGMPIVDNLGRYLGVPSSFSRNRWED--FKHIKQHVRKTLQGWK
               IV N  +YLGV  +       D  FK +K+ +++ L+ WK
Subjt:  YNLLGMPIVDNLGRYLGVPSSFSRNRWED--FKHIKQHVRKTLQGWK

P14381 Transposon TX1 uncharacterized 149 kDa protein1.8e-0924.91Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        +K VL E+I  +    V GR+IFDN+ +  + LH   +R+ G        LD  KA+D+V+  +L   +    F  ++V  +     SA+  +  N   T
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIPQRGLRQGDPLSPYLFLLCSE----ALSSMITGMVSIE-------QVWAFRSIL---------------QKYEFASGQVVNADKPALFFSPNVSTD
          +   RG+RQG PLS  L+ L  E     L   +TG+V  E         +A   IL               + Y  AS   +N  K +     ++  D
Subjt:  GIVIPQRGLRQGDPLSPYLFLLCSE----ALSSMITGMVSIE-------QVWAFRSIL---------------QKYEFASGQVVNADKPALFFSPNVSTD

Query:  FRTTLYNLLG--MPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKG--KLFSIGDKKILLKSVAQVIPTYMMSCFRIPKHFL
        F    +  +     I+  LG YL   S+      ++F  +++ V   L  WKG  K+ S+  + +++  +      Y + C    + F+
Subjt:  FRTTLYNLLG--MPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTLQGWKG--KLFSIGDKKILLKSVAQVIPTYMMSCFRIPKHFL

P92555 Uncharacterized mitochondrial protein AtMg012503.7e-0764.86Show/hide
Query:  LTNGDATGIVIPQRGLRQGDPLSPYLFLLCSEALSSM
        + NG   G+V P RGLRQGDPLSPYLF+LC+E LS +
Subjt:  LTNGDATGIVIPQRGLRQGDPLSPYLFLLCSEALSSM

Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)7.1e-0628.57Show/hide
Query:  MKGVLHEIISENNFAFV------LGRSIFDNIIVGYECLHS-IKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISI
        ++ +LH I+++   A V       G +  D  +V    L + I SR+  R  +    LD+ KA+D V    + R + R+G        I   +  +  +I
Subjt:  MKGVLHEIISENNFAFV------LGRSIFDNIIVGYECLHS-IKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISI

Query:  LTN-GDATGIVIPQRGLRQGDPLSPYLF------LLCSEALSSMITGMVSIEQV
            G  T  +  +RG++QGDPLSP+LF      LLCS   +  I G +  E++
Subjt:  LTN-GDATGIVIPQRGLRQGDPLSPYLF------LLCSEALSSMITGMVSIEQV

Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)2.7e-0531.91Show/hide
Query:  HSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDATGIVIPQRGLRQGDPLSPYLFLLCSEAL
        H IK R+     +    LD+ KA+D V    + R M   G        IM  +  A  +I+  G  T  +  + G++QGDPLSP LF +  + L
Subjt:  HSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDATGIVIPQRGLRQGDPLSPYLFLLCSEAL

Arabidopsis top hitse value%identityAlignment
AT4G20520.1 RNA binding;RNA-directed DNA polymerases2.0e-1130Show/hide
Query:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT
        +K ++  +I     +F+ GR   DNI+   E +HS++ RK+G  GW+  KLD+ KAYD++ W +LE  ++  GF   W+  I      A+      G A 
Subjt:  MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDAT

Query:  GIVIP-----QRGLRQGDPLSPYL--FLLCSEALSSMITG
            P     + G R  D  +P+    + C+E L  +  G
Subjt:  GIVIP-----QRGLRQGDPLSPYL--FLLCSEALSSMITG

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)2.7e-0864.86Show/hide
Query:  LTNGDATGIVIPQRGLRQGDPLSPYLFLLCSEALSSM
        + NG   G+V P RGLRQGDPLSPYLF+LC+E LS +
Subjt:  LTNGDATGIVIPQRGLRQGDPLSPYLFLLCSEALSSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGAGTTCTTCACGAAATTATTTCAGAAAATAATTTTGCTTTTGTTCTTGGGCGGTCGATTTTTGATAATATTATTGTGGGATATGAATGCTTGCATTCAATTAA
ATCAAGGAAAAGAGGACGACATGGATGGCTAGCCCAAAAACTGGATATGAGCAAAGCATATGACCAGGTGGAGTGGTGTTTTTTGGAGCGCTTGATGTTGAGGGTGGGTT
TCCACTCAAAATGGGTGGCTTTGATCATGGATTGCGTGAAATCCGCAAAAATTTCTATCCTTACTAATGGTGATGCTACAGGAATCGTTATACCACAACGGGGGTTGAGA
CAAGGAGACCCACTCTCTCCATACCTGTTTTTGCTATGCTCAGAGGCATTATCATCGATGATAACTGGGATGGTGTCCATTGAACAGGTTTGGGCTTTTCGTTCTATTCT
ACAAAAGTATGAGTTTGCTTCAGGGCAAGTGGTTAATGCCGACAAGCCTGCGTTATTTTTCTCACCTAATGTATCTACGGACTTTCGAACAACTCTTTATAATTTGTTGG
GAATGCCTATAGTGGATAACCTTGGGAGATATCTGGGAGTCCCATCTTCTTTCTCTAGGAATAGATGGGAGGATTTTAAGCATATTAAACAACATGTAAGGAAAACGCTC
CAAGGATGGAAGGGAAAGTTATTCTCCATTGGTGACAAGAAAATTCTTCTCAAAAGTGTAGCTCAGGTCATACCCACGTACATGATGAGTTGTTTTCGCATCCCAAAACA
CTTTTTGATGATATCCACAGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGAGTTCTTCACGAAATTATTTCAGAAAATAATTTTGCTTTTGTTCTTGGGCGGTCGATTTTTGATAATATTATTGTGGGATATGAATGCTTGCATTCAATTAA
ATCAAGGAAAAGAGGACGACATGGATGGCTAGCCCAAAAACTGGATATGAGCAAAGCATATGACCAGGTGGAGTGGTGTTTTTTGGAGCGCTTGATGTTGAGGGTGGGTT
TCCACTCAAAATGGGTGGCTTTGATCATGGATTGCGTGAAATCCGCAAAAATTTCTATCCTTACTAATGGTGATGCTACAGGAATCGTTATACCACAACGGGGGTTGAGA
CAAGGAGACCCACTCTCTCCATACCTGTTTTTGCTATGCTCAGAGGCATTATCATCGATGATAACTGGGATGGTGTCCATTGAACAGGTTTGGGCTTTTCGTTCTATTCT
ACAAAAGTATGAGTTTGCTTCAGGGCAAGTGGTTAATGCCGACAAGCCTGCGTTATTTTTCTCACCTAATGTATCTACGGACTTTCGAACAACTCTTTATAATTTGTTGG
GAATGCCTATAGTGGATAACCTTGGGAGATATCTGGGAGTCCCATCTTCTTTCTCTAGGAATAGATGGGAGGATTTTAAGCATATTAAACAACATGTAAGGAAAACGCTC
CAAGGATGGAAGGGAAAGTTATTCTCCATTGGTGACAAGAAAATTCTTCTCAAAAGTGTAGCTCAGGTCATACCCACGTACATGATGAGTTGTTTTCGCATCCCAAAACA
CTTTTTGATGATATCCACAGTATGA
Protein sequenceShow/hide protein sequence
MKGVLHEIISENNFAFVLGRSIFDNIIVGYECLHSIKSRKRGRHGWLAQKLDMSKAYDQVEWCFLERLMLRVGFHSKWVALIMDCVKSAKISILTNGDATGIVIPQRGLR
QGDPLSPYLFLLCSEALSSMITGMVSIEQVWAFRSILQKYEFASGQVVNADKPALFFSPNVSTDFRTTLYNLLGMPIVDNLGRYLGVPSSFSRNRWEDFKHIKQHVRKTL
QGWKGKLFSIGDKKILLKSVAQVIPTYMMSCFRIPKHFLMISTV