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Lag0006043 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006043
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr6:36432223..36434668
RNA-Seq ExpressionLag0006043
SyntenyLag0006043
Gene Ontology termsNA
InterPro domainsIPR015410 - Domain of unknown function DUF1985


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN48800.2 hypothetical protein Csa_003918 [Cucumis sativus]1.6e-1529.77Show/hide
Query:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------
        ++C     +ELWFN EG + +FG+K+F LITGLNCGE+ AID SK                                                       
Subjt:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------

Query:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA
                 LL+                                   G+ GFPYALLVWAY+ IPLL     + A R+S   P+M NW + VHPE +DL+
Subjt:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA

Query:  LKVFEHEDFSFSPMI
         KVF+ E F   P+I
Subjt:  LKVFEHEDFSFSPMI

XP_022132727.1 uncharacterized protein LOC111005524 [Momordica charantia]2.3e-1729.96Show/hide
Query:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------
        ++CS    +ELWFN EG V +FG+K+F LITG+NCGE+  ID SK                                                       
Subjt:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------

Query:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA
                 LL+                                   G+ GFPYALLVWAY+ IPLL+     FA ++S+ +P+M NW +NVHPE RDL+
Subjt:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA

Query:  LKVFEHEDFSFSPMIVEQISDAEKGKR
         K+F  + F   P+   + +DAE G R
Subjt:  LKVFEHEDFSFSPMIVEQISDAEKGKR

XP_031743197.1 uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus]1.6e-1529.77Show/hide
Query:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------
        ++C     +ELWFN EG + +FG+K+F LITGLNCGE+ AID SK                                                       
Subjt:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------

Query:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA
                 LL+                                   G+ GFPYALLVWAY+ IPLL     + A R+S   P+M NW + VHPE +DL+
Subjt:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA

Query:  LKVFEHEDFSFSPMI
         KVF+ E F   P+I
Subjt:  LKVFEHEDFSFSPMI

XP_031743205.1 uncharacterized protein LOC101221625 isoform X17 [Cucumis sativus]1.6e-1529.77Show/hide
Query:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------
        ++C     +ELWFN EG + +FG+K+F LITGLNCGE+ AID SK                                                       
Subjt:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------

Query:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA
                 LL+                                   G+ GFPYALLVWAY+ IPLL     + A R+S   P+M NW + VHPE +DL+
Subjt:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA

Query:  LKVFEHEDFSFSPMI
         KVF+ E F   P+I
Subjt:  LKVFEHEDFSFSPMI

XP_031743208.1 uncharacterized protein LOC101221625 isoform X20 [Cucumis sativus]1.6e-1529.77Show/hide
Query:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------
        ++C     +ELWFN EG + +FG+K+F LITGLNCGE+ AID SK                                                       
Subjt:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------

Query:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA
                 LL+                                   G+ GFPYALLVWAY+ IPLL     + A R+S   P+M NW + VHPE +DL+
Subjt:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA

Query:  LKVFEHEDFSFSPMI
         KVF+ E F   P+I
Subjt:  LKVFEHEDFSFSPMI

TrEMBL top hitse value%identityAlignment
A0A0A0KI50 TF-B3 domain-containing protein7.9e-1629.77Show/hide
Query:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------
        ++C     +ELWFN EG + +FG+K+F LITGLNCGE+ AID SK                                                       
Subjt:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------

Query:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA
                 LL+                                   G+ GFPYALLVWAY+ IPLL     + A R+S   P+M NW + VHPE +DL+
Subjt:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA

Query:  LKVFEHEDFSFSPMI
         KVF+ E F   P+I
Subjt:  LKVFEHEDFSFSPMI

A0A5A7TZZ0 Protein Ycf2-like2.0e-1437.5Show/hide
Query:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHS--------KLLVVAGL--AGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKN
        + C    + +L F   G V+RFGL+EF LITGL C ++  I+H         K  V  G     F + +L WAY+ IP L+ P  +FA R+SN +P++ N
Subjt:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHS--------KLLVVAGL--AGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKN

Query:  WKSNVHPELRDLALKVFEHEDFSFSPMI
        W ++  P+ +DL  KVF+      SPM+
Subjt:  WKSNVHPELRDLALKVFEHEDFSFSPMI

A0A5A7U4J7 Protein Ycf2-like7.9e-1628.1Show/hide
Query:  GKKEKHGKGEDEMSNTSNKTEILDDQDERMEDVCEGMQEGDE--HTEVRGGETDEEDIGWKYINDYDMEVDGGRFDEDLHDKDDEMINMNGKRMNETEEK
        GK++  G  +  +   + K E    + +R++++ +   E +E  H E    E ++ +         D E +  +++E+  D+++E     G+  N +  +
Subjt:  GKKEKHGKGEDEMSNTSNKTEILDDQDERMEDVCEGMQEGDE--HTEVRGGETDEEDIGWKYINDYDMEVDGGRFDEDLHDKDDEMINMNGKRMNETEEK

Query:  V---TRQNSSALHAGK--------EYPEEMLKKKTPPSKSVKKDNKKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSKLLVVAGL---
        +   TR+ S A   GK        E   E  ++K     + +K  + C P  + +L F   G V+RFGL+EF LIT L C EV  I+H  +     L   
Subjt:  V---TRQNSSALHAGK--------EYPEEMLKKKTPPSKSVKKDNKKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSKLLVVAGL---

Query:  --------AGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLALKVFEHEDFSFSPMI
                 GF + +L WAY+ IP L+ PP +FA R+SN +P++ NW ++  P+ +DL  KVF+      S M+
Subjt:  --------AGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLALKVFEHEDFSFSPMI

A0A5A7UCM5 Uncharacterized protein5.1e-1529.8Show/hide
Query:  GGRFDEDLHDKDDEMINMNGKRMNETEEKVTRQNSSALHAGKEYPEEMLKKKTPPSKSVKKDNKKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGE
        G R  +    KD+ ++  +    NE +     +N S+       P   + ++      +K   K+ +    DELWFNFEG + +F +KEFE IT LNCG 
Subjt:  GGRFDEDLHDKDDEMINMNGKRMNETEEKVTRQNSSALHAGKEYPEEMLKKKTPPSKSVKKDNKKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGE

Query:  VSAIDHSKL-----------------------------------LVVAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDL
        +  +D S +                                    +V G+A F Y+LLV  Y+CIPLLT P  + A++V +    M NW  + HPE +DL
Subjt:  VSAIDHSKL-----------------------------------LVVAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDL

Query:  ALKVFEHEDFSFSPM----IVEQISDAEKGKREEPDNEGVEHVGECSKRNDEEGQ
        A KVF+++ F F  M     VE++   E   REE    G    GE S + +   +
Subjt:  ALKVFEHEDFSFSPM----IVEQISDAEKGKREEPDNEGVEHVGECSKRNDEEGQ

A0A6J1BX50 uncharacterized protein LOC1110055241.1e-1729.96Show/hide
Query:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------
        ++CS    +ELWFN EG V +FG+K+F LITG+NCGE+  ID SK                                                       
Subjt:  KKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK-------------------------------------------------------

Query:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA
                 LL+                                   G+ GFPYALLVWAY+ IPLL+     FA ++S+ +P+M NW +NVHPE RDL+
Subjt:  ---------LLV---------------------------------VAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLA

Query:  LKVFEHEDFSFSPMIVEQISDAEKGKR
         K+F  + F   P+   + +DAE G R
Subjt:  LKVFEHEDFSFSPMIVEQISDAEKGKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31150.1 Domain of unknown function (DUF1985)8.1e-0546.15Show/hide
Query:  KSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK
        K  ELWF F G  +RF ++EF ++TGL CG++   D  K
Subjt:  KSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDHSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGTGGGTAAAGAAACCCCTTCAAGGTCCAACATTTTCAACCGAATAGTTGAAAATGTTGGTAGGATGTTAAGTGCAATAGCCCCAACCAAGAGACAACTTTTTGG
GGATGAGGAAATTGTTGATGCTGAAGGAAAAAAGGAAAAACATGGCAAGGGTGAAGATGAAATGTCGAACACCTCGAACAAGACAGAGATTTTAGATGATCAAGACGAAC
GGATGGAAGATGTTTGCGAAGGAATGCAAGAGGGAGATGAACACACCGAAGTAAGAGGCGGTGAAACAGATGAAGAAGATATTGGGTGGAAATATATCAATGACTATGAC
ATGGAGGTCGATGGAGGGCGATTTGATGAAGACTTACATGATAAGGATGATGAGATGATCAATATGAATGGTAAAAGGATGAATGAAACTGAAGAAAAGGTGACCAGACA
AAACTCCAGTGCTCTACACGCTGGAAAAGAATATCCTGAGGAGATGTTGAAAAAGAAGACTCCTCCATCAAAATCAGTAAAAAAGGACAACAAGAAGTGTAGCCCAACAA
AATCAGATGAGCTCTGGTTTAATTTCGAGGGAATTGTAGTTAGGTTCGGACTTAAGGAGTTCGAGTTGATTACTGGTCTGAACTGTGGAGAGGTTAGTGCTATTGATCAT
TCCAAACTACTGGTAGTAGCGGGGTTAGCTGGATTCCCATATGCCTTATTGGTGTGGGCATACAAGTGTATCCCTTTACTCACAAGACCACCTAAATACTTTGCGCGTCG
TGTCAGCAACAGACTTCCAAAAATGAAAAACTGGAAATCAAACGTGCATCCAGAATTGAGGGACCTCGCACTGAAGGTCTTCGAACATGAAGATTTCTCATTCAGTCCTA
TGATTGTGGAGCAAATTTCTGATGCAGAAAAGGGGAAAAGAGAAGAGCCTGATAATGAAGGGGTTGAGCATGTTGGAGAGTGCTCTAAAAGAAATGATGAAGAAGGACAA
ACAAAATTGACCATGGGCAAGGGAAGAAACCATCCGAAGATATCTTTCATGGGTTTGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGTGGGTAAAGAAACCCCTTCAAGGTCCAACATTTTCAACCGAATAGTTGAAAATGTTGGTAGGATGTTAAGTGCAATAGCCCCAACCAAGAGACAACTTTTTGG
GGATGAGGAAATTGTTGATGCTGAAGGAAAAAAGGAAAAACATGGCAAGGGTGAAGATGAAATGTCGAACACCTCGAACAAGACAGAGATTTTAGATGATCAAGACGAAC
GGATGGAAGATGTTTGCGAAGGAATGCAAGAGGGAGATGAACACACCGAAGTAAGAGGCGGTGAAACAGATGAAGAAGATATTGGGTGGAAATATATCAATGACTATGAC
ATGGAGGTCGATGGAGGGCGATTTGATGAAGACTTACATGATAAGGATGATGAGATGATCAATATGAATGGTAAAAGGATGAATGAAACTGAAGAAAAGGTGACCAGACA
AAACTCCAGTGCTCTACACGCTGGAAAAGAATATCCTGAGGAGATGTTGAAAAAGAAGACTCCTCCATCAAAATCAGTAAAAAAGGACAACAAGAAGTGTAGCCCAACAA
AATCAGATGAGCTCTGGTTTAATTTCGAGGGAATTGTAGTTAGGTTCGGACTTAAGGAGTTCGAGTTGATTACTGGTCTGAACTGTGGAGAGGTTAGTGCTATTGATCAT
TCCAAACTACTGGTAGTAGCGGGGTTAGCTGGATTCCCATATGCCTTATTGGTGTGGGCATACAAGTGTATCCCTTTACTCACAAGACCACCTAAATACTTTGCGCGTCG
TGTCAGCAACAGACTTCCAAAAATGAAAAACTGGAAATCAAACGTGCATCCAGAATTGAGGGACCTCGCACTGAAGGTCTTCGAACATGAAGATTTCTCATTCAGTCCTA
TGATTGTGGAGCAAATTTCTGATGCAGAAAAGGGGAAAAGAGAAGAGCCTGATAATGAAGGGGTTGAGCATGTTGGAGAGTGCTCTAAAAGAAATGATGAAGAAGGACAA
ACAAAATTGACCATGGGCAAGGGAAGAAACCATCCGAAGATATCTTTCATGGGTTTGAGATGA
Protein sequenceShow/hide protein sequence
MNVGKETPSRSNIFNRIVENVGRMLSAIAPTKRQLFGDEEIVDAEGKKEKHGKGEDEMSNTSNKTEILDDQDERMEDVCEGMQEGDEHTEVRGGETDEEDIGWKYINDYD
MEVDGGRFDEDLHDKDDEMINMNGKRMNETEEKVTRQNSSALHAGKEYPEEMLKKKTPPSKSVKKDNKKCSPTKSDELWFNFEGIVVRFGLKEFELITGLNCGEVSAIDH
SKLLVVAGLAGFPYALLVWAYKCIPLLTRPPKYFARRVSNRLPKMKNWKSNVHPELRDLALKVFEHEDFSFSPMIVEQISDAEKGKREEPDNEGVEHVGECSKRNDEEGQ
TKLTMGKGRNHPKISFMGLR