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Lag0006053 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006053
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr6:36677769..36678098
RNA-Seq ExpressionLag0006053
SyntenyLag0006053
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046219.1 uncharacterized protein E6C27_scaffold284G00070 [Cucumis melo var. makuwa]3.5e-2561.47Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        M +    G    +RLVE+EEQMLYL ++PDS+RFLESRLEEIA K D ID V+GR++G+PI+ELL RV+ LEG   R  S ERGDSSTGSVA +EERV  
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        LDS QK ++
Subjt:  LDSFQKAIV

KAA0046343.1 uncharacterized protein E6C27_scaffold149G00520 [Cucumis melo var. makuwa]2.1e-2560.55Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        MS+         +RLVE+EEQMLYL E+PDS+RFLESRLEEI  K DTIDVV+GR++G+PI+ELL RV  LEG   R  S+E GDSS+G VA MEER++ 
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        LDS QK ++
Subjt:  LDSFQKAIV

KAA0055407.1 uncharacterized protein E6C27_scaffold80G002530 [Cucumis melo var. makuwa]6.0e-2561.47Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        MS+    G    +RLVE+EEQMLYL E+PDS+RFLESRLEEIA K D ID V+GR++G+ I+ELL RV+ LEG   R  S ERGDSSTGSVA +EERV  
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        LD+ QK ++
Subjt:  LDSFQKAIV

TYK18977.1 uncharacterized protein E5676_scaffold418G00720 [Cucumis melo var. makuwa]3.5e-2561.47Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        M +    G    +RLVE+EEQMLYL ++PDS+RFLESRLEEIA K D ID V+GR++G+PI+ELL RV+ LEG   R  S ERGDSSTGSVA +EERV  
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        LDS QK ++
Subjt:  LDSFQKAIV

XP_022155185.1 uncharacterized protein LOC111022320 [Momordica charantia]6.4e-2757.8Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        MS TKQ+G +H++RLVEIEE++L+LRE+PD++R++ESRL+EI+TK D IDVV+ R+DG+ I+EL++RVE LE K  R  + ERG+SS+ S+A MEERV+ 
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        +D  +K IV
Subjt:  LDSFQKAIV

TrEMBL top hitse value%identityAlignment
A0A5A7TY91 Retrotrans_gag domain-containing protein1.7e-2561.47Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        M +    G    +RLVE+EEQMLYL ++PDS+RFLESRLEEIA K D ID V+GR++G+PI+ELL RV+ LEG   R  S ERGDSSTGSVA +EERV  
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        LDS QK ++
Subjt:  LDSFQKAIV

A0A5A7ULF5 Retrotrans_gag domain-containing protein2.9e-2561.47Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        MS+    G    +RLVE+EEQMLYL E+PDS+RFLESRLEEIA K D ID V+GR++G+ I+ELL RV+ LEG   R  S ERGDSSTGSVA +EERV  
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        LD+ QK ++
Subjt:  LDSFQKAIV

A0A5D3D5Z0 Retrotrans_gag domain-containing protein1.7e-2561.47Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        M +    G    +RLVE+EEQMLYL ++PDS+RFLESRLEEIA K D ID V+GR++G+PI+ELL RV+ LEG   R  S ERGDSSTGSVA +EERV  
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        LDS QK ++
Subjt:  LDSFQKAIV

A0A5D3E355 Uncharacterized protein1.0e-2560.55Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        MS+         +RLVE+EEQMLYL E+PDS+RFLESRLEEI  K DTIDVV+GR++G+PI+ELL RV  LEG   R  S+E GDSS+G VA MEER++ 
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        LDS QK ++
Subjt:  LDSFQKAIV

A0A6J1DLQ6 uncharacterized protein LOC1110223203.1e-2757.8Show/hide
Query:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS
        MS TKQ+G +H++RLVEIEE++L+LRE+PD++R++ESRL+EI+TK D IDVV+ R+DG+ I+EL++RVE LE K  R  + ERG+SS+ S+A MEERV+ 
Subjt:  MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDS

Query:  LDSFQKAIV
        +D  +K IV
Subjt:  LDSFQKAIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGACAAAGCAGATGGGCATGACCCATGTTGAACGACTCGTAGAAATTGAAGAGCAGATGCTCTACTTGAGAGAACTCCCGGATTCAGTTCGGTTCTTGGAATC
TCGGCTGGAAGAGATTGCAACCAAGATGGACACAATTGACGTGGTATCTGGCCGTCTGGATGGAATGCCCATCAAAGAATTATTAATGAGGGTTGAGAACCTCGAAGGAA
AATCTACCAGACCTAGTAGCTTCGAGCGTGGGGACAGCTCGACGGGCTCTGTCGCCCAGATGGAGGAGCGAGTCGACAGTTTAGACAGCTTCCAAAAAGCAATAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGACAAAGCAGATGGGCATGACCCATGTTGAACGACTCGTAGAAATTGAAGAGCAGATGCTCTACTTGAGAGAACTCCCGGATTCAGTTCGGTTCTTGGAATC
TCGGCTGGAAGAGATTGCAACCAAGATGGACACAATTGACGTGGTATCTGGCCGTCTGGATGGAATGCCCATCAAAGAATTATTAATGAGGGTTGAGAACCTCGAAGGAA
AATCTACCAGACCTAGTAGCTTCGAGCGTGGGGACAGCTCGACGGGCTCTGTCGCCCAGATGGAGGAGCGAGTCGACAGTTTAGACAGCTTCCAAAAAGCAATAGTTTAG
Protein sequenceShow/hide protein sequence
MSATKQMGMTHVERLVEIEEQMLYLRELPDSVRFLESRLEEIATKMDTIDVVSGRLDGMPIKELLMRVENLEGKSTRPSSFERGDSSTGSVAQMEERVDSLDSFQKAIV