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Lag0006057 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006057
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr6:36720962..36721605
RNA-Seq ExpressionLag0006057
SyntenyLag0006057
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.1e-1531.76Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL
        ++Q +P   NT+P L+ I+LR  DW  ++A  +M WH+   F  T   ++  D D+T  Y+ WY+NI++ +IT+ GA     R+ ++       +  ++L
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL

Query:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ
        N+CN+ +  M  + YMY +PI+P           A V+    LVQE   P   +E   + +++P  TQTQ
Subjt:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ

KAA0047926.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.9e-1632.04Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDLSEDMEILNLCNNG
        ++QV+P   NT+P L+ I+LR  DW  ++A  +M WH+   F TT   ++  D  +T  Y+ WY+NIT+ +IT+ GA        D  +  ++LN+CN+ 
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDLSEDMEILNLCNNG

Query:  DANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMP----LFTQTQDGAGPSTLVLPSW
        +  M  + YMY +PI+P L           V+    LVQE   P   +E   +VE++P      TQT        +++P++
Subjt:  DANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMP----LFTQTQDGAGPSTLVLPSW

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.9e-1632.35Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL
        ++Q +P   NT+P L+ I+LR  DW  ++A  +M WH+   F  T   ++  D D+T  Y+ WY+NI++ +IT+ GA     R+ ++       +  ++L
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL

Query:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ
        N+CN+ +  M  + YMY +PI+P           A V+    LVQE   P   +E   + E++P  TQTQ
Subjt:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.1e-1531.76Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL
        ++Q +P   NT+P L+ I+LR  DW  ++A  +M WH+   F  T   ++  D D+T  Y+ WY+NI++ +IT+ GA     R+ ++       +  ++L
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL

Query:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ
        N+CN+ +  M  + YMY +PI+P           A V+    LVQE   P   +E   + +++P  TQTQ
Subjt:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.2e-1532.35Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGA-----HTVKQRTCDLSEDM-EIL
        ++Q +P   NT+P L+ I+LR  DW  ++A  +M WH+   F  T   ++  D D+T  Y+ WY+NI++ +IT+ GA      +   R  ++++D+ ++L
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGA-----HTVKQRTCDLSEDM-EIL

Query:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ
        N+CN+ +  M  + YMY +PI+            A V++   LVQE   P   +E   + E++P  TQTQ
Subjt:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein5.3e-1631.76Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL
        ++Q +P   NT+P L+ I+LR  DW  ++A  +M WH+   F  T   ++  D D+T  Y+ WY+NI++ +IT+ GA     R+ ++       +  ++L
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL

Query:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ
        N+CN+ +  M  + YMY +PI+P           A V+    LVQE   P   +E   + +++P  TQTQ
Subjt:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ

A0A5A7U115 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-1632.04Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDLSEDMEILNLCNNG
        ++QV+P   NT+P L+ I+LR  DW  ++A  +M WH+   F TT   ++  D  +T  Y+ WY+NIT+ +IT+ GA        D  +  ++LN+CN+ 
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDLSEDMEILNLCNNG

Query:  DANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMP----LFTQTQDGAGPSTLVLPSW
        +  M  + YMY +PI+P L           V+    LVQE   P   +E   +VE++P      TQT        +++P++
Subjt:  DANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMP----LFTQTQDGAGPSTLVLPSW

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.4e-1632.35Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL
        ++Q +P   NT+P L+ I+LR  DW  ++A  +M WH+   F  T   ++  D D+T  Y+ WY+NI++ +IT+ GA     R+ ++       +  ++L
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL

Query:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ
        N+CN+ +  M  + YMY +PI+P           A V+    LVQE   P   +E   + E++P  TQTQ
Subjt:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein5.3e-1631.76Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL
        ++Q +P   NT+P L+ I+LR  DW  ++A  +M WH+   F  T   ++  D D+T  Y+ WY+NI++ +IT+ GA     R+ ++       +  ++L
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDL------SEDMEIL

Query:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ
        N+CN+ +  M  + YMY +PI+P           A V+    LVQE   P   +E   + +++P  TQTQ
Subjt:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-1532.35Show/hide
Query:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGA-----HTVKQRTCDLSEDM-EIL
        ++Q +P   NT+P L+ I+LR  DW  ++A  +M WH+   F  T   ++  D D+T  Y+ WY+NI++ +IT+ GA      +   R  ++++D+ ++L
Subjt:  MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVD-VDGDMTPNYMEWYENITRHFITRGGA-----HTVKQRTCDLSEDM-EIL

Query:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ
        N+CN+ +  M  + YMY +PI+            A V++   LVQE   P   +E   + E++P  TQTQ
Subjt:  NLCNNGDANMVQLIYMYHIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAGTTATACCAGATGTGTACAACACGAAACCAACACTATATACCATCAATCTTCGACATGTTGATTGGTTTGTCCAGCTTGCACCATATTTAATGTGGTGGCA
TTCACACGCAAATTTCATTACAACCAGTTCTTTAGTAGATGTCGATGGAGATATGACTCCAAACTATATGGAATGGTATGAGAATATTACTAGACATTTCATCACTCGTG
GAGGAGCTCATACGGTTAAACAGCGCACATGTGATCTCTCAGAAGATATGGAGATCCTAAATTTGTGCAACAATGGTGATGCCAACATGGTGCAACTCATTTATATGTAC
CACATACCTATTCTACCTCCTCTTGGACCTAGGTGTAGAGGAGGTGCTTGTGCTCATGTTGAAGAGGAGGATATTCTAGTACAGGAGCATTTCTCACCAGTTGTACCTAA
AGAGTTTCACCACAACGTTGAAGACATGCCTCTTTTCACACAGACACAGGATGGTGCTGGTCCTTCCACTCTAGTTCTGCCATCATGGGATGATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACAAGTTATACCAGATGTGTACAACACGAAACCAACACTATATACCATCAATCTTCGACATGTTGATTGGTTTGTCCAGCTTGCACCATATTTAATGTGGTGGCA
TTCACACGCAAATTTCATTACAACCAGTTCTTTAGTAGATGTCGATGGAGATATGACTCCAAACTATATGGAATGGTATGAGAATATTACTAGACATTTCATCACTCGTG
GAGGAGCTCATACGGTTAAACAGCGCACATGTGATCTCTCAGAAGATATGGAGATCCTAAATTTGTGCAACAATGGTGATGCCAACATGGTGCAACTCATTTATATGTAC
CACATACCTATTCTACCTCCTCTTGGACCTAGGTGTAGAGGAGGTGCTTGTGCTCATGTTGAAGAGGAGGATATTCTAGTACAGGAGCATTTCTCACCAGTTGTACCTAA
AGAGTTTCACCACAACGTTGAAGACATGCCTCTTTTCACACAGACACAGGATGGTGCTGGTCCTTCCACTCTAGTTCTGCCATCATGGGATGATTATTAG
Protein sequenceShow/hide protein sequence
MKQVIPDVYNTKPTLYTINLRHVDWFVQLAPYLMWWHSHANFITTSSLVDVDGDMTPNYMEWYENITRHFITRGGAHTVKQRTCDLSEDMEILNLCNNGDANMVQLIYMY
HIPILPPLGPRCRGGACAHVEEEDILVQEHFSPVVPKEFHHNVEDMPLFTQTQDGAGPSTLVLPSWDDY