; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006083 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006083
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr6:37104963..37108963
RNA-Seq ExpressionLag0006083
SyntenyLag0006083
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598930.1 putative inactive serine/threonine-protein kinase scy1, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1568Show/hide
Query:  MSSVGAFQLVLPPFPSSSSFSKTTPS--LRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA
        MSS+  FQL+LPPFPSSSS S T P+  L LLP  T PLQR AHLNRNSQHF  I L + SK GRK G FRCFSA
Subjt:  MSSVGAFQLVLPPFPSSSSFSKTTPS--LRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA

XP_022149817.1 monothiol glutaredoxin-S7, chloroplastic isoform X1 [Momordica charantia]2.2e-1672.97Show/hide
Query:  MSSVGAFQLVLPPFP-SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA
        MSSVGAFQL  PPFP SSSSFSKTTPSLRLLPF    LQRHA LNRN Q  DA+S+G  S+ GRK G  RCFSA
Subjt:  MSSVGAFQLVLPPFP-SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA

XP_022149818.1 monothiol glutaredoxin-S7, chloroplastic isoform X2 [Momordica charantia]2.2e-1672.97Show/hide
Query:  MSSVGAFQLVLPPFP-SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA
        MSSVGAFQL  PPFP SSSSFSKTTPSLRLLPF    LQRHA LNRN Q  DA+S+G  S+ GRK G  RCFSA
Subjt:  MSSVGAFQLVLPPFP-SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA

XP_023546801.1 uncharacterized protein LOC111805800 [Cucurbita pepo subsp. pepo]5.3e-1568Show/hide
Query:  MSSVGAFQLVLPPFPSSSSFSKTTPS--LRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA
        MSS+  FQL+LPPFPSSSS S T P+  L LLP  T PLQR AHLNRNSQHF  I L + SK GRK G FRCFSA
Subjt:  MSSVGAFQLVLPPFPSSSSFSKTTPS--LRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA

XP_038889485.1 monothiol glutaredoxin-S7, chloroplastic [Benincasa hispida]5.7e-1773.33Show/hide
Query:  MSSVGAFQLVLPPFP--SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA
        MSSVG FQL+LPPFP  SSSSF+ TT SLR LPF T PLQRHAHLNR+ QH DAISL   SK GR  G FRCFSA
Subjt:  MSSVGAFQLVLPPFP--SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA

TrEMBL top hitse value%identityAlignment
A0A0A0LEI5 CorC_HlyC domain-containing protein2.9e-1150Show/hide
Query:  VGGKVKRNLVKETISQENHDIVILLETKREYFNRQLVNSLWGSRYVDWEIVESVGASGV-------SISFRLKDEDIRWVLGVYSP
        + G  KR L+KE   QEN DIVIL+ET    F+ Q +  LW SR VDWE + S+G SGV       SISFR +D +  WV GVY P
Subjt:  VGGKVKRNLVKETISQENHDIVILLETKREYFNRQLVNSLWGSRYVDWEIVESVGASGV-------SISFRLKDEDIRWVLGVYSP

A0A6J1D7S5 monothiol glutaredoxin-S7, chloroplastic isoform X21.0e-1672.97Show/hide
Query:  MSSVGAFQLVLPPFP-SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA
        MSSVGAFQL  PPFP SSSSFSKTTPSLRLLPF    LQRHA LNRN Q  DA+S+G  S+ GRK G  RCFSA
Subjt:  MSSVGAFQLVLPPFP-SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA

A0A6J1D914 monothiol glutaredoxin-S7, chloroplastic isoform X11.0e-1672.97Show/hide
Query:  MSSVGAFQLVLPPFP-SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA
        MSSVGAFQL  PPFP SSSSFSKTTPSLRLLPF    LQRHA LNRN Q  DA+S+G  S+ GRK G  RCFSA
Subjt:  MSSVGAFQLVLPPFP-SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA

A0A6J1EPE9 monothiol glutaredoxin-S7, chloroplastic2.6e-1568Show/hide
Query:  MSSVGAFQLVLPPFPSSSSFSKTTPS--LRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA
        MSS+  FQL+LPPFPSSSS S T P+  L LLP  T PLQR AHLNRNSQHF  I L + SK GRK G FRCFSA
Subjt:  MSSVGAFQLVLPPFPSSSSFSKTTPS--LRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA

A0A6J1K9E2 uncharacterized protein LOC1114923065.7e-1568Show/hide
Query:  MSSVGAFQLVLPPFP--SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA
        MSS+  FQL+LPPFP  SSSS +KTT SL LLP  T PLQR A+LNRNSQHF  I L + SK GRK G FRCFSA
Subjt:  MSSVGAFQLVLPPFP--SSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTGTTGGCGCATTTCAACTAGTATTACCCCCATTTCCTTCCTCCTCTTCTTTTAGCAAAACAACCCCTTCTCTTCGTCTTCTCCCCTTTACCACTTTGCCTCT
GCAGCGCCACGCCCACCTTAATCGGAATTCGCAACATTTCGATGCAATTTCACTCGGATATAGTTCCAAATATGGACGGAAACTCGGATTCTTCCGCTGCTTCTCAGCAC
CGAAGCATGGAGTGGTTTTCCATACTAAGAGGTTGCTTTTCAACTTTGGTTTTGGCGAAAAACTAATGCAAAATGAACTCGCTTACACCTCGACTTTTATCACTTTGGAA
AACTGCAAGGGGACTCTTTATGCCAGGGTGAGGAAGATGAGGAGGGTGATGGTAGATCGGAAAATGTTTACCCTTCGAAAAAGTAAGTGTGGGAAAAGGGTGTCGACAGA
AGAATGGAGAGGATCCGGAGTTAGGCTAGTGGAGTTGGATGTGGGTTCTTCGACTTGGGTCCGAGATTGTTTGGTGTCTGTATCGAAGGCTGGACGTCTGCTGGGGGTGG
GCAACTATGGCAGACGAGTTCTCAGGTTTTCTCAAACCTTCTTCAAACGGGAAGGGGAGGATGATGTTTGTCCCAAAGCAGAGGATTGGAAGCTGGCCTTTTCAGGCGGA
TGGATTATGGTGCTGGATATCCCACCATTTCTAAGAACCCGTCAGTTGATTGTATCAGTTGCGGATCTATGTGGGGGGCTATCTGAGAGTGAAGAGATTTTCGGGGAAGG
GGTTTCCATGGAGGATGTTTGCTTTAAGGCTAGGGGAAGATCGGATGGCTTTATACCACTTTTAGGATATCTGAAGCATGAGGATATATTTTTTCCGATCAGAATTGTCA
TCGGCCGGCGAGAAGCAGAGGAGGAGAGAGTTAGCGTGAAAGGAAAGATGAAGGAATCGAAGATGGTTCTGACACAACTTCCTTTGTCAGCAACTGTAGCAGACTTTAAA
AGCCCAGAGAAGGATTTGGAAAAAAGGGTTTCAGTGGGTGTGGAGTCTAGAAATCGGGCCTTTGTTGAGACTGCTTATGGGCCAGACTTCTCCAATGGATCTTGGGTCCA
GGATGAGGAGATGGATGTCATTAATTATCAGATGGAGATGGAGTGCAGCCTTGGGCTTGGGCCTTCAGAACACCTCTTAGGGGAAGATGGGGGTGTAGGGGGAAAAGTCA
AGCGAAATTTGGTGAAAGAGACTATTTCCCAAGAAAATCATGATATTGTCATTTTATTGGAAACCAAAAGAGAGTACTTTAATCGTCAACTGGTGAATAGTTTGTGGGGT
AGTAGGTATGTGGATTGGGAGATTGTAGAGTCGGTGGGGGCCTCGGGAGTGTCTATCTCTTTTCGTCTGAAGGATGAGGATATTAGATGGGTGTTGGGTGTTTACAGCCC
CCAAGGCCTAAAGGTAGATTGGCTTTTCGAAAGGAGTTGGGAGATCTTTTTGGCCTATGTGGCGATTGCTGGTGTGTGGCAGAGGATTTTAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCTGTTGGCGCATTTCAACTAGTATTACCCCCATTTCCTTCCTCCTCTTCTTTTAGCAAAACAACCCCTTCTCTTCGTCTTCTCCCCTTTACCACTTTGCCTCT
GCAGCGCCACGCCCACCTTAATCGGAATTCGCAACATTTCGATGCAATTTCACTCGGATATAGTTCCAAATATGGACGGAAACTCGGATTCTTCCGCTGCTTCTCAGCAC
CGAAGCATGGAGTGGTTTTCCATACTAAGAGGTTGCTTTTCAACTTTGGTTTTGGCGAAAAACTAATGCAAAATGAACTCGCTTACACCTCGACTTTTATCACTTTGGAA
AACTGCAAGGGGACTCTTTATGCCAGGGTGAGGAAGATGAGGAGGGTGATGGTAGATCGGAAAATGTTTACCCTTCGAAAAAGTAAGTGTGGGAAAAGGGTGTCGACAGA
AGAATGGAGAGGATCCGGAGTTAGGCTAGTGGAGTTGGATGTGGGTTCTTCGACTTGGGTCCGAGATTGTTTGGTGTCTGTATCGAAGGCTGGACGTCTGCTGGGGGTGG
GCAACTATGGCAGACGAGTTCTCAGGTTTTCTCAAACCTTCTTCAAACGGGAAGGGGAGGATGATGTTTGTCCCAAAGCAGAGGATTGGAAGCTGGCCTTTTCAGGCGGA
TGGATTATGGTGCTGGATATCCCACCATTTCTAAGAACCCGTCAGTTGATTGTATCAGTTGCGGATCTATGTGGGGGGCTATCTGAGAGTGAAGAGATTTTCGGGGAAGG
GGTTTCCATGGAGGATGTTTGCTTTAAGGCTAGGGGAAGATCGGATGGCTTTATACCACTTTTAGGATATCTGAAGCATGAGGATATATTTTTTCCGATCAGAATTGTCA
TCGGCCGGCGAGAAGCAGAGGAGGAGAGAGTTAGCGTGAAAGGAAAGATGAAGGAATCGAAGATGGTTCTGACACAACTTCCTTTGTCAGCAACTGTAGCAGACTTTAAA
AGCCCAGAGAAGGATTTGGAAAAAAGGGTTTCAGTGGGTGTGGAGTCTAGAAATCGGGCCTTTGTTGAGACTGCTTATGGGCCAGACTTCTCCAATGGATCTTGGGTCCA
GGATGAGGAGATGGATGTCATTAATTATCAGATGGAGATGGAGTGCAGCCTTGGGCTTGGGCCTTCAGAACACCTCTTAGGGGAAGATGGGGGTGTAGGGGGAAAAGTCA
AGCGAAATTTGGTGAAAGAGACTATTTCCCAAGAAAATCATGATATTGTCATTTTATTGGAAACCAAAAGAGAGTACTTTAATCGTCAACTGGTGAATAGTTTGTGGGGT
AGTAGGTATGTGGATTGGGAGATTGTAGAGTCGGTGGGGGCCTCGGGAGTGTCTATCTCTTTTCGTCTGAAGGATGAGGATATTAGATGGGTGTTGGGTGTTTACAGCCC
CCAAGGCCTAAAGGTAGATTGGCTTTTCGAAAGGAGTTGGGAGATCTTTTTGGCCTATGTGGCGATTGCTGGTGTGTGGCAGAGGATTTTAATGTGA
Protein sequenceShow/hide protein sequence
MSSVGAFQLVLPPFPSSSSFSKTTPSLRLLPFTTLPLQRHAHLNRNSQHFDAISLGYSSKYGRKLGFFRCFSAPKHGVVFHTKRLLFNFGFGEKLMQNELAYTSTFITLE
NCKGTLYARVRKMRRVMVDRKMFTLRKSKCGKRVSTEEWRGSGVRLVELDVGSSTWVRDCLVSVSKAGRLLGVGNYGRRVLRFSQTFFKREGEDDVCPKAEDWKLAFSGG
WIMVLDIPPFLRTRQLIVSVADLCGGLSESEEIFGEGVSMEDVCFKARGRSDGFIPLLGYLKHEDIFFPIRIVIGRREAEEERVSVKGKMKESKMVLTQLPLSATVADFK
SPEKDLEKRVSVGVESRNRAFVETAYGPDFSNGSWVQDEEMDVINYQMEMECSLGLGPSEHLLGEDGGVGGKVKRNLVKETISQENHDIVILLETKREYFNRQLVNSLWG
SRYVDWEIVESVGASGVSISFRLKDEDIRWVLGVYSPQGLKVDWLFERSWEIFLAYVAIAGVWQRILM