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Lag0006086 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006086
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:37114945..37115346
RNA-Seq ExpressionLag0006086
SyntenyLag0006086
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3475057.1 reverse transcriptase [Gossypium australe]3.6e-2443.38Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHID----SNFVFYG
        MK++ WNVR LG+++A R L   ++ +KP L+F+ME+K D  + E +R+  GF +G  + + G+  GL L WK EVEVT++ +S+ HID          G
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHID----SNFVFYG

Query:  WRGRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI
        W  RFTGFYG+P  + + +SW LL RLAE + +PW+
Subjt:  WRGRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.3e-2447.73Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYGWRGR
        MK+L WNV  LGN   FR L ++V   +PQL+F+ E+K +       ++ L FD    V S G SGGLMLLW S+  V ++  S GHIDS         R
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYGWRGR

Query:  FTGFYGNPEVFRRKDSWALLERLAELEDEPWI
        FTGFYGNP  ++R  SW LLERLA + D PWI
Subjt:  FTGFYGNPEVFRRKDSWALLERLAELEDEPWI

XP_023871998.1 uncharacterized protein LOC111984613 [Quercus suber]3.9e-2648.51Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDS--NFVFYGWR
        M  L WN R LGN R  RAL  VV  E P L+F+ME+K  V + + I++GL    G  VPS   SGGL+LLWK E+ V+V+ +SE HID+  N      +
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDS--NFVFYGWR

Query:  GRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI
         RFTGFYGNP+  RR++SW LL+RL+     PW+
Subjt:  GRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI

XP_023903659.1 uncharacterized protein LOC112015491 [Quercus suber]3.9e-2648.51Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDS--NFVFYGWR
        M  L WN R LGN R  RAL  VV  E P L+F+ME+K  V + + I++GL    G  VPS   SGGL+LLWK E+ V+V+ +SE HID+  N      +
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDS--NFVFYGWR

Query:  GRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI
         RFTGFYGNP+  RR++SW LL+RL+     PW+
Subjt:  GRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI

XP_024021734.1 uncharacterized protein LOC112091706 [Morus notabilis]2.1e-2445.11Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVF-YGWRG
        M  + WNVR LGN RAF  L  ++    P L F+ME++      E +++  GF  G++V   G SGGLML+WK EVEV ++ +S+ HID +  F +G   
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVF-YGWRG

Query:  RFTGFYGNPEVFRRKDSWALLERLAELEDEPWI
        RFTGFYGNP    R  SW LL RL  L + PW+
Subjt:  RFTGFYGNPEVFRRKDSWALLERLAELEDEPWI

TrEMBL top hitse value%identityAlignment
A0A2N9G1F9 Uncharacterized protein3.8e-2748.48Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYGWR-G
        M  L WN + LGN  A RALHH+V+ + P+++F+ME+K D  + E IR  LGFD+ + VPS G SGGL LLWK++ EV ++ +S+ HID++      +  
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYGWR-G

Query:  RFTGFYGNPEVFRRKDSWALLERLAELEDEPW
        R TGFYG PE  RR++SWALL+ L+ L+  PW
Subjt:  RFTGFYGNPEVFRRKDSWALLERLAELEDEPW

A0A2N9G8I6 Reverse transcriptase domain-containing protein3.8e-2748.48Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYGWR-G
        M  L WN + LGN  A RALHH+V+ + P+++F+ME+K D  + E IR  LGFD+ + VPS G SGGL LLWK++ EV ++ +S+ HID++      +  
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYGWR-G

Query:  RFTGFYGNPEVFRRKDSWALLERLAELEDEPW
        R TGFYG PE  RR++SWALL+ L+ L+  PW
Subjt:  RFTGFYGNPEVFRRKDSWALLERLAELEDEPW

A0A2N9HDH5 Uncharacterized protein8.5e-2747.41Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYG---W
        M  + WN R LGN RA  ALH++V+ + P+++F+ME+K DV K E IR  L F   + VPS G SGGL LLW  +V++T++ +S  HID+     G   W
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYG---W

Query:  RGRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI
          RFTGFYGNP   RR+ SWALL++L  +   PW+
Subjt:  RGRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI

A0A2N9HWG1 Reverse transcriptase domain-containing protein1.3e-2748.15Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYG---W
        M  + WN R LGN RA  ALH++V+ + P+++F+ME+K DV K E IR  L F   + VPS G SGGL LLW  +V++T++ +S  HID+     G   W
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYG---W

Query:  RGRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI
          RFTGFYGNP V RR++SWALL++L  +   PW+
Subjt:  RGRFTGFYGNPEVFRRKDSWALLERLAELEDEPWI

A0A2N9IBI9 Reverse transcriptase domain-containing protein3.8e-2748.48Show/hide
Query:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYGWR-G
        M  L WN + LGN  A RALHH+V+ + P+++F+ME+K D  + E IR  LGFD+ + VPS G SGGL LLWK++ EV ++ +S+ HID++      +  
Subjt:  MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYGWR-G

Query:  RFTGFYGNPEVFRRKDSWALLERLAELEDEPW
        R TGFYG PE  RR++SWALL+ L+ L+  PW
Subjt:  RFTGFYGNPEVFRRKDSWALLERLAELEDEPW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACGTTATATTGGAACGTTCGAAGCCTGGGGAATTCTCGAGCGTTCCGAGCTCTTCACCACGTGGTGGAGTGCGAAAAGCCCCAGCTTATGTTTGTTATGGAATC
TAAATGTGATGTGGTAAAAGGGGAGCATATTAGGAAAGGTCTTGGTTTTGATCATGGTTGGCACGTCCCGAGCTGTGGGAGCAGCGGTGGTCTTATGCTCCTTTGGAAAT
CAGAGGTTGAGGTTACTGTTAAGTTGTGGTCGGAAGGCCACATTGATTCCAACTTCGTTTTTTATGGTTGGAGAGGTAGATTTACGGGTTTTTACGGAAATCCAGAGGTT
TTTAGAAGGAAAGATTCGTGGGCTTTGCTTGAGCGTTTGGCTGAGCTTGAGGACGAGCCGTGGATCACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACGTTATATTGGAACGTTCGAAGCCTGGGGAATTCTCGAGCGTTCCGAGCTCTTCACCACGTGGTGGAGTGCGAAAAGCCCCAGCTTATGTTTGTTATGGAATC
TAAATGTGATGTGGTAAAAGGGGAGCATATTAGGAAAGGTCTTGGTTTTGATCATGGTTGGCACGTCCCGAGCTGTGGGAGCAGCGGTGGTCTTATGCTCCTTTGGAAAT
CAGAGGTTGAGGTTACTGTTAAGTTGTGGTCGGAAGGCCACATTGATTCCAACTTCGTTTTTTATGGTTGGAGAGGTAGATTTACGGGTTTTTACGGAAATCCAGAGGTT
TTTAGAAGGAAAGATTCGTGGGCTTTGCTTGAGCGTTTGGCTGAGCTTGAGGACGAGCCGTGGATCACTTGA
Protein sequenceShow/hide protein sequence
MKTLYWNVRSLGNSRAFRALHHVVECEKPQLMFVMESKCDVVKGEHIRKGLGFDHGWHVPSCGSSGGLMLLWKSEVEVTVKLWSEGHIDSNFVFYGWRGRFTGFYGNPEV
FRRKDSWALLERLAELEDEPWIT