| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 1.3e-189 | 44.47 | Show/hide |
Query: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL-------------TDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWI
N L + S+KLDRNN+ LW+++ LP++R KL+G++ +D K N + W A DQ L+GW+ NSMTTE+A+Q+ CET+++LW
Subjt: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL-------------TDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWI
Query: ALQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQ
Q G + SQ YLK RK MKM +YL MK+ D L LAG+PV DLI + GLD E+ P+VV + +Q ++W +Q+QLLTFE R EQ
Subjt: ALQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQ
Query: LQALKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQG
L L + + N A N+++ + N ++ G+N++ GRGRG+ + K CQVCG + H A CF+RF+K + +R +++AG KQG
Subjt: LQALKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQG
Query: VRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAV
N A +A+ ++ D WY DSGASNH+T +++ G + VGNG +L I + GS SK ++L L +L+VP I+KNL+S+S+L DN +
Subjt: VRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAV
Query: VVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLN
+VEF ++ C VKDK++GKV+L+G LKDGLYQ+ +K+N + AFVS K +WH R GHP+ + L+
Subjt: VVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLN
Query: QLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVEN
++L SCK+K ++N SFCEACQY K H LPF +S S A +PLEL+HTD+WGPAPI +S+G++YY+ F+DDFSRFTWI+PLK KS+ F QFK
Subjt: QLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVEN
Query: LFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFL
N EN F +IK+++CD GGE+KP+ A E GI +++CP+TS QNGR ERKHRHI E GL LLA A+MPL+YWWEAF TAV+L
Subjt: LFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFL
Query: INRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQSTT
INR+P+ V Q + PY+++ ++PDY L+ FG ACYPCL+PY QHK +HTTRCVFLGYSN+H+GY+CL+ GRI++SRHV F+E+ FPF D F++ +
Subjt: INRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQSTT
Query: LSLLI
L I
Subjt: LSLLI
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| GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum] | 4.8e-179 | 43.23 | Show/hide |
Query: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL---TDEPKGL-------QMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
N L S+KLDR+N+ LW+++ L ++R KL+G++ T+ P+ + NP++ WIA DQ L+GWL NSM ++A+Q+ CET+++LW Q
Subjt: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL---TDEPKGL-------QMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
Query: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
G + S+ YLK TRK MKM EYL MK+ SD L LAGSP+ DL+ + GLD E+ P+VV + +Q ++W VQ+QLL FE R +Q
Subjt: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
Query: LKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSR----GRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQ
G+ + N +A N+ + ++ N GN + N R GRG+GR N+K CQVC GH A C YRF++ + S A KQ
Subjt: LKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSR----GRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQ
Query: GVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNA
G + +A IA+P + D WY DSGA+NH+T + +++ G + VGNG +L I + GS +K NL L +L+VPQI+KNL+S+S+LT DN
Subjt: GVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNA
Query: VVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTL
++VEF + C VKDK++G+ LL+G LKDGLYQ+ + +P + S K +WH + GHP+ + L
Subjt: VVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTL
Query: NQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVE
+++L C +K ++ SFCEACQ+ K H LPF S S +PL LIH+D+WGPAPI S +G++YY+ F+DDFSRFTWIFPLK KSD F QFK
Subjt: NQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVE
Query: NLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVF
N EN F KIKI++CD GGE+K + + E GI +++CP+TS QNGR ERKHRH+ E GL LLA AKMPL YWWEAF TAV+
Subjt: NLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVF
Query: LINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQST
LINR+P++V + PY++++ +PDYN+L+ FG ACYPCL+PY QHK FHTTRCVF+GYSN+H+GY+C++ GRI+VSRHV F+E FPF F+D
Subjt: LINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQST
Query: TLSLL
L L
Subjt: TLSLL
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| KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 6.5e-176 | 45.25 | Show/hide |
Query: MTTEVASQVTSCETAQELWIALQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQE
MT EVA+Q+ CET+Q++W Q G + S+ +LK +TRK +KM EYL+ MK +D+L LAGS V DL++ +AGLD E+ PIVV + ++E
Subjt: MTTEVASQVTSCETAQELWIALQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQE
Query: -MTWNQVQSQLLTFEKRQEQLQALKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEK
+TW ++Q+QLLT+E R EQ+ + +++N PS+N++ N+ +++ G N+ GRGRGR + +CQVC K GH A+ C++RF K
Subjt: -MTWNQVQSQLLTFEKRQEQLQALKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEK
Query: NFNNNRGSYTAGSNNQSKQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLH
N+ + + K+ N A +A+P + D WY DSGASNH+T D N + ++ G +TVGNG L I + G S + ++ ++L LK +L+
Subjt: NFNNNRGSYTAGSNNQSKQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLH
Query: VPQISKNLISISRLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVL
VP+I+KNL+SIS+LT DN + VEFHD C VKDK++G++LLEG +KDGLYQ+P +++ R V
Subjt: VPQISKNLISISRLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVL
Query: YCSKSTWHSRFGHPSLRTLNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFP
+ K TWH + GHP+ + LN+++ C ++ EN FCEACQ+ K+H LPF NS S A +PL+L+H+D+WGPAPI+S +G++YY+ FLDD+SRFTWI+P
Subjt: YCSKSTWHSRFGHPSLRTLNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFP
Query: LKHKSDATTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALL
LK KSD F QF+ N VEN F +IK ++CD GGEFK L + GI ++ +CP+TSAQNGR ERKHRH+VE+GL LL
Subjt: LKHKSDATTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALL
Query: AHAKMPLNYWWEAFHTAVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRH
A AKMPL+YWWEAF TAVFLINR+PT V++ K PY L+++ PDY +++ FG ACYPCL+PY QHK FHTT+CVFLGYS +H+GY+CL+ TGRI++SRH
Subjt: AHAKMPLNYWWEAFHTAVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRH
Query: VCFDEEKFPFADKFMD
V F+E FPF D F++
Subjt: VCFDEEKFPFADKFMD
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| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 2.7e-190 | 45.66 | Show/hide |
Query: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHLTDEPK----------GLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
N L S+KLDR+N+ LWQ++ LPI+R +L+G++ + K + NPE++ W A DQ L+GWL NSMT +A+Q+ CET+ +LW Q
Subjt: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHLTDEPK----------GLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
Query: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
G + SQ YLK TRK MKM +YL MK+ +D L LAG+P+ DLI + GLD E+ P+VV + +Q ++W +Q+QLLTFE R EQL +
Subjt: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
Query: LKGVISINQPSANLAATGTNQNNQQASQHN-RSFNGNNNQKNSR----GRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSK
L +++N +AN+A ++ N+ S +N R N N N R GRGRGR+F K CQVCG H A CFYRF+K + +R +++A N K
Subjt: LKGVISINQPSANLAATGTNQNNQQASQHN-RSFNGNNNQKNSR----GRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSK
Query: QGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDN
QG N A +A+ ++ D WY DSGASNH+T + S++ G + VGNG +L I + GS SK ++L L +L+VP+I+KNL+S+S+L DN
Subjt: QGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDN
Query: AVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRT
++VEF ++ C VKDK++GK +L G LKDGLYQ+ S+K+ + A+VS K +WH + GHP+ +
Subjt: AVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRT
Query: LNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQV
L+ +L SC +K ++ SFCEACQY K H LPF S S A + LEL+HTD+WGPAPI SS+G++YY+ F+DDF+RFTWI+PLK KSD F QFK
Subjt: LNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQV
Query: ENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAV
N VEN F KIK ++CD GGE+KP+ A E GI +++CP+TS QNGR ERKHRHI E GL LLA AKMPLNYWWEAF TAV
Subjt: ENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAV
Query: FLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQS
+LINR+P++V K PY++L+ +PDYNSL+ FG ACYP L+PY +HK FHTTRCVFLGYSN+H+GY+C++ GRI++SRHV F+E+ FPF D F++
Subjt: FLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQS
Query: TTLSLL
L L
Subjt: TTLSLL
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| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 6.0e-190 | 44.19 | Show/hide |
Query: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHLTDEPK----------GLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
N L S+KLDR+NF LW+++ LP++R K +G++ K + NP+Y W A DQ L+GWL NSMT ++A+QV CET+++LW Q
Subjt: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHLTDEPK----------GLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
Query: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
G + S+ YLK T K MKM +YL+ MK+ +D L LAGSP+ DL+ + GLD E+ P+VV + +Q ++W Q+QLL FE R +QL
Subjt: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
Query: LKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQGVRN
I++N SAN A+ + N+ S+ + G+N++ GRGR R +PICQ+CGK GHTAA C+YRF+K SYT N +G +
Subjt: LKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQGVRN
Query: PTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAVVVE
+A +A+P + D WY DSGASNH+T L ++ G + VGNG +L I + GS +K ++ L+ +L+VP+I+KNL+S+S+LT+DN +VE
Subjt: PTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAVVVE
Query: FHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLNQLL
F +++C VKDK++GK LL+G LKDGLYQ+ S N++ P P +++ L K WH + GHP+ + L ++L
Subjt: FHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLNQLL
Query: ASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVENLFE
+K ++ +FCEACQ+ K H LPF S S A +PL+LIHTD+WGPAPI S + ++YY+ FLDDFSRFTWIFPLK KS+ F QFK
Subjt: ASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVENLFE
Query: TKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFLINR
N VEN F KIK++RCD GGE+KP+ A + GI Q++CP+TS QNGR ERKHRH+ E GL LLA AKMPL+YWWEAF TAV+LINR
Subjt: TKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFLINR
Query: MPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQSTTLSL
+P++V + PYT+++ ++PDY +L+ FG ACYPCL+PY QHK FHTTRCVFLGYSN+H+GY+C++ GR++VSRHV F+E FPF + F+D + +
Subjt: MPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQSTTLSL
Query: L
+
Subjt: L
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 1.3e-190 | 45.66 | Show/hide |
Query: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHLTDEPK----------GLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
N L S+KLDR+N+ LWQ++ LPI+R +L+G++ + K + NPE++ W A DQ L+GWL NSMT +A+Q+ CET+ +LW Q
Subjt: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHLTDEPK----------GLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
Query: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
G + SQ YLK TRK MKM +YL MK+ +D L LAG+P+ DLI + GLD E+ P+VV + +Q ++W +Q+QLLTFE R EQL +
Subjt: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
Query: LKGVISINQPSANLAATGTNQNNQQASQHN-RSFNGNNNQKNSR----GRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSK
L +++N +AN+A ++ N+ S +N R N N N R GRGRGR+F K CQVCG H A CFYRF+K + +R +++A N K
Subjt: LKGVISINQPSANLAATGTNQNNQQASQHN-RSFNGNNNQKNSR----GRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSK
Query: QGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDN
QG N A +A+ ++ D WY DSGASNH+T + S++ G + VGNG +L I + GS SK ++L L +L+VP+I+KNL+S+S+L DN
Subjt: QGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDN
Query: AVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRT
++VEF ++ C VKDK++GK +L G LKDGLYQ+ S+K+ + A+VS K +WH + GHP+ +
Subjt: AVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRT
Query: LNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQV
L+ +L SC +K ++ SFCEACQY K H LPF S S A + LEL+HTD+WGPAPI SS+G++YY+ F+DDF+RFTWI+PLK KSD F QFK
Subjt: LNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQV
Query: ENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAV
N VEN F KIK ++CD GGE+KP+ A E GI +++CP+TS QNGR ERKHRHI E GL LLA AKMPLNYWWEAF TAV
Subjt: ENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAV
Query: FLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQS
+LINR+P++V K PY++L+ +PDYNSL+ FG ACYP L+PY +HK FHTTRCVFLGYSN+H+GY+C++ GRI++SRHV F+E+ FPF D F++
Subjt: FLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQS
Query: TTLSLL
L L
Subjt: TTLSLL
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| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 2.9e-190 | 44.19 | Show/hide |
Query: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHLTDEPK----------GLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
N L S+KLDR+NF LW+++ LP++R K +G++ K + NP+Y W A DQ L+GWL NSMT ++A+QV CET+++LW Q
Subjt: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHLTDEPK----------GLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
Query: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
G + S+ YLK T K MKM +YL+ MK+ +D L LAGSP+ DL+ + GLD E+ P+VV + +Q ++W Q+QLL FE R +QL
Subjt: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
Query: LKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQGVRN
I++N SAN A+ + N+ S+ + G+N++ GRGR R +PICQ+CGK GHTAA C+YRF+K SYT N +G +
Subjt: LKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQGVRN
Query: PTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAVVVE
+A +A+P + D WY DSGASNH+T L ++ G + VGNG +L I + GS +K ++ L+ +L+VP+I+KNL+S+S+LT+DN +VE
Subjt: PTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAVVVE
Query: FHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLNQLL
F +++C VKDK++GK LL+G LKDGLYQ+ S N++ P P +++ L K WH + GHP+ + L ++L
Subjt: FHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLNQLL
Query: ASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVENLFE
+K ++ +FCEACQ+ K H LPF S S A +PL+LIHTD+WGPAPI S + ++YY+ FLDDFSRFTWIFPLK KS+ F QFK
Subjt: ASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVENLFE
Query: TKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFLINR
N VEN F KIK++RCD GGE+KP+ A + GI Q++CP+TS QNGR ERKHRH+ E GL LLA AKMPL+YWWEAF TAV+LINR
Subjt: TKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFLINR
Query: MPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQSTTLSL
+P++V + PYT+++ ++PDY +L+ FG ACYPCL+PY QHK FHTTRCVFLGYSN+H+GY+C++ GR++VSRHV F+E FPF + F+D + +
Subjt: MPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQSTTLSL
Query: L
+
Subjt: L
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 6.5e-190 | 44.47 | Show/hide |
Query: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL-------------TDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWI
N L + S+KLDRNN+ LW+++ LP++R KL+G++ +D K N + W A DQ L+GW+ NSMTTE+A+Q+ CET+++LW
Subjt: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL-------------TDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWI
Query: ALQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQ
Q G + SQ YLK RK MKM +YL MK+ D L LAG+PV DLI + GLD E+ P+VV + +Q ++W +Q+QLLTFE R EQ
Subjt: ALQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQ
Query: LQALKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQG
L L + + N A N+++ + N ++ G+N++ GRGRG+ + K CQVCG + H A CF+RF+K + +R +++AG KQG
Subjt: LQALKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQG
Query: VRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAV
N A +A+ ++ D WY DSGASNH+T +++ G + VGNG +L I + GS SK ++L L +L+VP I+KNL+S+S+L DN +
Subjt: VRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAV
Query: VVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLN
+VEF ++ C VKDK++GKV+L+G LKDGLYQ+ +K+N + AFVS K +WH R GHP+ + L+
Subjt: VVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLN
Query: QLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVEN
++L SCK+K ++N SFCEACQY K H LPF +S S A +PLEL+HTD+WGPAPI +S+G++YY+ F+DDFSRFTWI+PLK KS+ F QFK
Subjt: QLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVEN
Query: LFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFL
N EN F +IK+++CD GGE+KP+ A E GI +++CP+TS QNGR ERKHRHI E GL LLA A+MPL+YWWEAF TAV+L
Subjt: LFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFL
Query: INRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQSTT
INR+P+ V Q + PY+++ ++PDY L+ FG ACYPCL+PY QHK +HTTRCVFLGYSN+H+GY+CL+ GRI++SRHV F+E+ FPF D F++ +
Subjt: INRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQSTT
Query: LSLLI
L I
Subjt: LSLLI
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| A0A2Z6P4D5 Integrase catalytic domain-containing protein | 2.3e-179 | 43.23 | Show/hide |
Query: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL---TDEPKGL-------QMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
N L S+KLDR+N+ LW+++ L ++R KL+G++ T+ P+ + NP++ WIA DQ L+GWL NSM ++A+Q+ CET+++LW Q
Subjt: NLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL---TDEPKGL-------QMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQ
Query: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
G + S+ YLK TRK MKM EYL MK+ SD L LAGSP+ DL+ + GLD E+ P+VV + +Q ++W VQ+QLL FE R +Q
Subjt: EFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLTFEKRQEQLQA
Query: LKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSR----GRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQ
G+ + N +A N+ + ++ N GN + N R GRG+GR N+K CQVC GH A C YRF++ + S A KQ
Subjt: LKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSR----GRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQ
Query: GVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNA
G + +A IA+P + D WY DSGA+NH+T + +++ G + VGNG +L I + GS +K NL L +L+VPQI+KNL+S+S+LT DN
Subjt: GVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNA
Query: VVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTL
++VEF + C VKDK++G+ LL+G LKDGLYQ+ + +P + S K +WH + GHP+ + L
Subjt: VVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTL
Query: NQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVE
+++L C +K ++ SFCEACQ+ K H LPF S S +PL LIH+D+WGPAPI S +G++YY+ F+DDFSRFTWIFPLK KSD F QFK
Subjt: NQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVE
Query: NLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVF
N EN F KIKI++CD GGE+K + + E GI +++CP+TS QNGR ERKHRH+ E GL LLA AKMPL YWWEAF TAV+
Subjt: NLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVF
Query: LINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQST
LINR+P++V + PY++++ +PDYN+L+ FG ACYPCL+PY QHK FHTTRCVF+GYSN+H+GY+C++ GRI+VSRHV F+E FPF F+D
Subjt: LINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDEEKFPFADKFMDQST
Query: TLSLL
L L
Subjt: TLSLL
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| A0A803PM38 Uncharacterized protein | 8.5e-182 | 42.89 | Show/hide |
Query: PAFTNLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL-------------TD---EPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCE
P F + LNQ ++KLDRNNF LW+ + I+R ++L+G+L TD + NP ++ WI DQLL+GWLY SMT +A +V C+
Subjt: PAFTNLLNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL-------------TD---EPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCE
Query: TAQELWIALQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLT
++ LW AL+E +G S ++ D + +Q RK ++ M +YL + ++D L LAG P L+S V++GLD E+ P+V++I+ + TW Q+Q LL+
Subjt: TAQELWIALQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQ-EMTWNQVQSQLLT
Query: FEKRQEQLQALKGVISIN----QPSANLAATGTN--QNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRG
+ + E+L + G + PSA+LA G + N + +NR + NN N+R RGRG +P CQVCGK GH+AA C+ R
Subjt: FEKRQEQLQALKGVISIN----QPSANLAATGTN--QNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRG
Query: SYTAGSNNQSKQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRN-LMLKGLLHVPQISK
GASNH+TS++N + LK +Y G +++TV NG +LPIH IG + + + L+LK +LHVP I+K
Subjt: SYTAGSNNQSKQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRN-LMLKGLLHVPQISK
Query: NLISISRLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQI-PPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKS
NL+SIS+LT DN V VEF C VKDK +G+V+L+G LKDGLYQ P S S + +S VS + S VT P ++ +L K
Subjt: NLISISRLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQI-PPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKS
Query: TWHSRFGHPSLRTLNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKS
WH R GHPS+R L+ +L +K IN +LSFC+ACQ KSH LPF + RAT PLEL+HTD+WGP+PI S+ ++YYI F+DDFSR+TWI+PLK KS
Subjt: TWHSRFGHPSLRTLNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKS
Query: DATTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKM
+A F QFK VEN F +++K V+ D GGE++ F S+ GI Q CPHTS QNGR ERKHRHIVE GL LLA A +
Subjt: DATTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKM
Query: PLNYWWEAFHTAVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDE
P YWW+AF TAV+LINR+PT VL+ K P+ VL+ +QPDY L+VFG +C+PCLR YQ HKF FH+T+CV LGYS+ H+GY+CLS TGR+Y+SR V F+E
Subjt: PLNYWWEAFHTAVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPTGRIYVSRHVCFDE
Query: EKFPFADKFMDQS---TTLSLLI
++FPF F++ + T +S+L+
Subjt: EKFPFADKFMDQS---TTLSLLI
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.4e-40 | 23.92 | Show/hide |
Query: MPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQEFYGVQSI-SQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKD
MPN D W A++ + ++ + TS TA+++ L Y +S+ SQ KR+L M + + + L AG+ ++ D
Subjt: MPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQEFYGVQSI-SQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKD
Query: LISYVIAGLDEEFTPIVVVIQ---NQEMTWNQVQSQLLTFEKRQEQLQALKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTF
IS+++ L + I+ I+ + +T V+++LL E I I T++ A HN + NN +R + F
Subjt: LISYVIAGLDEEFTPIVVVIQ---NQEMTWNQVQSQLLTFEKRQEQLQALKGVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTF
Query: -GNS--KPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVG
GNS K C CG+ GH CF+ +++ NN + G+ + + + + +DSGAS+HL +D + T + +I V
Subjt: -GNS--KPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVG
Query: NGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNV
+ + V + L+ +L + + NL+S+ RL + + +EF S + K+GL + G ++ + +
Subjt: NGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNV
Query: TFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTL-----NQLLASCKLKTKINENLSFCEACQYAKSHRLPFP--NSKSRATKPLE
F A+ +N + WH RFGH S L + + L + + CE C K RLPF K+ +PL
Subjt: TFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTL-----NQLLASCKLKTKINENLSFCEACQYAKSHRLPFP--NSKSRATKPLE
Query: LIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFA
++H+D+ GP + + Y++ F+D F+ + + +K+KSD ++F+ F + E F K+ + D G + N + F
Subjt: LIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFA
Query: SEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFLINRMPTAVL--QGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPY
+ GI L PHT NG ER R I E +++ AK+ ++W EA TA +LINR+P+ L K PY + +N++P LRVFG+ Y ++
Subjt: SEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFLINRMPTAVL--QGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPY
Query: QQHKFDFHTTRCVFLGYSNNHRGYRCLSPTG-RIYVSRHVCFDE
+Q KFD + + +F+GY N G++ + V+R V DE
Subjt: QQHKFDFHTTRCVFLGYSNNHRGYRCLSPTG-RIYVSRHVCFDE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.3e-49 | 25.29 | Show/hide |
Query: NNFLLWQNIALPILRSYKLEGHLTDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQEFYGVQSISQKDYLKRMLQQTRK
N F WQ +L L L + K + + + W D+ + ++ +V + + +TA+ +W L+ Y ++++ K YLK+ L
Subjt: NNFLLWQNIALPILRSYKLEGHLTDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQEFYGVQSISQKDYLKRMLQQTRK
Query: WSMKMTE------YLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQEMT--WNQVQSQLLTFEKRQEQLQALKGVISINQPSANLAA
+++ M+E +L++ L G ++ +D ++ L + + I + + T V S LL EK +++ + NQ A L
Subjt: WSMKMTE------YLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQEMT--WNQVQSQLLTFEKRQEQLQALKGVISINQPSANLAA
Query: TGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQGVRNPTAMIATPENL-----
G ++ Q++S +N +G + +R + R R C C + GH F R N +G T+G N N AM+ +N+
Subjt: TGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTFGNSKPICQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSKQGVRNPTAMIATPENL-----
Query: ----------HDNAWYMDSGASNHLT--SDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFR-NLMLKGLLHVPQISKNLISISRLTMDNAVV
++ W +D+ AS+H T DL + D+ +K +GN I IG I + L+LK + HVP + NLIS L D
Subjt: ----------HDNAWYMDSGASNHLT--SDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFR-NLMLKGLLHVPQISKNLISISRLTMDNAVV
Query: VEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLNQ
+ + L K + V+ +G + LY+ T + QD+ S WH R GH S + L
Subjt: VEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRTLNQ
Query: LLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVENL
L + + C+ C + K HR+ F S R L+L+++D+ GP I S G +Y+++F+DD SR W++ LK K +F++F VE
Subjt: LLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKNQVENL
Query: FETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFLI
K+K +R D GG FE + S GI + P T NG ER +R IVE ++L AK+P ++W EA TA +LI
Subjt: FETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHTAVFLI
Query: NRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPT-GRIYVSRHVCFDEEK
NR P+ L ++P V N++ Y+ L+VFG + + Q+ K D + C+F+GY + GYR P ++ SR V F E +
Subjt: NRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLSPT-GRIYVSRHVCFDEEK
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| Q03494 Transposon Ty2-DR2 Gag-Pol polyprotein | 6.0e-15 | 22.82 | Show/hide |
Query: KQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSD---LNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGL--LHVPQISKNLISIS
+Q PT I + + L D+ +DSGAS L L++ T S+ I +PI++IG+ ++ F+N + LH P I+ +L+S+S
Subjt: KQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSD---LNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGL--LHVPQISKNLISIS
Query: RLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFG
L N C ++ LE S DG P H +SKK + + +S++ N + V L+ H G
Subjt: RLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFG
Query: HPSLRTLNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATK-----------PLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPL
H + R++ + L + ++ + A Y L ++K R K P + +HTD++GP + Y+ISF D+ +RF W++PL
Subjt: HPSLRTLNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATK-----------PLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPL
Query: KHKSDATTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEF--KPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLAL
+ + + L N+F + + ++ N F ++ +++ D G E+ K L F + GI S +G ER +R ++ L
Subjt: KHKSDATTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEF--KPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLAL
Query: LAHAKMPLNYWWEAFHTAVFLINRM
L + +P + W+ A + + N +
Subjt: LAHAKMPLNYWWEAFHTAVFLINRM
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.4e-119 | 35.13 | Show/hide |
Query: LNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL---------TDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQEFY
+N + KL N+L+W + Y+L G L T NP+Y W D+L+ + +++ V V+ TA ++W L++ Y
Subjt: LNQATSIKLDRNNFLLWQNIALPILRSYKLEGHL---------TDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIALQEFY
Query: GVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIV--VVIQNQEMTWNQVQSQLLTFEKRQEQLQALK
S L+ L+Q K + + +Y+ + + D L L G P+D + + V+ L EE+ P++ + ++ T ++ +LL E + + +
Subjt: GVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIV--VVIQNQEMTWNQVQSQLLTFEKRQEQLQALK
Query: GVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTF----GNSKPI---CQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSK
VI I + + T T NN +++NR N NNN + + F SKP CQ+CG GH+A C ++F ++ S S
Subjt: GVISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRGRTF----GNSKPI---CQVCGKAGHTAAVCFYRFEKNFNNNRGSYTAGSNNQSK
Query: QGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDN
Q P A +A N W +DSGA++H+TSD NNL+L YTG + V +G +PI GS+ + +K R L L +L+VP I KNLIS+ RL N
Subjt: QGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISISRLTMDN
Query: AVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRT
V VEF + VKD +G LL+G KD LY+ P + Q VS L SP S + S+WH+R GHP+
Subjt: AVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKSTWHSRFGHPSLRT
Query: LNQLLASCKLKTKINENLSF--CEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKN
LN ++++ L +N + F C C KS+++PF S +T+PLE I++D+W +PI S + Y+YY+ F+D F+R+TW++PLK KS F FK
Subjt: LNQLLASCKLKTKINENLSF--CEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDATTLFKQFKN
Query: QVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHT
N +EN F+T+I D GGEF L + S+ GI + PHT NG ERKHRHIVETGL LL+HA +P YW AF
Subjt: QVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPLNYWWEAFHT
Query: AVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLS-PTGRIYVSRHVCFDEEKFPFAD
AV+LINR+PT +LQ + P+ L+ P+Y+ LRVFG ACYP LRPY QHK D + +CVFLGYS Y CL T R+Y+SRHV FDE FPF++
Subjt: AVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLS-PTGRIYVSRHVCFDEEKFPFAD
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.9e-114 | 33.91 | Show/hide |
Query: TNLL--NQATSIKLDRNNFLLWQNIALPILRSYKLEGHL---------TDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIA
TN+L N + KL N+L+W + Y+L G L T + NP+Y W D+L+ + +++ V V+ TA ++W
Subjt: TNLL--NQATSIKLDRNNFLLWQNIALPILRSYKLEGHL---------TDEPKGLQMPNPEYDVWIAADQLLVGWLYNSMTTEVASQVTSCETAQELWIA
Query: LQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIV--VVIQNQEMTWNQVQSQLLTFEKRQEQ
L++ Y S L+ + + D L L G P+D + + V+ L +++ P++ + ++ + ++ +L+ E +
Subjt: LQEFYGVQSISQKDYLKRMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIV--VVIQNQEMTWNQVQSQLLTFEKRQEQ
Query: LQALKGV-ISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNS-RGRGRGRTFGNSKP-----ICQVCGKAGHTAAVC--FYRFEKNFNNNRGSYTA
L + + V I+ N + T NQNN+ NR++N NNN+ NS + G N +P CQ+C GH+A C ++F+ N + +
Subjt: LQALKGV-ISINQPSANLAATGTNQNNQQASQHNRSFNGNNNQKNS-RGRGRGRTFGNSKP-----ICQVCGKAGHTAAVC--FYRFEKNFNNNRGSYTA
Query: GSNNQSKQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISI
S P A +A + N W +DSGA++H+TSD NNL+ YTG + + +G +PI GS+ + + R+L L +L+VP I KNLIS+
Subjt: GSNNQSKQGVRNPTAMIATPENLHDNAWYMDSGASNHLTSDLNNLTLKSDYTGMKQITVGNGCQLPIHSIGSSVIYSKFRNLMLKGLLHVPQISKNLISI
Query: SRLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKST---WH
RL N V VEF + VKD +G LL+G KD LY+ P + Q VS + SP CSK+T WH
Subjt: SRLTMDNAVVVEFHDSFCLVKDKVSGKVLLEGSLKDGLYQIPPLGAASHSRLQEVSKKNVTFVAFVSRMASRNQDDPMLVTSPGSHLVLYCSKST---WH
Query: SRFGHPSLRTLNQLLASCKLKT-KINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDA
SR GHPSL LN ++++ L + L C C KSH++PF NS ++KPLE I++D+W +PI S + Y+YY+ F+D F+R+TW++PLK KS
Subjt: SRFGHPSLRTLNQLLASCKLKT-KINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSSNGYQYYISFLDDFSRFTWIFPLKHKSDA
Query: TTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPL
F FK + VEN F+T+I + D GGEF L + S+ GI + PHT NG ERKHRHIVE GL LL+HA +P
Subjt: TTLFKQFKNQVENLFETKIKIVRCDEGGNQVENLFETKIKIVRCDEGGEFKPLIHFASEVGIHIQLACPHTSAQNGRVERKHRHIVETGLALLAHAKMPL
Query: NYWWEAFHTAVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLS-PTGRIYVSRHVCFDEE
YW AF AV+LINR+PT +LQ + P+ L+ + P+Y L+VFG ACYP LRPY +HK + + +C F+GYS Y CL PTGR+Y SRHV FDE
Subjt: NYWWEAFHTAVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACYPCLRPYQQHKFDFHTTRCVFLGYSNNHRGYRCLS-PTGRIYVSRHVCFDEE
Query: KFPFADKFMDQSTT
FPF+ ST+
Subjt: KFPFADKFMDQSTT
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.5e-05 | 24.36 | Show/hide |
Query: IKLDRNNFLLWQNIALPILRSYKLEGHLTDEPKGLQMPNPEYDV-WIAADQLLVGWLYNSMTTE--VASQVTSCETAQELWIALQEFYGVQSISQKDYLK
+ ++ +N+ W+ + L S+ + GH+ G +P DV W D ++ LY ++T + S VTS T++++W+ ++ + ++ L
Subjt: IKLDRNNFLLWQNIALPILRSYKLEGHLTDEPKGLQMPNPEYDV-WIAADQLLVGWLYNSMTTE--VASQVTSCETAQELWIALQEFYGVQSISQKDYLK
Query: RMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQE--MTWNQVQSQLLTFEKRQEQLQALKGVISINQPSANL
L+ M++ +Y MK +D+L PV ++L+ YV+ GL+ +F I+ VI++++ +++ + L QE+ LK I N +
Subjt: RMLQQTRKWSMKMTEYLSLMKSYSDNLYLAGSPVDPKDLISYVIAGLDEEFTPIVVVIQNQE--MTWNQVQSQLLTFEKRQEQLQALKGVISINQPSANL
Query: AATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRG
+++ T +A NQ RGRGRG
Subjt: AATGTNQNNQQASQHNRSFNGNNNQKNSRGRGRG
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 6.6e-09 | 36.99 | Show/hide |
Query: WHSRFGHPSLRTLNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSS
WHSR H S R + L+ L + +L FCE C Y K+HR+ F + PL+ +H+DLWG + S
Subjt: WHSRFGHPSLRTLNQLLASCKLKTKINENLSFCEACQYAKSHRLPFPNSKSRATKPLELIHTDLWGPAPITSS
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 3.7e-04 | 32.35 | Show/hide |
Query: HRHIVETGLALLAHAKMPLNYWWEAFHTAVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACY
+R I+E ++L +P + +A +TAV +IN+ P+ + VP V + P Y+ LR FG Y
Subjt: HRHIVETGLALLAHAKMPLNYWWEAFHTAVFLINRMPTAVLQGKVPYTVLYNEQPDYNSLRVFGSACY
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