; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006108 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006108
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr6:37427408..37427716
RNA-Seq ExpressionLag0006108
SyntenyLag0006108
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4361328.1 hypothetical protein G4B88_015920 [Cannabis sativa]5.5e-1235.64Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA
        +P+K+++FVW+ +HN+IP    L   H+    +CP+CK++ ET  HALF C RA+E+W L S  L   LA     ++     +D++  S  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA

Query:  I
        I
Subjt:  I

KAF4368669.1 hypothetical protein F8388_003370 [Cannabis sativa]5.5e-1235.64Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA
        +P+K+++FVW+ +HN+IP    L   H+    +CP+CK++ ET  HALF C RA+E+W L S  L   LA     ++     +D++  S  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA

Query:  I
        I
Subjt:  I

KAF4378452.1 hypothetical protein F8388_021646 [Cannabis sativa]1.9e-1234.65Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIAD-DSRLSLERICVGAWA
        +P+K+++FVW+ +HN +P    L   H+    +CP+CK + ET  HALF C RA+E+W + S +L   LA     ++  L +++  S L  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIAD-DSRLSLERICVGAWA

Query:  I
        I
Subjt:  I

XP_030498122.1 uncharacterized protein LOC115713779 [Cannabis sativa]7.1e-1233.66Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIA-DDSRLSLERICVGAWA
        +P+K+++FVW+ +HN +P    L   H+    +CP+CK + ET  HALF C RA+E+W + + +L   LA     ++  L ++   S L  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIA-DDSRLSLERICVGAWA

Query:  I
        I
Subjt:  I

XP_030508858.1 uncharacterized protein LOC115723499 [Cannabis sativa]5.5e-1235.64Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA
        +P+K+++FVW+ +HN+IP    L   H+    +CP+CK++ ET  HALF C RA+E+W L S  L   LA     ++     +D++  S  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA

Query:  I
        I
Subjt:  I

TrEMBL top hitse value%identityAlignment
A0A7J6ESF6 zf-RVT domain-containing protein2.6e-1235.64Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA
        +P+K+++FVW+ +HN+IP    L   H+    +CP+CK++ ET  HALF C RA+E+W L S  L   LA     ++     +D++  S  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA

Query:  I
        I
Subjt:  I

A0A7J6FFK9 zf-RVT domain-containing protein2.6e-1235.64Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA
        +P+K+++FVW+ +HN+IP    L   H+    +CP+CK++ ET  HALF C RA+E+W L S  L   LA     ++     +D++  S  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA

Query:  I
        I
Subjt:  I

A0A7J6G6P2 Peptidase A1 domain-containing protein9.1e-1334.65Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIAD-DSRLSLERICVGAWA
        +P+K+++FVW+ +HN +P    L   H+    +CP+CK + ET  HALF C RA+E+W + S +L   LA     ++  L +++  S L  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIAD-DSRLSLERICVGAWA

Query:  I
        I
Subjt:  I

A0A803NJJ8 Uncharacterized protein2.6e-1235.64Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA
        +P+K+++FVW+ +HN+IP    L   H+    +CP+CK++ ET  HALF C RA+E+W L S  L   LA     ++     +D++  S  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLS-LERICVGAWA

Query:  I
        I
Subjt:  I

A0A803PH33 Uncharacterized protein2.6e-1233.66Show/hide
Query:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIAD-DSRLSLERICVGAWA
        +P+K+++FVW+ +HN +P    L   H+    +CP+CK + ET  HALF C RA+E+W +   +L   LA     ++  L +++  S L  E+     W+
Subjt:  VPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIAD-DSRLSLERICVGAWA

Query:  I
        I
Subjt:  I

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein2.6e-0433.33Show/hide
Query:  KMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDL
        K+K+F+W++   ++P    L   H+     C  C    ETS H LF C  A ++W+L
Subjt:  KMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDL

AT3G25270.1 Ribonuclease H-like superfamily protein4.3e-0738.18Show/hide
Query:  KMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIW
        K+K F+W+    ++ T DNL+  H+     C  C +E ETS H  F C  AQ++W
Subjt:  KMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGTGCCCAATAAGATGAAAGTTTTTGTTTGGAGATCCTATCACAATTCCATTCCAACTATGGACAATCTTCGACATCACCATGTTCCGGTTGAGGGATTCTGCCC
AGTCTGTAAGGAGGAGACGGAGACCTCTGACCATGCACTGTTTCAATGCCAGAGAGCTCAGGAGATATGGGATCTTCTTTCGCCGTCACTGAAAGAAGGTCTGGCTGATC
ACATCGATATTAAGGATCATTGGTTGCGTATAGCGGATGATTCAAGGTTGAGTCTTGAACGTATTTGTGTGGGGGCTTGGGCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGTGCCCAATAAGATGAAAGTTTTTGTTTGGAGATCCTATCACAATTCCATTCCAACTATGGACAATCTTCGACATCACCATGTTCCGGTTGAGGGATTCTGCCC
AGTCTGTAAGGAGGAGACGGAGACCTCTGACCATGCACTGTTTCAATGCCAGAGAGCTCAGGAGATATGGGATCTTCTTTCGCCGTCACTGAAAGAAGGTCTGGCTGATC
ACATCGATATTAAGGATCATTGGTTGCGTATAGCGGATGATTCAAGGTTGAGTCTTGAACGTATTTGTGTGGGGGCTTGGGCTATTTGA
Protein sequenceShow/hide protein sequence
MWVPNKMKVFVWRSYHNSIPTMDNLRHHHVPVEGFCPVCKEETETSDHALFQCQRAQEIWDLLSPSLKEGLADHIDIKDHWLRIADDSRLSLERICVGAWAI