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Lag0006115 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006115
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:37531568..37532552
RNA-Seq ExpressionLag0006115
SyntenyLag0006115
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG56835.1 hypothetical protein EZV62_018148 [Acer yangbiense]3.9e-0732.14Show/hide
Query:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV-YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDESELRVWGETLRVKTMVDVNKLLRRCLAVSK
        +IW   G+V ++ VG+N ++  F N+  +NK    K W   H++P++C+N +    LA  +G    +  ES    WG+ +RVK  +D+ K L+R L + K
Subjt:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV-YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDESELRVWGETLRVKTMVDVNKLLRRCLAVSK

Query:  EPEKIAVVLRKE
          +   V L+ E
Subjt:  EPEKIAVVLRKE

XP_042958061.1 uncharacterized protein LOC122293581 [Carya illinoinensis]1.3e-0525.87Show/hide
Query:  MPKIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV------------------------------YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMED
        +PKIW  EGK+  K+VG+N ++ +FK+R  K +V                              +  FW   H++P   +       L + +G    ++ 
Subjt:  MPKIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV------------------------------YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMED

Query:  ESELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVLRKE
        +     WG+ LRVK M+D+ K L R   +S++ EK  +  + E
Subjt:  ESELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVLRKE

XP_042958241.1 uncharacterized protein LOC122293864 [Carya illinoinensis]1.3e-0525.87Show/hide
Query:  MPKIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV------------------------------YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMED
        +PKIW  EGK+  K+VG+N ++ +FK+R  K +V                              +  FW   H++P   +       L + +G    ++ 
Subjt:  MPKIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV------------------------------YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMED

Query:  ESELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVLRKE
        +     WG+ LRVK M+D+ K L R   +S++ EK  +  + E
Subjt:  ESELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVLRKE

XP_042961424.1 uncharacterized protein LOC122296079 [Carya illinoinensis]1.3e-0525.87Show/hide
Query:  MPKIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV------------------------------YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMED
        +PKIW  EGK+  K+VG+N ++ +FK+R  K +V                              +  FW   H++P   +       L + +G    ++ 
Subjt:  MPKIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV------------------------------YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMED

Query:  ESELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVLRKE
        +     WG+ LRVK M+D+ K L R   +S++ EK  +  + E
Subjt:  ESELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVLRKE

XP_042966365.1 uncharacterized protein LOC122299926 [Carya illinoinensis]1.5e-0627.27Show/hide
Query:  MPKIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV------------------------------YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMED
        +PKIW  EGK   K+VG+N ++ +FK+R  K +V                              +  FW   H++P   +       L + +G    ++ 
Subjt:  MPKIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV------------------------------YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMED

Query:  ESELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVLRKE
        +     WG+ LRVK M+D+ KLL R   +S++ EK  +  R E
Subjt:  ESELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVLRKE

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein1.4e-0527.21Show/hide
Query:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKVY------------------------------VKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDES
        +IW   G+V+++ VG+N ++  F N+  +NKV+                                FW   H++P++C+N +    LA  +G    +  ES
Subjt:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKVY------------------------------VKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDES

Query:  ELRVWGETLRVKTMVDVNKLLRRCLAVS-KEPEKIAVVLRKEENVQD
            WG+ +RVK  VD+ K L+R L +   + E+I +V  K E + D
Subjt:  ELRVWGETLRVKTMVDVNKLLRRCLAVS-KEPEKIAVVLRKEENVQD

A0A5C7HJ98 Uncharacterized protein1.9e-0732.14Show/hide
Query:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV-YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDESELRVWGETLRVKTMVDVNKLLRRCLAVSK
        +IW   G+V ++ VG+N ++  F N+  +NK    K W   H++P++C+N +    LA  +G    +  ES    WG+ +RVK  +D+ K L+R L + K
Subjt:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKV-YVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDESELRVWGETLRVKTMVDVNKLLRRCLAVSK

Query:  EPEKIAVVLRKE
          +   V L+ E
Subjt:  EPEKIAVVLRKE

A0A5C7IJL3 CCHC-type domain-containing protein1.4e-0526.28Show/hide
Query:  IWGVEGKVQMKKVGKNVYICKFKNRRTKNKVYVK------------------------------FWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDESE
        +W   GKV+++ VG+NV++  F+N   +++V+ +                              FW   H++P++C+N + A  LA  +G    +  ES 
Subjt:  IWGVEGKVQMKKVGKNVYICKFKNRRTKNKVYVK------------------------------FWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDESE

Query:  LRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVL
           WG+ LRVK  +D+++ L+R L +S +     VV+
Subjt:  LRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVL

A0A5C7IU01 CCHC-type domain-containing protein6.7e-0526.81Show/hide
Query:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKVY------------------------------VKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDES
        +IW   G+V+++ VG NV++  F NR  +++V+                                FW   H++P++C+N + A  LA  +G    +  ES
Subjt:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKVY------------------------------VKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDES

Query:  ELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVL
            WG  LRVK  +D++K L+R L +     K  +V+
Subjt:  ELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVL

A0A5C7IXM0 CCHC-type domain-containing protein1.5e-0423.81Show/hide
Query:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKVY------------------------------VKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDES
        ++W   G V+++ VG+N+++  F N   +N+++                               +FW   H++P++C+N + A  LA  +G    +  ES
Subjt:  KIWGVEGKVQMKKVGKNVYICKFKNRRTKNKVY------------------------------VKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDES

Query:  ELRVWGETLRVKTMVDVNKLLRRCLAVS-KEPEKIAVVLRKEENVQD
            WG+ LRVK ++D+++ L+R L +   + + + VV  K E + +
Subjt:  ELRVWGETLRVKTMVDVNKLLRRCLAVS-KEPEKIAVVLRKEENVQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAAGATTTGGGGAGTAGAAGGAAAGGTTCAAATGAAAAAAGTAGGGAAGAATGTCTATATATGCAAATTCAAGAATAGAAGAACAAAGAACAAAGTGTATGTGAA
ATTTTGGTTCCATTTCCATAACTTACCAGTGGTGTGTTTGAACACGAAGTATGCAGTAGCTTTAGCAAATTTGGTTGGAACCTTTGATAGCATGGAAGATGAAAGCGAAT
TGAGAGTTTGGGGAGAAACTCTTCGAGTGAAAACAATGGTGGATGTTAACAAGCTACTGAGAAGATGCTTAGCCGTGTCAAAAGAGCCAGAAAAAATAGCCGTTGTGTTA
AGAAAAGAGGAGAATGTTCAGGATAAGGAAGATAATCAGTTGGCAGCAAAAGAAAAGGACACCCAGCCAAGCGGTGAAAAGACAAAAGGGAAAAAAGAGGACCCACATGG
GGGTGGAGTTAAGGTCCATAGTCAGATTGAAAATAAGGAGGAAAAAAAGACCCACCAAGAGAAAGGTAAAGGAAACAGTAGCCCAAGTTTCAAAGCGGTGAAAAAGTGGA
AGAGGTTGGCGAGAAGTGATCCTATGCAGCAAGATAATCTGGAAGAAACATTGTCAAAAGTGGGGGAAAAGCATAACCTGAAAGAACAAGGCATTGAGGAAGCTACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGAAGATTTGGGGAGTAGAAGGAAAGGTTCAAATGAAAAAAGTAGGGAAGAATGTCTATATATGCAAATTCAAGAATAGAAGAACAAAGAACAAAGTGTATGTGAA
ATTTTGGTTCCATTTCCATAACTTACCAGTGGTGTGTTTGAACACGAAGTATGCAGTAGCTTTAGCAAATTTGGTTGGAACCTTTGATAGCATGGAAGATGAAAGCGAAT
TGAGAGTTTGGGGAGAAACTCTTCGAGTGAAAACAATGGTGGATGTTAACAAGCTACTGAGAAGATGCTTAGCCGTGTCAAAAGAGCCAGAAAAAATAGCCGTTGTGTTA
AGAAAAGAGGAGAATGTTCAGGATAAGGAAGATAATCAGTTGGCAGCAAAAGAAAAGGACACCCAGCCAAGCGGTGAAAAGACAAAAGGGAAAAAAGAGGACCCACATGG
GGGTGGAGTTAAGGTCCATAGTCAGATTGAAAATAAGGAGGAAAAAAAGACCCACCAAGAGAAAGGTAAAGGAAACAGTAGCCCAAGTTTCAAAGCGGTGAAAAAGTGGA
AGAGGTTGGCGAGAAGTGATCCTATGCAGCAAGATAATCTGGAAGAAACATTGTCAAAAGTGGGGGAAAAGCATAACCTGAAAGAACAAGGCATTGAGGAAGCTACCTAG
Protein sequenceShow/hide protein sequence
MPKIWGVEGKVQMKKVGKNVYICKFKNRRTKNKVYVKFWFHFHNLPVVCLNTKYAVALANLVGTFDSMEDESELRVWGETLRVKTMVDVNKLLRRCLAVSKEPEKIAVVL
RKEENVQDKEDNQLAAKEKDTQPSGEKTKGKKEDPHGGGVKVHSQIENKEEKKTHQEKGKGNSSPSFKAVKKWKRLARSDPMQQDNLEETLSKVGEKHNLKEQGIEEAT