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Lag0006130 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006130
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:37834292..37839849
RNA-Seq ExpressionLag0006130
SyntenyLag0006130
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5449841.1 hypothetical protein F2P56_030246 [Juglans regia]1.7e-2048.18Show/hide
Query:  EVEVTIRSFSQFHIDVSI-KWECKSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDME
        E+ V+I SFS++HID  I + +   WRFTG+YG+P+ S R  TW+L+R L        +VGGDFN  L   EK GG P    Q++ FR VM+DC LQD+ 
Subjt:  EVEVTIRSFSQFHIDVSI-KWECKSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDME

Query:  FSGDLFTWTN
        F G  FTW N
Subjt:  FSGDLFTWTN

KAG0550343.1 hypothetical protein BDA96_01G330000 [Sorghum bicolor]2.3e-2046.02Show/hide
Query:  VEVTIRSFSQFHIDVSIKW-ECKSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDMEF
        ++V +R+FS  HIDV ++  +   WRFTG+YG P T  R  TW LLR L++Q+D   +  GDFN  L   EKEGG    + Q+  FR+ M DC LQD+ F
Subjt:  VEVTIRSFSQFHIDVSIKW-ECKSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDMEF

Query:  SGDLFTWTNRHDR
         GD++TW N + R
Subjt:  SGDLFTWTNRHDR

XP_041001573.1 uncharacterized protein LOC121247264 [Juglans microcarpa x Juglans regia]1.3e-2049.09Show/hide
Query:  EVEVTIRSFSQFHIDVSIKWE-CKSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDME
        ++ V ++SFS++HIDV IK E    WRFTGLYGNP  S R  TW+L+R L + +    ++GG+FN  L   EK GG P   TQI +FR+V+ DC L+D+ 
Subjt:  EVEVTIRSFSQFHIDVSIKWE-CKSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDME

Query:  FSGDLFTWTN
        F G  FTW N
Subjt:  FSGDLFTWTN

XP_042973089.1 uncharacterized protein LOC122304890 [Carya illinoinensis]7.9e-2145.76Show/hide
Query:  DEVEVTIRSFSQFHIDVSIKWEC--KSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQD
        DE    I ++S++H+ V +K E   K W FTG YG+  +  R+ +WDLLR+L   +D A  VGGDFN  L H EK GG    E+QI LFR+ ++DCGL D
Subjt:  DEVEVTIRSFSQFHIDVSIKWEC--KSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQD

Query:  MEFSGDLFTWTNRHDRES
        + + G+ FTW+N H  +S
Subjt:  MEFSGDLFTWTNRHDRES

XP_042980093.1 uncharacterized protein LOC122310274 [Carya illinoinensis]9.3e-2246.61Show/hide
Query:  DEVEVTIRSFSQFHIDVSIKWEC--KSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQD
        DE    I ++S++H+ V +K E   K W FTG YG+P +  R+ +WDLLR+L   +D A  VGGDF   L H EK GG    ETQI LFR+ ++DCGL D
Subjt:  DEVEVTIRSFSQFHIDVSIKWEC--KSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQD

Query:  MEFSGDLFTWTNRHDRES
        + + G+ FTW+N+H  +S
Subjt:  MEFSGDLFTWTNRHDRES

TrEMBL top hitse value%identityAlignment
A0A2N9HKV4 Uncharacterized protein6.5e-2144.53Show/hide
Query:  PRTNQGDDSNAFEPTVEDEVEVTIRSFSQFHIDVSIKWECK-SWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQET
        PR N+G     F    + ++ +TI+SFS  HID  I    + +WRFTG YG P T  R H+W++LR L+ Q        GDFN  +  EEK+GG P  + 
Subjt:  PRTNQGDDSNAFEPTVEDEVEVTIRSFSQFHIDVSIKWECK-SWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQET

Query:  QIQLFRDVMDDCGLQDMEFSGDLFTWTN
        Q+Q FR V+DDCG QD+ F+G  FTW N
Subjt:  QIQLFRDVMDDCGLQDMEFSGDLFTWTN

A0A2N9I6L8 Reverse transcriptase domain-containing protein1.1e-2047.27Show/hide
Query:  EVEVTIRSFSQFHIDVSIKWECK-SWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDME
        ++ +TI+SFS  HID  I    + +WRFTG YG P T  R H+W++LR L+ Q        GDFN  +  EEK+GG P  + Q+Q FR V+DDCG QD+ 
Subjt:  EVEVTIRSFSQFHIDVSIKWECK-SWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDME

Query:  FSGDLFTWTN
        F+G  FTW N
Subjt:  FSGDLFTWTN

A0A2N9IXK4 RNase H domain-containing protein4.2e-2039.29Show/hide
Query:  KTKGWKRKARKAGLERSTNATNEELKKRVGDGLASGSLKWPRTNQGDDSNAFEPTVEDEVEVTIRSFSQFHIDVSI-KWECKSWRFTGLYGNPNTSLRKH
        + K   R   +  L  ST + NE +   +        L  PR  QG     F    + E  V+I+SFS  HID  I + E  SWRFTG YG P T  R  
Subjt:  KTKGWKRKARKAGLERSTNATNEELKKRVGDGLASGSLKWPRTNQGDDSNAFEPTVEDEVEVTIRSFSQFHIDVSI-KWECKSWRFTGLYGNPNTSLRKH

Query:  TWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDMEFSGDLFTWTN
        +W LLR L++Q        GDFN  L +EEK+GG      Q+Q FRD +D CG +D+ F+G  FTW N
Subjt:  TWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDMEFSGDLFTWTN

A0A5C7H9Y2 CCHC-type domain-containing protein7.2e-2039.77Show/hide
Query:  KGWKRKAR-KAGLERSTNATNEELKKRVG--------DGLASGSLKWPRTNQGDDSNAFEPTVEDEVEVTIRSFSQFHIDVSIK-WECKSWRFTGLYGNP
        K WKR AR K G   S N  N+ L K+ G        D          R  QG          ++++EV+IRSF++ HID  IK  +   WRFTG YG P
Subjt:  KGWKRKAR-KAGLERSTNATNEELKKRVG--------DGLASGSLKWPRTNQGDDSNAFEPTVEDEVEVTIRSFSQFHIDVSIK-WECKSWRFTGLYGNP

Query:  NTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDMEFSGDLFTWTNR
          S R H+W LLRRL    +   +V GDFN  L  +EK+GG     T +  FR+ +DDC L DM + G+ +TW+NR
Subjt:  NTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDMEFSGDLFTWTNR

A0A803PHH5 Uncharacterized protein5.5e-2045.95Show/hide
Query:  DEVEVTIRSFSQFHIDVSI-KWECKSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDM
        +++  +I SFS FHID  I K E + WRFTG YG+P+ S R  +W LL R+        M+GGDFN  L  +EK+GGNP     +  FR  +DDC L+++
Subjt:  DEVEVTIRSFSQFHIDVSI-KWECKSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACMVGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDM

Query:  EFSGDLFTWTN
        EF G++FTW N
Subjt:  EFSGDLFTWTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGGCCGAGCAGGGGTCGGGCCAAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTCGCCTCTTGGGTCCATCTCCCAGTCCGATTTCTCCCC
GGTTGTCCTCGTCAGCTCATTGTACATCGAGATAAAGTTGCAATCTAAAACTTACCCAATGGGAAATATTAGTGGAATGGGTCCAAACCAGACTGAAGATGCTCATGCTA
CATTGGAGACATGGACTAAACTACTTGAAAAGCCCATCTTTGAGATGGGTCAAGCTTCTGTTACTGCTTCCTATGTTTCCAAAATTGGTCCAAAAACGAAAGGATGGAAA
AGGAAGGCTCGTAAAGCTGGTCTGGAGCGAAGCACCAATGCAACAAATGAAGAACTGAAGAAACGTGTGGGAGATGGACTAGCAAGCGGGTCTCTGAAGTGGCCACGAAC
TAATCAGGGGGACGACTCCAATGCTTTTGAACCAACGGTGGAGGATGAAGTCGAGGTCACCATCCGCTCTTTTTCTCAATTCCATATAGATGTTTCGATCAAATGGGAAT
GTAAAAGTTGGCGCTTCACTGGCTTATATGGTAACCCGAATACTAGTCTAAGGAAACATACATGGGATTTACTTCGGCGCCTTTACAACCAAGATGACTCTGCCTGCATG
GTTGGTGGAGATTTTAATGCCACCTTGTTGCATGAGGAGAAAGAGGGTGGGAATCCAGTTCAAGAAACCCAAATTCAGCTGTTTCGTGACGTTATGGATGATTGTGGTCT
TCAAGATATGGAGTTTTCAGGCGATTTGTTTACGTGGACTAATCGACATGATAGGGAGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGGCCGAGCAGGGGTCGGGCCAAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTCGCCTCTTGGGTCCATCTCCCAGTCCGATTTCTCCCC
GGTTGTCCTCGTCAGCTCATTGTACATCGAGATAAAGTTGCAATCTAAAACTTACCCAATGGGAAATATTAGTGGAATGGGTCCAAACCAGACTGAAGATGCTCATGCTA
CATTGGAGACATGGACTAAACTACTTGAAAAGCCCATCTTTGAGATGGGTCAAGCTTCTGTTACTGCTTCCTATGTTTCCAAAATTGGTCCAAAAACGAAAGGATGGAAA
AGGAAGGCTCGTAAAGCTGGTCTGGAGCGAAGCACCAATGCAACAAATGAAGAACTGAAGAAACGTGTGGGAGATGGACTAGCAAGCGGGTCTCTGAAGTGGCCACGAAC
TAATCAGGGGGACGACTCCAATGCTTTTGAACCAACGGTGGAGGATGAAGTCGAGGTCACCATCCGCTCTTTTTCTCAATTCCATATAGATGTTTCGATCAAATGGGAAT
GTAAAAGTTGGCGCTTCACTGGCTTATATGGTAACCCGAATACTAGTCTAAGGAAACATACATGGGATTTACTTCGGCGCCTTTACAACCAAGATGACTCTGCCTGCATG
GTTGGTGGAGATTTTAATGCCACCTTGTTGCATGAGGAGAAAGAGGGTGGGAATCCAGTTCAAGAAACCCAAATTCAGCTGTTTCGTGACGTTATGGATGATTGTGGTCT
TCAAGATATGGAGTTTTCAGGCGATTTGTTTACGTGGACTAATCGACATGATAGGGAGAGTTAG
Protein sequenceShow/hide protein sequence
MAEAEQGSGQKPDPFGLGPSHLPVSPLGSISQSDFSPVVLVSSLYIEIKLQSKTYPMGNISGMGPNQTEDAHATLETWTKLLEKPIFEMGQASVTASYVSKIGPKTKGWK
RKARKAGLERSTNATNEELKKRVGDGLASGSLKWPRTNQGDDSNAFEPTVEDEVEVTIRSFSQFHIDVSIKWECKSWRFTGLYGNPNTSLRKHTWDLLRRLYNQDDSACM
VGGDFNATLLHEEKEGGNPVQETQIQLFRDVMDDCGLQDMEFSGDLFTWTNRHDRES