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Lag0006135 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006135
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr6:38029725..38030045
RNA-Seq ExpressionLag0006135
SyntenyLag0006135
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU48804.1 hypothetical protein TSUD_406370 [Trifolium subterraneum]9.1e-1042.86Show/hide
Query:  AYVASLIDEG-GNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFL---TQNLSTAGEPSSTNHKALWKDLWKSKAIPKEK
        A V+ LID    +W  N I +IF P + + ILNIPLS R  ND++ W  +  GN +V+SA+ +   T NL+   E SS+N++ +WK +WK KA P  K
Subjt:  AYVASLIDEG-GNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFL---TQNLSTAGEPSSTNHKALWKDLWKSKAIPKEK

KAA0031740.1 retrotransposon protein, putative, unclassified [Cucumis melo var. makuwa]5.1e-1345.79Show/hide
Query:  MFVPEKVKKAYVASLIDEGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEPSSTNHK---ALWKDLWKSK
        + V E +KK  V +LID  GNW E  I   FI     SI+NIPL    S D+IFWG DPK N  VKS Y +  +   + E SS+N K      K +W SK
Subjt:  MFVPEKVKKAYVASLIDEGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEPSSTNHK---ALWKDLWKSK

Query:  AIPKEKI
        A+PK KI
Subjt:  AIPKEKI

KAF7838995.1 uncharacterized protein G2W53_007477 [Senna tora]1.2e-0939.22Show/hide
Query:  VPEKVKKAYVASLIDEGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEPSSTNHKALWKDLWKSKAIPKE
        V +  ++A V SL+DE G+W +  IR IF P+  E+IL IPLS R   D   W L+  G  +VKS+Y      S +   S T + +LWK +WK+   PK 
Subjt:  VPEKVKKAYVASLIDEGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEPSSTNHKALWKDLWKSKAIPKE

Query:  KI
        ++
Subjt:  KI

XP_023915006.1 uncharacterized protein LOC112026546 [Quercus suber]9.1e-1043Show/hide
Query:  VASLIDEGGN-WKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNL---STAGEPSSTNH-KALWKDLWKSKAIPKEKICA
        V+SLID     WK + +R IF+P + +SIL IPLS     D + W  + KG+ TVKSAY++  ++   +  GE SS+N    LWK +W  K  PK KI A
Subjt:  VASLIDEGGN-WKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNL---STAGEPSSTNH-KALWKDLWKSKAIPKEKICA

XP_030926233.1 uncharacterized protein LOC115952977 [Quercus lobata]1.2e-0935.92Show/hide
Query:  VPEKVKKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEPSSTN---HKALWKDLWKSKA
        +P    +A V+SLID   G WK+ +I+++F+P + ++I++IPLS R   D + W   P GN + +SAY L  + + A  PSS+N    ++ W+  W  + 
Subjt:  VPEKVKKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEPSSTN---HKALWKDLWKSKA

Query:  IPK
        I K
Subjt:  IPK

TrEMBL top hitse value%identityAlignment
A0A2N9GTH6 Uncharacterized protein1.2e-1243.14Show/hide
Query:  KKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEP----SSTNHKALWKDLWKSKAIPKE
        + A V +LID E  +WK +E+ +IFIP   E+IL IPLS+R  ND + W +  KGN TVKSAY L ++  +  EP    +S  +  LW  +WK++  PK 
Subjt:  KKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEP----SSTNHKALWKDLWKSKAIPKE

Query:  KI
        K+
Subjt:  KI

A0A2N9H205 Uncharacterized protein2.6e-1042.11Show/hide
Query:  KKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEP----SSTNHKALWKDLWKSK
        + A V +LID E  +WK +E+ +IFIP   E+IL IPLS+R  ND + W +  K N TVKSAY L ++  +  EP    +S  +  LW  +WK++
Subjt:  KKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEP----SSTNHKALWKDLWKSK

A0A2N9HE09 Uncharacterized protein8.0e-1242.16Show/hide
Query:  KKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEP----SSTNHKALWKDLWKSKAIPKE
        + A V +LID E  +WK +E+ +IFIP   E+IL IPLS+R  ND + W +  K N TVKSAY L ++  +  EP    +S  +  LW  +WK++  PK 
Subjt:  KKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEP----SSTNHKALWKDLWKSKAIPKE

Query:  KI
        K+
Subjt:  KI

A0A2N9IE72 Uncharacterized protein1.2e-1243.14Show/hide
Query:  KKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEP----SSTNHKALWKDLWKSKAIPKE
        + A V +LID E  +WK +E+ +IFIP   E+IL IPLS+R  ND + W +  KGN TVKSAY L ++  +  EP    +S  +  LW  +WK++  PK 
Subjt:  KKAYVASLID-EGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEP----SSTNHKALWKDLWKSKAIPKE

Query:  KI
        K+
Subjt:  KI

A0A5A7SLW3 Retrotransposon protein, putative, unclassified2.5e-1345.79Show/hide
Query:  MFVPEKVKKAYVASLIDEGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEPSSTNHK---ALWKDLWKSK
        + V E +KK  V +LID  GNW E  I   FI     SI+NIPL    S D+IFWG DPK N  VKS Y +  +   + E SS+N K      K +W SK
Subjt:  MFVPEKVKKAYVASLIDEGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEPSSTNHK---ALWKDLWKSK

Query:  AIPKEKI
        A+PK KI
Subjt:  AIPKEKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)7.2e-0537.31Show/hide
Query:  YVASLIDEGGN-WKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLS
        YV  LID+  N WK + ++ +  P     IL I  SR   +D   W     GN TVKS Y++ ++LS
Subjt:  YVASLIDEGGN-WKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTGCCAGAGAAGGTTAAGAAAGCCTACGTGGCTAGCTTAATTGACGAAGGAGGCAACTGGAAGGAGAATGAGATTAGGAAAATCTTCATCCCTTCTAAAACTGA
GAGTATCTTAAATATTCCTCTGAGTAGGAGGGACTCAAATGATGAAATCTTTTGGGGGTTGGATCCGAAAGGAAACTCTACCGTCAAAAGCGCCTATTTCCTAACTCAAA
ACCTATCAACAGCAGGGGAACCCTCCTCCACGAACCATAAAGCTTTGTGGAAAGACCTTTGGAAATCAAAAGCCATTCCAAAAGAGAAGATTTGCGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTGCCAGAGAAGGTTAAGAAAGCCTACGTGGCTAGCTTAATTGACGAAGGAGGCAACTGGAAGGAGAATGAGATTAGGAAAATCTTCATCCCTTCTAAAACTGA
GAGTATCTTAAATATTCCTCTGAGTAGGAGGGACTCAAATGATGAAATCTTTTGGGGGTTGGATCCGAAAGGAAACTCTACCGTCAAAAGCGCCTATTTCCTAACTCAAA
ACCTATCAACAGCAGGGGAACCCTCCTCCACGAACCATAAAGCTTTGTGGAAAGACCTTTGGAAATCAAAAGCCATTCCAAAAGAGAAGATTTGCGCCTAG
Protein sequenceShow/hide protein sequence
MFVPEKVKKAYVASLIDEGGNWKENEIRKIFIPSKTESILNIPLSRRDSNDEIFWGLDPKGNSTVKSAYFLTQNLSTAGEPSSTNHKALWKDLWKSKAIPKEKICA