; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006136 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006136
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:38030236..38030812
RNA-Seq ExpressionLag0006136
SyntenyLag0006136
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4274760.1 unnamed protein product [Prunus armeniaca]6.5e-0431.93Show/hide
Query:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE
        +A+WS ++  G +GW+ RD  G  + AG +      S + +EL AI    R  L E  N HL  II+ES+S    ++LN  + V S    +  D+     
Subjt:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE

Query:  LIGSVEFSFSRRESNIIVH
         +  V F F+ R  N   H
Subjt:  LIGSVEFSFSRRESNIIVH

CAB4274761.1 unnamed protein product [Prunus armeniaca]6.5e-0431.93Show/hide
Query:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE
        +A+WS ++  G +GW+ RD  G  + AG +      S + +EL AI    R  L E  N HL  II+ES+S    ++LN  + V S    +  D+     
Subjt:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE

Query:  LIGSVEFSFSRRESNIIVH
         +  V F F+ R  N   H
Subjt:  LIGSVEFSFSRRESNIIVH

CAB4291403.1 unnamed protein product [Prunus armeniaca]5.0e-0432.33Show/hide
Query:  LIKKNSDKLYGKEENASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFS
        L+K NSD        A+WS ++  G +GW+ RD  G  + AG +      S L +EL AI    R  L E  N HL  II+ES+S    ++LN  + V S
Subjt:  LIKKNSDKLYGKEENASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFS

Query:  GSRSVADDVEYAAELIGSVEFSFSRRESNIIVH
            +  D+      +  V F F+    N   H
Subjt:  GSRSVADDVEYAAELIGSVEFSFSRRESNIIVH

CAB4303756.1 unnamed protein product [Prunus armeniaca]6.5e-0431.93Show/hide
Query:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE
        +A+WS ++  G +GW+ RD  G  + AG +      S + +EL AI    R  L E  N HL  II+ES+S    ++LN  + V S    +  D+     
Subjt:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE

Query:  LIGSVEFSFSRRESNIIVH
         +  V F F+ R  N   H
Subjt:  LIGSVEFSFSRRESNIIVH

XP_013694754.1 uncharacterized protein LOC106398790 [Brassica napus]5.0e-0426.27Show/hide
Query:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGNHLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAEL
        +A+W +E   G +GW+ RD  G  ++AG KR+    S+   E++A+  ++R+L    G     +  ES+S  +  +LN++ E++   + +   +  +   
Subjt:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGNHLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAEL

Query:  IGSVEFSFSRRESNIIVH
        +  VE ++  R  N I H
Subjt:  IGSVEFSFSRRESNIIVH

TrEMBL top hitse value%identityAlignment
A0A6J5UE59 Reverse transcriptase domain-containing protein3.2e-0431.93Show/hide
Query:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE
        +A+WS ++  G +GW+ RD  G  + AG +      S + +EL AI    R  L E  N HL  II+ES+S    ++LN  + V S    +  D+     
Subjt:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE

Query:  LIGSVEFSFSRRESNIIVH
         +  V F F+ R  N   H
Subjt:  LIGSVEFSFSRRESNIIVH

A0A6J5UF50 Uncharacterized protein3.2e-0431.93Show/hide
Query:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE
        +A+WS ++  G +GW+ RD  G  + AG +      S + +EL AI    R  L E  N HL  II+ES+S    ++LN  + V S    +  D+     
Subjt:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE

Query:  LIGSVEFSFSRRESNIIVH
         +  V F F+ R  N   H
Subjt:  LIGSVEFSFSRRESNIIVH

A0A6J5VSP2 Uncharacterized protein2.4e-0432.33Show/hide
Query:  LIKKNSDKLYGKEENASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFS
        L+K NSD        A+WS ++  G +GW+ RD  G  + AG +      S L +EL AI    R  L E  N HL  II+ES+S    ++LN  + V S
Subjt:  LIKKNSDKLYGKEENASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFS

Query:  GSRSVADDVEYAAELIGSVEFSFSRRESNIIVH
            +  D+      +  V F F+    N   H
Subjt:  GSRSVADDVEYAAELIGSVEFSFSRRESNIIVH

A0A6J5WPU6 Reverse transcriptase domain-containing protein3.2e-0431.93Show/hide
Query:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE
        +A+WS ++  G +GW+ RD  G  + AG +      S + +EL AI    R  L E  N HL  II+ES+S    ++LN  + V S    +  D+     
Subjt:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE

Query:  LIGSVEFSFSRRESNIIVH
         +  V F F+ R  N   H
Subjt:  LIGSVEFSFSRRESNIIVH

A0A6J5YDN0 Uncharacterized protein7.1e-0431.93Show/hide
Query:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE
        +A+WS ++  G +GW+ RD     + AG +      S L +EL AI    R  L E  N HL  II+ES+S    ++LN  + V S    +  D+     
Subjt:  NASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGN-HLPRIIIESNSTNVTVILNHDSEVFSGSRSVADDVEYAAE

Query:  LIGSVEFSFSRRESNIIVH
         +  V F F+ R  N   H
Subjt:  LIGSVEFSFSRRESNIIVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTAGCTGAAAATCTCGATGAAGAAGATCGTGGGAAAGCTACAAGCATCATTTGGAGTATTTGGAGTCACAGAAATTTGATAAAGAAAAATTCGGATAAGCTATA
TGGGAAGGAAGAAAATGCATCATGGTCTGAAGAAAAAAGAACTGGGAGAATCGGATGGATTGCTCGTGACTTTTTGGGATCTTTTATCTTTGCCGGTTTCAAGAGGATGA
AGAGGAAATGGTCGATTCTCAGTCTGGAATTGAAAGCAATTGAAGAAAGTCTAAGGAGCTTACTTGAAGAAATTGGAAATCACCTCCCAAGGATCATCATCGAATCTAAT
TCAACAAACGTGACCGTCATCCTCAACCATGATTCCGAAGTCTTCTCGGGGAGCAGGTCGGTGGCGGACGATGTGGAGTATGCGGCGGAGCTGATCGGAAGCGTCGAGTT
CAGCTTCAGCCGGCGGGAATCCAACATCATTGTGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTAGCTGAAAATCTCGATGAAGAAGATCGTGGGAAAGCTACAAGCATCATTTGGAGTATTTGGAGTCACAGAAATTTGATAAAGAAAAATTCGGATAAGCTATA
TGGGAAGGAAGAAAATGCATCATGGTCTGAAGAAAAAAGAACTGGGAGAATCGGATGGATTGCTCGTGACTTTTTGGGATCTTTTATCTTTGCCGGTTTCAAGAGGATGA
AGAGGAAATGGTCGATTCTCAGTCTGGAATTGAAAGCAATTGAAGAAAGTCTAAGGAGCTTACTTGAAGAAATTGGAAATCACCTCCCAAGGATCATCATCGAATCTAAT
TCAACAAACGTGACCGTCATCCTCAACCATGATTCCGAAGTCTTCTCGGGGAGCAGGTCGGTGGCGGACGATGTGGAGTATGCGGCGGAGCTGATCGGAAGCGTCGAGTT
CAGCTTCAGCCGGCGGGAATCCAACATCATTGTGCATTAG
Protein sequenceShow/hide protein sequence
MSLAENLDEEDRGKATSIIWSIWSHRNLIKKNSDKLYGKEENASWSEEKRTGRIGWIARDFLGSFIFAGFKRMKRKWSILSLELKAIEESLRSLLEEIGNHLPRIIIESN
STNVTVILNHDSEVFSGSRSVADDVEYAAELIGSVEFSFSRRESNIIVH