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Lag0006138 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006138
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:38056217..38056843
RNA-Seq ExpressionLag0006138
SyntenyLag0006138
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]8.5e-2041.22Show/hide
Query:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTR-EDFSVQLLGKNTFLFKFGSQEDKNWVIKN
        M   +LL EWK+F L  EE   A+ ID   +E   K  L+  LI KLL KR +I+ T +KN L  AWK   + FSV ++G N FLF F    D+N +++ 
Subjt:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTR-EDFSVQLLGKNTFLFKFGSQEDKNWVIKN

Query:  GPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA
        GPW FD+ L+I++ P +  +  ++DF+  S W+   +L L   NKTMA
Subjt:  GPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]6.7e-2541.5Show/hide
Query:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIKNG
        M+ E+LL +W+ F L  EE   A+ +D + V+M  +G L + L+GKLL KR  I+   +   L  AWK     +V+ +GKN FLF F  + D N V+K G
Subjt:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIKNG

Query:  PWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA
        PW FDK L++L+ P +++   EL+F + +FW+ L +LP+ + NKTMA
Subjt:  PWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.9e-2040.97Show/hide
Query:  DLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTRED-FSVQLLGKNTFLFKFGSQEDKNWVIKNGPWL
        DLL EWK+F L  EE+  A+ +D          +L+  L+GKL +KR  I    +KN +  AWK   + F VQ LG N FLF F    D+N + K+GPW 
Subjt:  DLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTRED-FSVQLLGKNTFLFKFGSQEDKNWVIKNGPWL

Query:  FDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA
        FD+ L+++  P A     ELDF K   W+R  +LPLG   + MA
Subjt:  FDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA

XP_024033132.1 uncharacterized protein LOC112095437 [Citrus clementina]1.8e-1737.09Show/hide
Query:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQ--LDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIK
        ME E+L+ + ++  L  EE  K +       +M  KG   +  CL+GK+L+ R  +    +K AL  AW+T  DF V+ LG N F+FKF S+ DK  V  
Subjt:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQ--LDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIK

Query:  NGPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMARE
         GPW FD+ L++L+ P      K+  F   SFW+R+ N+PL   + ++ RE
Subjt:  NGPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMARE

XP_024033488.1 uncharacterized protein LOC112095611 [Citrus clementina]4.7e-1835.1Show/hide
Query:  MEIEDLLNEWKSFNLRDEEKGKAL--SIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIK
        M+ E+L+ + K+ +L  E +GK    S   E+ E I+ G    CL+GK+L+ R  +     K AL   WKT ++  ++ LG N F+F+FG + DK  V+ 
Subjt:  MEIEDLLNEWKSFNLRDEEKGKAL--SIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIK

Query:  NGPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMARE
         GPW FDK L+++  P+      + +F   SFW++++N+P+   N  M RE
Subjt:  NGPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMARE

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)4.3e-1733.77Show/hide
Query:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEV--EMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIK
        M+ E+L+   ++  L DEE G+    +  ++  E I+ G    CL+GK+L  R  +++  +K A+   W+T  +  ++ LG+N F+FKFGS+ DK  ++ 
Subjt:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEV--EMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIK

Query:  NGPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMARE
         GPW FD+ L+ L  P+     K+ DF   SFW+++ ++P+   +K MA E
Subjt:  NGPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMARE

A0A6J1BSZ1 uncharacterized protein LOC1110054814.1e-2041.22Show/hide
Query:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTR-EDFSVQLLGKNTFLFKFGSQEDKNWVIKN
        M   +LL EWK+F L  EE   A+ ID   +E   K  L+  LI KLL KR +I+ T +KN L  AWK   + FSV ++G N FLF F    D+N +++ 
Subjt:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTR-EDFSVQLLGKNTFLFKFGSQEDKNWVIKN

Query:  GPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA
        GPW FD+ L+I++ P +  +  ++DF+  S W+   +L L   NKTMA
Subjt:  GPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA

A0A6J1DU55 uncharacterized protein LOC1110231353.3e-2541.5Show/hide
Query:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIKNG
        M+ E+LL +W+ F L  EE   A+ +D + V+M  +G L + L+GKLL KR  I+   +   L  AWK     +V+ +GKN FLF F  + D N V+K G
Subjt:  MEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIKNG

Query:  PWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA
        PW FDK L++L+ P +++   EL+F + +FW+ L +LP+ + NKTMA
Subjt:  PWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA

A0A6J1DX30 uncharacterized protein LOC1110248741.4e-2040.97Show/hide
Query:  DLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTRED-FSVQLLGKNTFLFKFGSQEDKNWVIKNGPWL
        DLL EWK+F L  EE+  A+ +D          +L+  L+GKL +KR  I    +KN +  AWK   + F VQ LG N FLF F    D+N + K+GPW 
Subjt:  DLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTRED-FSVQLLGKNTFLFKFGSQEDKNWVIKNGPWL

Query:  FDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA
        FD+ L+++  P A     ELDF K   W+R  +LPLG   + MA
Subjt:  FDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMA

A0A803LK12 Uncharacterized protein3.9e-1833.11Show/hide
Query:  EDLLNEWKSFNLRDEEKG--KALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIKNGP
        E+L+ +W++F L DEE     A SI+    +  +K  L+  L+GK+L  +       +K  L G W+  +D +V+++  N F+F+F ++EDK  V+   P
Subjt:  EDLLNEWKSFNLRDEEKG--KALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGAWKTREDFSVQLLGKNTFLFKFGSQEDKNWVIKNGP

Query:  WLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMARE
        W FDK +L+L+    +++  E+ F+   FW+R++++  G RN+  ARE
Subjt:  WLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMARE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAAGACCTTGATTTGGGTTCTTGGAGTTTTCCCTTGATTTCGTGGGAGCATATTGTCAGCTTGTCTGCTGGAGATCTTTCAACCCTTGTTAAGCGACCTAAAAG
AACCCAAAGACAGTCAGCTTTAATGGAGATTGAAGACCTTCTAAATGAATGGAAAAGTTTTAATCTTAGAGATGAAGAGAAGGGGAAGGCCCTATCCATTGATCCTGAAG
AAGTCGAAATGATCATAAAAGGCCAGTTGGATCATTGTTTGATTGGAAAGCTCTTAGTAAAAAGGAACAACATAGCGGTGACGCCCATCAAGAACGCTCTCTTTGGTGCC
TGGAAGACAAGAGAAGATTTCAGTGTTCAACTTTTAGGGAAGAATACGTTTCTTTTCAAATTTGGAAGCCAAGAGGATAAAAACTGGGTAATAAAAAACGGACCTTGGTT
GTTCGACAAATATCTACTGATTCTTGAAGTTCCATCTGCAAATCAAAGAACAAAGGAATTGGATTTCAAGAAGGCATCCTTCTGGCTAAGACTTATTAATCTTCCGCTAG
GTTACAGGAATAAAACAATGGCAAGAGAAACTTGCTTTCAGGTGTTGGGAATGCGACCAAAGTCCCCCATTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAAGACCTTGATTTGGGTTCTTGGAGTTTTCCCTTGATTTCGTGGGAGCATATTGTCAGCTTGTCTGCTGGAGATCTTTCAACCCTTGTTAAGCGACCTAAAAG
AACCCAAAGACAGTCAGCTTTAATGGAGATTGAAGACCTTCTAAATGAATGGAAAAGTTTTAATCTTAGAGATGAAGAGAAGGGGAAGGCCCTATCCATTGATCCTGAAG
AAGTCGAAATGATCATAAAAGGCCAGTTGGATCATTGTTTGATTGGAAAGCTCTTAGTAAAAAGGAACAACATAGCGGTGACGCCCATCAAGAACGCTCTCTTTGGTGCC
TGGAAGACAAGAGAAGATTTCAGTGTTCAACTTTTAGGGAAGAATACGTTTCTTTTCAAATTTGGAAGCCAAGAGGATAAAAACTGGGTAATAAAAAACGGACCTTGGTT
GTTCGACAAATATCTACTGATTCTTGAAGTTCCATCTGCAAATCAAAGAACAAAGGAATTGGATTTCAAGAAGGCATCCTTCTGGCTAAGACTTATTAATCTTCCGCTAG
GTTACAGGAATAAAACAATGGCAAGAGAAACTTGCTTTCAGGTGTTGGGAATGCGACCAAAGTCCCCCATTGATTAG
Protein sequenceShow/hide protein sequence
MSEDLDLGSWSFPLISWEHIVSLSAGDLSTLVKRPKRTQRQSALMEIEDLLNEWKSFNLRDEEKGKALSIDPEEVEMIIKGQLDHCLIGKLLVKRNNIAVTPIKNALFGA
WKTREDFSVQLLGKNTFLFKFGSQEDKNWVIKNGPWLFDKYLLILEVPSANQRTKELDFKKASFWLRLINLPLGYRNKTMARETCFQVLGMRPKSPID