; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006145 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006145
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:38201189..38202124
RNA-Seq ExpressionLag0006145
SyntenyLag0006145
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.6e-4035.74Show/hide
Query:  MDPSSLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDA--------------------------VLQGP
        M  S+LL +W    LTSEE+ ++V  D  A+E TG  LE+ L+ KL+  + I   V++   + AWK+D                           +  GP
Subjt:  MDPSSLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDA--------------------------VLQGP

Query:  WLFEKFLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLW
        W F++ L+++  P+   + LD  F +V+ WVH F+L +   N++MA RL NAIG+FE+V++      WG  LR+++R D+  PLHRGI++  DGP+ G W
Subjt:  WLFEKFLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLW

Query:  VPIRYERIPVICSYCGLISHSPRACTLFLQSENKDHLPHRYGEWLRFTG
        +PI+YER+P    +CG + H  + C+         +L  +YG WLRF G
Subjt:  VPIRYERIPVICSYCGLISHSPRACTLFLQSENKDHLPHRYGEWLRFTG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.4e-4439.2Show/hide
Query:  MDPSSLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVL-------------------------QGPW
        MD  +LL DW +  LTSEE+++++  D +AV+     L   L+ KL+  + I A+V+ R    AWK++  L                          GPW
Subjt:  MDPSSLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVL-------------------------QGPW

Query:  LFEKFLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVD-NRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLW
         F+K L+VL  P       +  F+ VAFW+H+F+LP+ W N++MA RL NAIG F +VD N  GF  WG +LRI++ +D+  PL RGI+I  DGP+ G W
Subjt:  LFEKFLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVD-NRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLW

Query:  VPIRYERIPVICSYCGLISHSPRAC-TLFLQSENKDHLPHRYGEWLRFTG
        +PI+YER+P  C +CG+I HS   C   +L +++       YG WLRF G
Subjt:  VPIRYERIPVICSYCGLISHSPRAC-TLFLQSENKDHLPHRYGEWLRFTG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.0e-3534.43Show/hide
Query:  LLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKID--------------------------AVLQGPWLFEK
        LL +W    LTSEEE+ ++  D  A   TG  LE  L+ KL   +PI   VM+   R+AWK++                              GPW F++
Subjt:  LLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKID--------------------------AVLQGPWLFEK

Query:  FLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRY
         L+++  P+  +   +  F+ +  WV  F+LP+    + MA RL NA+G FEE D  +    WG NLR+++ LD++ PL RGI++  DGP+ G W+PI+Y
Subjt:  FLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRY

Query:  ERIPVICSYCGLISHSPRACTLFLQSENKDHLPHRYGEWLRFTG
        ER+P  C +CGL S   +               H+YG WLR+ G
Subjt:  ERIPVICSYCGLISHSPRACTLFLQSENKDHLPHRYGEWLRFTG

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]4.4e-2731.4Show/hide
Query:  SLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVLQ-------------------------GPWLFEK
        SLL+    LSLTSEE+ V  +         G S ++CL+ KL+  +P   E M+    S W+    +Q                         GPW F+K
Subjt:  SLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVLQ-------------------------GPWLFEK

Query:  FLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRY
         LL+L    P ++  D   + V FWVH+  LP+   N+ + + + NA+G F ++D  +G + WG  + I++ LD+  PL RG+++     +  +WV  +Y
Subjt:  FLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRY

Query:  ERIPVICSYCGLISHSPRACTLFLQSENKDHLPH-RYGEWLR
        ER+P+ C +CG + HS R C   L S +   +   +YG WLR
Subjt:  ERIPVICSYCGLISHSPRACTLFLQSENKDHLPH-RYGEWLR

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]3.1e-2832.23Show/hide
Query:  SLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVLQ-------------------------GPWLFEK
        SLL+    LSLTSEE+ V  +         G S ++CL+ KL+  +P   E M+    S W+    +Q                         GPW F+K
Subjt:  SLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVLQ-------------------------GPWLFEK

Query:  FLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRY
         LL+L    P ++  D   + V FWVH+  LP+   N+ + E + NA+G F ++D  +G + WG  +RI++ LD+  PL RG+++        +WV  +Y
Subjt:  FLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRY

Query:  ERIPVICSYCGLISHSPRACTLFLQSENKDHLPH-RYGEWLR
        ER+P+ C +CG + HS R C   L S +   +   +YG WLR
Subjt:  ERIPVICSYCGLISHSPRACTLFLQSENKDHLPH-RYGEWLR

TrEMBL top hitse value%identityAlignment
A0A2N9H0Z5 CCHC-type domain-containing protein4.5e-2533.18Show/hide
Query:  LLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVLQG-PWLFEKFLLVLVFPIPGLRSLDHLFSSVAFW
        L+ +W + SLT E+E      + +A+  + +    CLL KL+  +P         F+  ++   VL G PWLF  +LL L        +    FS   FW
Subjt:  LLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVLQG-PWLFEKFLLVLVFPIPGLRSLDHLFSSVAFW

Query:  VHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRYERIPVICSYCGLISHSPRACTLFLQ
        V +  +P+++  +   +RL NA+G   +VD   G + WG  LRI++ LD   P+ RG R+        LWV  +YER+P +C +CGL+ HS R C   L+
Subjt:  VHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRYERIPVICSYCGLISHSPRACTLFLQ

Query:  SENKD-HLPHRYGEWLR
        S  +   +  +YG WLR
Subjt:  SENKD-HLPHRYGEWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054817.6e-4135.74Show/hide
Query:  MDPSSLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDA--------------------------VLQGP
        M  S+LL +W    LTSEE+ ++V  D  A+E TG  LE+ L+ KL+  + I   V++   + AWK+D                           +  GP
Subjt:  MDPSSLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDA--------------------------VLQGP

Query:  WLFEKFLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLW
        W F++ L+++  P+   + LD  F +V+ WVH F+L +   N++MA RL NAIG+FE+V++      WG  LR+++R D+  PLHRGI++  DGP+ G W
Subjt:  WLFEKFLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLW

Query:  VPIRYERIPVICSYCGLISHSPRACTLFLQSENKDHLPHRYGEWLRFTG
        +PI+YER+P    +CG + H  + C+         +L  +YG WLRF G
Subjt:  VPIRYERIPVICSYCGLISHSPRACTLFLQSENKDHLPHRYGEWLRFTG

A0A6J1DU55 uncharacterized protein LOC1110231356.6e-4539.2Show/hide
Query:  MDPSSLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVL-------------------------QGPW
        MD  +LL DW +  LTSEE+++++  D +AV+     L   L+ KL+  + I A+V+ R    AWK++  L                          GPW
Subjt:  MDPSSLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVL-------------------------QGPW

Query:  LFEKFLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVD-NRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLW
         F+K L+VL  P       +  F+ VAFW+H+F+LP+ W N++MA RL NAIG F +VD N  GF  WG +LRI++ +D+  PL RGI+I  DGP+ G W
Subjt:  LFEKFLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVD-NRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLW

Query:  VPIRYERIPVICSYCGLISHSPRAC-TLFLQSENKDHLPHRYGEWLRFTG
        +PI+YER+P  C +CG+I HS   C   +L +++       YG WLRF G
Subjt:  VPIRYERIPVICSYCGLISHSPRAC-TLFLQSENKDHLPHRYGEWLRFTG

A0A6J1DX30 uncharacterized protein LOC1110248749.6e-3634.43Show/hide
Query:  LLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKID--------------------------AVLQGPWLFEK
        LL +W    LTSEEE+ ++  D  A   TG  LE  L+ KL   +PI   VM+   R+AWK++                              GPW F++
Subjt:  LLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKID--------------------------AVLQGPWLFEK

Query:  FLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRY
         L+++  P+  +   +  F+ +  WV  F+LP+    + MA RL NA+G FEE D  +    WG NLR+++ LD++ PL RGI++  DGP+ G W+PI+Y
Subjt:  FLLVLVFPIPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRY

Query:  ERIPVICSYCGLISHSPRACTLFLQSENKDHLPHRYGEWLRFTG
        ER+P  C +CGL S   +               H+YG WLR+ G
Subjt:  ERIPVICSYCGLISHSPRACTLFLQSENKDHLPHRYGEWLRFTG

A0A6P6S3G2 uncharacterized protein LOC1136872931.1e-2628.73Show/hide
Query:  LSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAW------------------KIDAVLQ-------GPWLFEKFLLVLVFP
        L L  +EE+V ++   +A +      E+C+L KL   +    E +    +  W                  K + +L        GPW F+  LLV+   
Subjt:  LSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAW------------------KIDAVLQ-------GPWLFEKFLLVLVFP

Query:  IPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRYERIPVICS
        I  ++S +    + +FWV ++ LP+ W N   AE L N +G++E  + R     WG  LRI++++ L  PL R + +F +G +    V  +YER+P++C 
Subjt:  IPGLRSLDHLFSSVAFWVHIFELPIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRYERIPVICS

Query:  YCGLISHSPRACTLFLQSENKDHLPHRYGEWLR------FTGKGMMSPPVLIREENLALSSDILQGQRLMIAVSP
        YCG I H  R C L L +   D    +YG WLR      F+G+    P V I +    +     +G+R   + SP
Subjt:  YCGLISHSPRACTLFLQSENKDHLPHRYGEWLR------FTGKGMMSPPVLIREENLALSSDILQGQRLMIAVSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCTTCATCTTTACTTAACGATTGGTCCCAATTGAGTTTGACTTCGGAGGAGGAGGATGTTTCGGTGGTTGCTGATAGGGAGGCTGTGGAGAGAACTGGGATTTC
GCTAGAAGTGTGTTTACTCGAAAAATTAGTTTGTCCTCAGCCTATTGGAGCAGAGGTAATGAGGAGGAATTTTCGATCGGCGTGGAAGATTGACGCTGTTTTGCAGGGGC
CATGGCTATTTGAAAAATTTCTCCTCGTTCTGGTTTTCCCAATCCCTGGTTTGAGGTCATTGGATCACCTTTTTTCTTCCGTTGCTTTTTGGGTGCATATTTTTGAACTC
CCAATCGATTGGTTTAACCAAAGCATGGCGGAACGACTTGCAAACGCCATTGGAATTTTTGAAGAGGTTGATAACAGAAATGGCTTCCTGTTTTGGGGTTTAAACCTTCG
CATCAAGATTCGCCTTGATCTCAATTGTCCTTTGCACAGAGGGATTCGTATATTTCCAGATGGTCCTTTGAGTGGTCTTTGGGTTCCCATTAGGTATGAAAGGATTCCGG
TGATCTGTTCTTATTGTGGCCTCATTAGCCATTCTCCGCGTGCTTGCACTCTGTTTTTACAGTCGGAAAATAAAGATCATCTTCCACACCGGTACGGGGAGTGGCTGCGG
TTTACAGGTAAAGGGATGATGTCGCCTCCAGTATTGATACGTGAAGAGAATTTGGCCCTAAGTTCGGATATTCTTCAGGGTCAAAGGCTTATGATTGCAGTCTCTCCATC
GTCAACTCCTGCTCCGACAGTCAACGAACTCCCGCGGCCTCGCTTCAATGGTATTCGCATCTACGAACCTGTGTGGTACGCAAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCTTCATCTTTACTTAACGATTGGTCCCAATTGAGTTTGACTTCGGAGGAGGAGGATGTTTCGGTGGTTGCTGATAGGGAGGCTGTGGAGAGAACTGGGATTTC
GCTAGAAGTGTGTTTACTCGAAAAATTAGTTTGTCCTCAGCCTATTGGAGCAGAGGTAATGAGGAGGAATTTTCGATCGGCGTGGAAGATTGACGCTGTTTTGCAGGGGC
CATGGCTATTTGAAAAATTTCTCCTCGTTCTGGTTTTCCCAATCCCTGGTTTGAGGTCATTGGATCACCTTTTTTCTTCCGTTGCTTTTTGGGTGCATATTTTTGAACTC
CCAATCGATTGGTTTAACCAAAGCATGGCGGAACGACTTGCAAACGCCATTGGAATTTTTGAAGAGGTTGATAACAGAAATGGCTTCCTGTTTTGGGGTTTAAACCTTCG
CATCAAGATTCGCCTTGATCTCAATTGTCCTTTGCACAGAGGGATTCGTATATTTCCAGATGGTCCTTTGAGTGGTCTTTGGGTTCCCATTAGGTATGAAAGGATTCCGG
TGATCTGTTCTTATTGTGGCCTCATTAGCCATTCTCCGCGTGCTTGCACTCTGTTTTTACAGTCGGAAAATAAAGATCATCTTCCACACCGGTACGGGGAGTGGCTGCGG
TTTACAGGTAAAGGGATGATGTCGCCTCCAGTATTGATACGTGAAGAGAATTTGGCCCTAAGTTCGGATATTCTTCAGGGTCAAAGGCTTATGATTGCAGTCTCTCCATC
GTCAACTCCTGCTCCGACAGTCAACGAACTCCCGCGGCCTCGCTTCAATGGTATTCGCATCTACGAACCTGTGTGGTACGCAAATTGCTAA
Protein sequenceShow/hide protein sequence
MDPSSLLNDWSQLSLTSEEEDVSVVADREAVERTGISLEVCLLEKLVCPQPIGAEVMRRNFRSAWKIDAVLQGPWLFEKFLLVLVFPIPGLRSLDHLFSSVAFWVHIFEL
PIDWFNQSMAERLANAIGIFEEVDNRNGFLFWGLNLRIKIRLDLNCPLHRGIRIFPDGPLSGLWVPIRYERIPVICSYCGLISHSPRACTLFLQSENKDHLPHRYGEWLR
FTGKGMMSPPVLIREENLALSSDILQGQRLMIAVSPSSTPAPTVNELPRPRFNGIRIYEPVWYANC