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Lag0006161 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006161
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:38389040..38390788
RNA-Seq ExpressionLag0006161
SyntenyLag0006161
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6636592.1 hypothetical protein CIPAW_11G121200 [Carya illinoinensis]9.6e-2645.8Show/hide
Query:  IDVCIRNYSIHHIDVHVTWND-KLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF
        + V +R++S +HIDVH+  +D  +WRFTG +G+P+ + RT +WNL+R L     +PW++GGDLNE+L  HEK G   R   QI  FREVL +C LRDLG+
Subjt:  IDVCIRNYSIHHIDVHVTWND-KLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF

Query:  SGGKFTWCNRRASGVQGKGTGSGADVEKFLD
         G +FTW N         G G  A + + LD
Subjt:  SGGKFTWCNRRASGVQGKGTGSGADVEKFLD

TXG69190.1 hypothetical protein EZV62_004125 [Acer yangbiense]5.6e-2653.1Show/hide
Query:  IDVCIRNYSIHHIDVHVTW-NDKLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF
        IDV + +YS  HID  VT  NDK+WR TGF+G+P    R H WNLLRRL     +PW +GGD NEI+   EK G + R    + +F+E L+DC LRDLGF
Subjt:  IDVCIRNYSIHHIDVHVTW-NDKLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF

Query:  SGGKFTWCNRRAS
         G +FTW NRR S
Subjt:  SGGKFTWCNRRAS

XP_028075737.1 uncharacterized protein LOC114277953 [Camellia sinensis]9.6e-2652.21Show/hide
Query:  IDVCIRNYSIHHIDVHVTWNDKL--WRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLG
        I + I+++S  H+D  +     +  W FTGF+GNP A+LR+ SW LLRRL D   +PW+  GD NEIL+ HEKSG + R  RQ+  FR+VL DC+L DLG
Subjt:  IDVCIRNYSIHHIDVHVTWNDKL--WRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLG

Query:  FSGGKFTWCNRRA
        F G  FTWCN RA
Subjt:  FSGGKFTWCNRRA

XP_042950313.1 uncharacterized protein LOC122282426 [Carya illinoinensis]9.6e-2645.8Show/hide
Query:  IDVCIRNYSIHHIDVHVTWND-KLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF
        + V +R++S +HIDVH+  +D  +WRFTG +G+P+ + RT +WNL+R L     +PW++GGDLNE+L  HEK G   R   QI  FREVL +C LRDLG+
Subjt:  IDVCIRNYSIHHIDVHVTWND-KLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF

Query:  SGGKFTWCNRRASGVQGKGTGSGADVEKFLD
         G +FTW N         G G  A + + LD
Subjt:  SGGKFTWCNRRASGVQGKGTGSGADVEKFLD

XP_042980077.1 uncharacterized protein LOC122310261 [Carya illinoinensis]3.3e-2653.27Show/hide
Query:  IRNYSIHHIDVHVTWND-KLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGFSGGK
        +R++S +HIDVH+  +D  +WRFTG +G+P+A  RT +WNL+R L     IPW++GGDLNE+L  HEK G   R   QI  FREVL +C LRDLG+ G +
Subjt:  IRNYSIHHIDVHVTWND-KLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGFSGGK

Query:  FTWCNRR
        FTW N R
Subjt:  FTWCNRR

TrEMBL top hitse value%identityAlignment
A0A2N9G299 Uncharacterized protein1.2e-2653.1Show/hide
Query:  DGIDVCIRNYSIHHIDVHVTWND-KLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDL
        D + + I++YS+ HID HV   D  +WRFTGF+G+PEA LR  SW LLR+L     +PWV+ GD NEI    EK GR  R  RQ+++FRE L DC+L DL
Subjt:  DGIDVCIRNYSIHHIDVHVTWND-KLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDL

Query:  GFSGGKFTWCNRR
        GF G +FTW N R
Subjt:  GFSGGKFTWCNRR

A0A2N9I236 Peptidylprolyl isomerase3.2e-2744.64Show/hide
Query:  PSWKKRTRVGKVPRGMNLIVDEEFQKRKNGPILFSPGNIKHPKVSYDSCKKAGDGIDVCIRNYSIHHIDVHVTWNDKL-WRFTGFFGNPEANLRTHSWNL
        P+ KKR   G V    +   +   Q R+NG   F  G      + +DS       + + IR++S HHID  VT  D + WR TGF+G PE  LR  SW+L
Subjt:  PSWKKRTRVGKVPRGMNLIVDEEFQKRKNGPILFSPGNIKHPKVSYDSCKKAGDGIDVCIRNYSIHHIDVHVTWNDKL-WRFTGFFGNPEANLRTHSWNL

Query:  LRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGFSGGKFTWCNRRAS
        LRRL   H+ PW++ GD NEI+   EKSGR  R   Q++ FRE L DC LRDLGF G +FTW NRR +
Subjt:  LRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGFSGGKFTWCNRRAS

A0A2N9I6M1 CCHC-type domain-containing protein1.6e-2653.98Show/hide
Query:  DGIDVCIRNYSIHHIDVHVTWNDKL-WRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDL
        D + + I++YS+ HID HV   D + WRFTGF+G+PEA LR  SW LLR+L     +PWV+ GD NEI    EK GR  R  RQ+++FREVL DC+L DL
Subjt:  DGIDVCIRNYSIHHIDVHVTWNDKL-WRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDL

Query:  GFSGGKFTWCNRR
        GF G +FTW N R
Subjt:  GFSGGKFTWCNRR

A0A2N9J3D7 Uncharacterized protein2.5e-2752.25Show/hide
Query:  IDVCIRNYSIHHIDVHVTWNDKL-WRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF
        +DV +R YS+HHIDV V  +D L WR T F+G+PE  LR  SW LLR LC    +PW++ GD NEI    EK  R  R+  Q++ FRE L DC+L+DLGF
Subjt:  IDVCIRNYSIHHIDVHVTWNDKL-WRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF

Query:  SGGKFTWCNRR
        +G +FTW N+R
Subjt:  SGGKFTWCNRR

A0A5C7IIT4 Uncharacterized protein2.7e-2653.1Show/hide
Query:  IDVCIRNYSIHHIDVHVTW-NDKLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF
        IDV + +YS  HID  VT  NDK+WR TGF+G+P    R H WNLLRRL     +PW +GGD NEI+   EK G + R    + +F+E L+DC LRDLGF
Subjt:  IDVCIRNYSIHHIDVHVTW-NDKLWRFTGFFGNPEANLRTHSWNLLRRLCDYHTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGF

Query:  SGGKFTWCNRRAS
         G +FTW NRR S
Subjt:  SGGKFTWCNRRAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTTTCGGATCCTGTTGCACCCAGGGATGAGGTTCCTTATTCGAGACAGAGGCAAGAGGGCATTCGCATATCAGAACCGGTTGATGGCGGTCCACGAAGGGGGTC
AGATATTTTGTCGCCGACGATCTACTCCCTTTCTGGAGGTCCGCCGAGGTACTCAAAAGAGAAGGAAAAATTTTCAGATCTGGCTTTGGCGTCTTCTTGGCGGCCGAAAA
GCTCATGGAGGCGTATTCAGTCAGAGTCAGAATTGGAGGCTCGTCAGGGTATCTCACCAGCAGACGTTACTTCTGAGATGGGAGGGCATTCAATGGGAGTAACGCATTCT
CAGTGTAACATTGTGGTCGTTGATGATGGCATTGAGAGCGATCCGGAAATGTTGGAGGACTTAGTGGATGGTGATGTGTCTACGGCTGTGGGGGAAGAGAGTTGGGCTCC
ATCCTGTGAAGGCCCAGTTCATGATGGAAGGCCCACCTCAATTTGCAATCAGCCCAATGTTATTCAAGCCTCGGTTCAATCTGTGGATGAGGAAGACCAATTTTTGTCTC
TTCCTAACGAGTGTGTTCAGCCCATCAACGAGCAGGCCGGCGCTGGTGGTGTTCGTGGCATTCGTGAGGATGGCTTTGTGTTTTCATCTGCAGCAAATTCTAAGGTTAGG
AATGGTCGTGGGCCTTCATGGAAGAAGAGAACTCGAGTTGGGAAGGTGCCGAGGGGTATGAATTTGATTGTCGATGAGGAGTTTCAGAAACGTAAGAATGGACCGATTTT
GTTTTCACCTGGAAACATTAAACACCCTAAGGTTAGCTATGATAGTTGTAAAAAGGCAGGAGATGGTATTGATGTTTGCATTCGTAACTATTCCATTCATCATATAGATG
TGCATGTTACGTGGAATGATAAACTTTGGCGTTTTACTGGTTTCTTTGGTAACCCTGAAGCTAATCTCCGGACTCATTCTTGGAATCTATTAAGAAGATTATGTGATTAT
CATACAATTCCATGGGTGATTGGAGGGGATTTAAATGAGATTTTGTGGCAACATGAGAAATCAGGTAGGTCGCTTCGTGATTTTAGGCAAATATCGGATTTTCGCGAGGT
TTTGGATGATTGTAATCTTCGTGATCTTGGATTTTCTGGAGGAAAGTTTACATGGTGTAATCGTCGAGCTTCGGGGGTTCAAGGGAAGGGAACCGGTTCTGGGGCAGATG
TCGAAAAGTTTTTAGATTTGAAGAATGGTGGACTCGTTACGAAAAATGTCATGAAATTATCCGACAGTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGGTTTCGGATCCTGTTGCACCCAGGGATGAGGTTCCTTATTCGAGACAGAGGCAAGAGGGCATTCGCATATCAGAACCGGTTGATGGCGGTCCACGAAGGGGGTC
AGATATTTTGTCGCCGACGATCTACTCCCTTTCTGGAGGTCCGCCGAGGTACTCAAAAGAGAAGGAAAAATTTTCAGATCTGGCTTTGGCGTCTTCTTGGCGGCCGAAAA
GCTCATGGAGGCGTATTCAGTCAGAGTCAGAATTGGAGGCTCGTCAGGGTATCTCACCAGCAGACGTTACTTCTGAGATGGGAGGGCATTCAATGGGAGTAACGCATTCT
CAGTGTAACATTGTGGTCGTTGATGATGGCATTGAGAGCGATCCGGAAATGTTGGAGGACTTAGTGGATGGTGATGTGTCTACGGCTGTGGGGGAAGAGAGTTGGGCTCC
ATCCTGTGAAGGCCCAGTTCATGATGGAAGGCCCACCTCAATTTGCAATCAGCCCAATGTTATTCAAGCCTCGGTTCAATCTGTGGATGAGGAAGACCAATTTTTGTCTC
TTCCTAACGAGTGTGTTCAGCCCATCAACGAGCAGGCCGGCGCTGGTGGTGTTCGTGGCATTCGTGAGGATGGCTTTGTGTTTTCATCTGCAGCAAATTCTAAGGTTAGG
AATGGTCGTGGGCCTTCATGGAAGAAGAGAACTCGAGTTGGGAAGGTGCCGAGGGGTATGAATTTGATTGTCGATGAGGAGTTTCAGAAACGTAAGAATGGACCGATTTT
GTTTTCACCTGGAAACATTAAACACCCTAAGGTTAGCTATGATAGTTGTAAAAAGGCAGGAGATGGTATTGATGTTTGCATTCGTAACTATTCCATTCATCATATAGATG
TGCATGTTACGTGGAATGATAAACTTTGGCGTTTTACTGGTTTCTTTGGTAACCCTGAAGCTAATCTCCGGACTCATTCTTGGAATCTATTAAGAAGATTATGTGATTAT
CATACAATTCCATGGGTGATTGGAGGGGATTTAAATGAGATTTTGTGGCAACATGAGAAATCAGGTAGGTCGCTTCGTGATTTTAGGCAAATATCGGATTTTCGCGAGGT
TTTGGATGATTGTAATCTTCGTGATCTTGGATTTTCTGGAGGAAAGTTTACATGGTGTAATCGTCGAGCTTCGGGGGTTCAAGGGAAGGGAACCGGTTCTGGGGCAGATG
TCGAAAAGTTTTTAGATTTGAAGAATGGTGGACTCGTTACGAAAAATGTCATGAAATTATCCGACAGTTTATAG
Protein sequenceShow/hide protein sequence
MPVSDPVAPRDEVPYSRQRQEGIRISEPVDGGPRRGSDILSPTIYSLSGGPPRYSKEKEKFSDLALASSWRPKSSWRRIQSESELEARQGISPADVTSEMGGHSMGVTHS
QCNIVVVDDGIESDPEMLEDLVDGDVSTAVGEESWAPSCEGPVHDGRPTSICNQPNVIQASVQSVDEEDQFLSLPNECVQPINEQAGAGGVRGIREDGFVFSSAANSKVR
NGRGPSWKKRTRVGKVPRGMNLIVDEEFQKRKNGPILFSPGNIKHPKVSYDSCKKAGDGIDVCIRNYSIHHIDVHVTWNDKLWRFTGFFGNPEANLRTHSWNLLRRLCDY
HTIPWVIGGDLNEILWQHEKSGRSLRDFRQISDFREVLDDCNLRDLGFSGGKFTWCNRRASGVQGKGTGSGADVEKFLDLKNGGLVTKNVMKLSDSL