; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006163 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006163
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:38405383..38407452
RNA-Seq ExpressionLag0006163
SyntenyLag0006163
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PRQ55763.1 putative RNA-directed DNA polymerase [Rosa chinensis]6.2e-8531.6Show/hide
Query:  SLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WC------------------------DLDAVLGFIPRKVTET
        +LE +L+ LLL+E+ +WKQR++  WL  GD NT++FHQ+A++RR+KN           WC                         +D V   +P  +TE 
Subjt:  SLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WC------------------------DLDAVLGFIPRKVTET

Query:  MNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDILRL-------------------WEWNHTNIVLIPKIR------QLKS-------------
        MN +L    + +EV   +K  HP KAPGPDGF   F +    L                    + N TN+ LIPK++      QL+              
Subjt:  MNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDILRL-------------------WEWNHTNIVLIPKIR------QLKS-------------

Query:  --------------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYDEWSEGF----------------------------FVM
                                  I+DN +   E  HFL ++ +G VGY ALKLDMSKAYD    GF                            F++
Subjt:  --------------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYDEWSEGF----------------------------FVM

Query:  LVSARNR------------------------------------SMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKS
          + R R                                    S+ GV +    P ISHLFFADDS +FFK   ++    K + + YEKASGQ +N  KS
Subjt:  LVSARNR------------------------------------SMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKS

Query:  MVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNKIA
         V FS+NV  A +  L+  L +   +    YLGLP+     KS  F FL +K                           +IPTYVM CF++PK +  ++ 
Subjt:  MVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNKIA

Query:  ALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLK
         L A+FWWG   + K++HW  WE LC PK  GGL FR +V FNQA+LAKQ WR++ NPN  ++R+   +YF +   +   +   SS+  K  ++G ELL+
Subjt:  ALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLK

Query:  KGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTSTNSE
        KG+R  +GNG  I ++ D WLP P +FR +S P   +E + V + +    +E
Subjt:  KGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTSTNSE

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.8e-8433.95Show/hide
Query:  LSIDFELVHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKNWCDLDAVLGFIPRKVTETMNQMLTTPYSREEVVAVIKSFHPTKA
        L +DF ++H+LE  L  LL  EEI+WKQRSRE WLKWG                 N  D++A++  IP ++T  +N+ L  PY++EE+   I+   PTKA
Subjt:  LSIDFELVHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKNWCDLDAVLGFIPRKVTETMNQMLTTPYSREEVVAVIKSFHPTKA

Query:  PGPDGFPALFIKDILR-------------------LWEWNHTNIVLIPKIRQLKS---------------------------------------------
         GPDGFPALF +                       + +WN T I LIPKI+Q +S                                             
Subjt:  PGPDGFPALFIKDILR-------------------LWEWNHTNIVLIPKIRQLKS---------------------------------------------

Query:  ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW------------SEGF-----------------------------------------FV
        I+DN+I+GHE LH +N    G +G AALKLD+SKA+D  EW            +EG+                                         F+
Subjt:  ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW------------SEGF-----------------------------------------FV

Query:  M-------LVSARNRS--MAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSE
        +       L++  N S  + G+   +    I+HL FADDSL+F +    +    + +L +Y +ASGQC+N SKS + FS NV    +QYL  IL++K+  
Subjt:  M-------LVSARNRS--MAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSE

Query:  SLGNYLGLPSSFHKGKSRDFQFLLDKAIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWR
          GNYLGLPS F + +                                          G+ +++HW +W  +C PKE GGLNFR+L  FNQA++AK  WR
Subjt:  SLGNYLGLPSSFHKGKSRDFQFLLDKAIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWR

Query:  VLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTS
         L +PNL VS+VL  +YF+D+S+L  ++   SS+F KGF+WG +LL KG+R  +GNG +I+ F DPWLPRP TF+ L   N  + D  VA F+T+
Subjt:  VLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTS

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]2.2e-8230.43Show/hide
Query:  TTVYNR--KAVRHHSSLSSSESGLSIDFEL---VHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WCD----
        +T+Y +  K ++   S  ++ +   +D +L   ++ L  +++ LL +EE YW QR++  WLK GDRNTK+FH +A+ RR++N           WCD    
Subjt:  TTVYNR--KAVRHHSSLSSSESGLSIDFEL---VHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WCD----

Query:  --------------------LDAVLGFIPRKVTETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDI-------------------LRLWEW
                            ++ V   IP KVTE MN+ L   +++EEV   +K  HP KAPGPDG  A+F +                     L + E 
Subjt:  --------------------LDAVLGFIPRKVTETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDI-------------------LRLWEW

Query:  NHTNIVLIPKIRQLKS---------------------------------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYDEW
        N TNI LIPK    K                                              ITDN+++  E +H+L+ K  G+ G+ A+KLDMSKA+D  
Subjt:  NHTNIVLIPKIRQLKS---------------------------------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYDEW

Query:  SEGFFVMLV----------------------------------------------------------------SARNRSMAGVSLAQTCPKISHLFFADD
          GF   ++                                                                +ARN+ + G+S+ + CPK++HLFFADD
Subjt:  SEGFFVMLV----------------------------------------------------------------SARNRSMAGVSLAQTCPKISHLFFADD

Query:  SLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK-------------
        S++F K A E+    ++IL  YE+ASGQ +N  KS + FS N    +   +  IL    +     YLGLPS   + KS+ F  L +K             
Subjt:  SLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK-------------

Query:  --------------AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRV
                      AIPTY M CF +P+G+ + +  +   FWWG      ++ W  W+ +C  K SGGL FR L  FN AMLAKQAWR+L NPN  V RV
Subjt:  --------------AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRV

Query:  LSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSP
        L  RYF    +LN     + S+  +     +E++++G R  +GNG  I ++ D WLP P T++V+SP
Subjt:  LSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSP

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]2.9e-8232.13Show/hide
Query:  VHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQK-----------NWCD------------------------LDAVLGFIPRKVT
        ++ L ++++ LL  EEI W+QRSR  WL  GDRNTK+FH KA+ RR++           NW D                        +  VL  IP  VT
Subjt:  VHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQK-----------NWCD------------------------LDAVLGFIPRKVT

Query:  ETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALF---------------IKDILR----LWEWNHTNIVLIPKIR---------------------
        E MN  L   ++REE+   +   HPTKAPGPDG  A+F               + D+L     + E N TNI L+PKI+                     
Subjt:  ETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALF---------------IKDILR----LWEWNHTNIVLIPKIR---------------------

Query:  ------QLKS------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW-------------------------------
              +LK+                  ITDN+++  E +H+L  K +G+ G+AA+KLDMSKAYD  EW                               
Subjt:  ------QLKS------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW-------------------------------

Query:  ------------------------------SEGFFVMLVS-ARNRSMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLS
                                      ++GF  +L   AR   ++GVS+ + CPKI+HLFFADDSL+F K  +++      IL+ YE ASGQ +N+ 
Subjt:  ------------------------------SEGFFVMLVS-ARNRSMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLS

Query:  KSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNK
        KS V FS N  D     + ++L          YLGLPS   K K   F  + ++                           AIPTY M CF+IPK +  +
Subjt:  KSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNK

Query:  IAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMEL
        I A+  +FWWG  G   ++ W  W+ LCK K++GG+ FR L  FN AMLAKQ WR++SNPN  V+++   RY+    V       + S+  +    G+E+
Subjt:  IAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMEL

Query:  LKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPP
        +++G R  +GNG  I ++ D WLP P T++V+SPP
Subjt:  LKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPP

XP_024172256.1 uncharacterized protein LOC112178331 [Rosa chinensis]3.8e-8232.51Show/hide
Query:  LERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WCD--------------------------LDAVLGFIPRKVTE
        L  +L+ LL EE  YW+QRS+ SWL  GDRNTK+FH KA++RR KN           W D                          + +V+  +  KVT 
Subjt:  LERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WCD--------------------------LDAVLGFIPRKVTE

Query:  TMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIK--------DILR-----------LWEWNHTNIVLIPKIRQLKS--------ITDNMILGHE
         MN  L  PYS  E+   +   +PTKAPGPDG P LF +        D++            L E N+T+I LIPK++ L S        ITDN ++ +E
Subjt:  TMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIK--------DILR-----------LWEWNHTNIVLIPKIRQLKS--------ITDNMILGHE

Query:  TLHFLNQKCKGRVGYAALKLDMSKAYD--EWS--------EGF----------------FVMLVSARNR-------------------------------
          HF++       G  +LKLDMSKAYD  EWS         GF                +  L++ + R                               
Subjt:  TLHFLNQKCKGRVGYAALKLDMSKAYD--EWS--------EGF----------------FVMLVSARNR-------------------------------

Query:  -------SMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPS
                + G+ + +  P I HL FADDSLVF K    +    +++L AYE ASGQ +N +KS + FS+ V +A +  L+  L + +      YLGLP+
Subjt:  -------SMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPS

Query:  SFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNF
           + ++  F ++ ++                           A+P+Y M CF +P    + +  +C+KFWWGS  + +++HW  WE LC+ KE GG+ F
Subjt:  SFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNF

Query:  RELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVL---SPP
        R+L   N A+LAKQ WR++  P   VSR+   RYF  SS LN T+  +SS   +G      +L+ G+R  +GNG SIR++ DPW+PRP  FR +     P
Subjt:  RELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVL---SPP

Query:  NMIVEDVYV
         ++V D+ V
Subjt:  NMIVEDVYV

TrEMBL top hitse value%identityAlignment
A0A2P6SAP1 Putative RNA-directed DNA polymerase3.0e-8531.6Show/hide
Query:  SLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WC------------------------DLDAVLGFIPRKVTET
        +LE +L+ LLL+E+ +WKQR++  WL  GD NT++FHQ+A++RR+KN           WC                         +D V   +P  +TE 
Subjt:  SLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WC------------------------DLDAVLGFIPRKVTET

Query:  MNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDILRL-------------------WEWNHTNIVLIPKIR------QLKS-------------
        MN +L    + +EV   +K  HP KAPGPDGF   F +    L                    + N TN+ LIPK++      QL+              
Subjt:  MNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDILRL-------------------WEWNHTNIVLIPKIR------QLKS-------------

Query:  --------------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYDEWSEGF----------------------------FVM
                                  I+DN +   E  HFL ++ +G VGY ALKLDMSKAYD    GF                            F++
Subjt:  --------------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYDEWSEGF----------------------------FVM

Query:  LVSARNR------------------------------------SMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKS
          + R R                                    S+ GV +    P ISHLFFADDS +FFK   ++    K + + YEKASGQ +N  KS
Subjt:  LVSARNR------------------------------------SMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKS

Query:  MVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNKIA
         V FS+NV  A +  L+  L +   +    YLGLP+     KS  F FL +K                           +IPTYVM CF++PK +  ++ 
Subjt:  MVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNKIA

Query:  ALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLK
         L A+FWWG   + K++HW  WE LC PK  GGL FR +V FNQA+LAKQ WR++ NPN  ++R+   +YF +   +   +   SS+  K  ++G ELL+
Subjt:  ALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLK

Query:  KGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTSTNSE
        KG+R  +GNG  I ++ D WLP P +FR +S P   +E + V + +    +E
Subjt:  KGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTSTNSE

A0A6J1DX30 uncharacterized protein LOC1110248748.8e-8533.95Show/hide
Query:  LSIDFELVHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKNWCDLDAVLGFIPRKVTETMNQMLTTPYSREEVVAVIKSFHPTKA
        L +DF ++H+LE  L  LL  EEI+WKQRSRE WLKWG                 N  D++A++  IP ++T  +N+ L  PY++EE+   I+   PTKA
Subjt:  LSIDFELVHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKNWCDLDAVLGFIPRKVTETMNQMLTTPYSREEVVAVIKSFHPTKA

Query:  PGPDGFPALFIKDILR-------------------LWEWNHTNIVLIPKIRQLKS---------------------------------------------
         GPDGFPALF +                       + +WN T I LIPKI+Q +S                                             
Subjt:  PGPDGFPALFIKDILR-------------------LWEWNHTNIVLIPKIRQLKS---------------------------------------------

Query:  ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW------------SEGF-----------------------------------------FV
        I+DN+I+GHE LH +N    G +G AALKLD+SKA+D  EW            +EG+                                         F+
Subjt:  ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW------------SEGF-----------------------------------------FV

Query:  M-------LVSARNRS--MAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSE
        +       L++  N S  + G+   +    I+HL FADDSL+F +    +    + +L +Y +ASGQC+N SKS + FS NV    +QYL  IL++K+  
Subjt:  M-------LVSARNRS--MAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSE

Query:  SLGNYLGLPSSFHKGKSRDFQFLLDKAIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWR
          GNYLGLPS F + +                                          G+ +++HW +W  +C PKE GGLNFR+L  FNQA++AK  WR
Subjt:  SLGNYLGLPSSFHKGKSRDFQFLLDKAIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWR

Query:  VLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTS
         L +PNL VS+VL  +YF+D+S+L  ++   SS+F KGF+WG +LL KG+R  +GNG +I+ F DPWLPRP TF+ L   N  + D  VA F+T+
Subjt:  VLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTS

A0A7N2L6Z9 Reverse transcriptase domain-containing protein2.2e-8332.14Show/hide
Query:  VHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WCD------------------------LDAVLGFIPRKVT
        ++ + R+L+ LL +EEI+W QRS+  WLK GDRNTK+FH +A+ RR++N           WC+                        +D V   IP  +T
Subjt:  VHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WCD------------------------LDAVLGFIPRKVT

Query:  ETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKD------------ILRLWEW-------NHTNIVLIPK-----------------------
        E MN  L+  ++REE+V  +K  HPTK+PGPDG  A+F +             IL +  +       N TNIVLIPK                       
Subjt:  ETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKD------------ILRLWEW-------NHTNIVLIPK-----------------------

Query:  ----IRQLKS------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW------------SEGFFVMLV----------
              +LK+                  ITDN+++ +E +H+L  K  G+  + A KLDMSKA+D  EW            +EG+  +++          
Subjt:  ----IRQLKS------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW------------SEGFFVMLV----------

Query:  ----------------------------------------SARNRSMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLS
                                                +ARN+ + G+SL + CP+I+HLFFADDSL+F K   E+    K IL+ YE ASGQ VN  
Subjt:  ----------------------------------------SARNRSMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLS

Query:  KSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNK
        KS + FS N     ++ +  IL          YLGLPS   + K   F  + ++                           AIPTY M CF +PK + ++
Subjt:  KSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNK

Query:  IAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMEL
        +  +   FWWG      +V W  W  +CKPK  GGL FR L  FN A+LAKQAWR+L+NP    +R+L  +YF    VLN +   N S+  +     +E+
Subjt:  IAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMEL

Query:  LKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVED
        LKKG R  +GNG  I ++ D WLP P T++V++PP  I ED
Subjt:  LKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVED

A0A803PWX1 Uncharacterized protein2.1e-8631.96Show/hide
Query:  FELVHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WCD--------------------------LDAVLGFI
        +E +  +E +L+ LL ++E YW+QRSR  WL+WGDRNTK+FH KA+SRR+KN           W D                          +  VL  +
Subjt:  FELVHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------WCD--------------------------LDAVLGFI

Query:  PRKVTETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDILRLWE----------------------WNHTNIVLIPKIRQLKSIT-------
          KV+ +MN+ L   +S EEVV  +K  +PTKAPG DG PALF +   + W                        N T + LIPK+ + + I        
Subjt:  PRKVTETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDILRLWE----------------------WNHTNIVLIPKIRQLKSIT-------

Query:  --------------------------------------DNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW-----------------------
                                              DN I+G+E LH + +         ALKLDM+KAYD  EW                       
Subjt:  --------------------------------------DNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW-----------------------

Query:  --------------------------------------SEGFFVMLVSARNR-SMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKA
                                              +E F  ++  A +   + G+   +    +SHLFFADDSLVF     ++   FK +L+ Y KA
Subjt:  --------------------------------------SEGFFVMLVSARNR-SMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKA

Query:  SGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFK
        SGQ VN  KS +CF R V      +L+ I+ +KV ++ G YLGLPS   + K + F+F+ +K                           AIPTY M CF+
Subjt:  SGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFK

Query:  IPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRK
        +PK  +N I ++ A+FWWGS     ++HW +W+ LCK KE GGL FR+L  FNQA+LAKQ WR +  PN   SRVL   Y+ +  V+   S  ++SF  +
Subjt:  IPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRK

Query:  GFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVAD
          VWG ++++KG R  +GNG+S+R+  DPWLPRP TF++   P  + + +YV D
Subjt:  GFVWGMELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVAD

M5VU98 Reverse transcriptase domain-containing protein6.3e-8330.77Show/hide
Query:  LERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------W------------------------CDLDAVLGFIPRKVTETM
        +++ LD LL + E+YW QRSRE+WLK GD+NT +FHQKAT+RR++N           W                          ++ +L  +  KVT  M
Subjt:  LERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKN-----------W------------------------CDLDAVLGFIPRKVTETM

Query:  NQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDILR-------------------LWEWNHTNIVLIPKIRQLKS--------------------
         Q+L   +S +E+   +    P+KAPGPDG P LF +   R                   L + NHT + LIPK+++ ++                    
Subjt:  NQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALFIKDILR-------------------LWEWNHTNIVLIPKIRQLKS--------------------

Query:  -------------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW----------------------------------
                                 ITDN I+  E  HFL Q+ +GR G  ALKLDMSKAYD  EW                                  
Subjt:  -------------------------ITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYD--EW----------------------------------

Query:  ---------------------------SEGFFVMLVSA-RNRSMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSM
                                   +EGF  +L  A R   + G+ + +  P +SHLFFADDS VF K    + G  K I + YE ASGQ +N  KS 
Subjt:  ---------------------------SEGFFVMLVSA-RNRSMAGVSLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSM

Query:  VCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNKIAA
        V FS N+   ++  L+ +L +   +S   YLGLP    + K+  F++L ++                           +IP YVM CF +P+G+ ++I  
Subjt:  VCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDK---------------------------AIPTYVMGCFKIPKGILNKIAA

Query:  LCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKK
        + A+FWWG  G+++++HW RWE LCK K  GG+ FR L  FN AMLAKQ WR++ NP+   SR+L  +YF  ++    T     S   K      ++L+ 
Subjt:  LCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWGMELLKK

Query:  GIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTSTNS
        G R  +G+G S+R++ D W+PRP TF V++ P   +E+  V++ + +  S
Subjt:  GIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTSTNS

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.2e-1530.14Show/hide
Query:  AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRY----FQDSS
        ++P + M    +P+ ILN++  L   F WGS  + K+ H  +W  +C PK+ GGL  R   + N+A+++K  WR+L   N   + VL  +Y     +DS 
Subjt:  AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRY----FQDSS

Query:  VLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWL
         L +     SS +R   +   +++  G+    G+G  IR + D W+
Subjt:  VLNVTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWL

P93295 Uncharacterized mitochondrial protein AtMg003102.1e-2737.06Show/hide
Query:  AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKE-SGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLN
        A+P Y M CF++ K +  K+ +   +FWW S  + +++ W  W+ LCK KE  GGL FR+L  FNQA+LAKQ++R++  P+  +SR+L  RYF  SS++ 
Subjt:  AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKE-SGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLN

Query:  VTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWL
         +     S+  +  + G ELL +G+ + +G+G   +++ D W+
Subjt:  VTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWL

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.4e-0522.7Show/hide
Query:  FELVHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKNWC---------------------------------------DLDAVLG
        F + H   ++ +F     E +++Q+SR  WL+ GD NT++FH+   + + KN                                          +  +  
Subjt:  FELVHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKNWC---------------------------------------DLDAVLG

Query:  FIPRKVTETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALF---------------IKDILR----LWEWNHTNIVLIPKI
          P +  +T+   L+   S +E+ A + +    KAPGPD F A F               +K+  R    L  +N T I LIPK+
Subjt:  FIPRKVTETMNQMLTTPYSREEVVAVIKSFHPTKAPGPDGFPALF---------------IKDILR----LWEWNHTNIVLIPKI

AT4G29090.1 Ribonuclease H-like superfamily protein6.8e-2939.44Show/hide
Query:  AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNV
        A+PTY M CF +PK +  +I ++ A FWW +  + K +HWK W+ L   K  GG+ F+++  FN A+L KQ WR+LS P   +++V   RYF  S  LN 
Subjt:  AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNV

Query:  TSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWL
              SF  K      E+L++G R  +GNG  I ++R  WL
Subjt:  TSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.5e-2837.06Show/hide
Query:  AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKE-SGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLN
        A+P Y M CF++ K +  K+ +   +FWW S  + +++ W  W+ LCK KE  GGL FR+L  FNQA+LAKQ++R++  P+  +SR+L  RYF  SS++ 
Subjt:  AIPTYVMGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKE-SGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLN

Query:  VTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWL
         +     S+  +  + G ELL +G+ + +G+G   +++ D W+
Subjt:  VTSRPNSSFFRKGFVWGMELLKKGIRKNLGNGHSIRMFRDPWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGGAAAGAAACAACCGTGTACAATAGGAAGGCGGTAAGGCATCACTCGTCCTTGTCCTCGTCCGAAAGTGGTTTGTCTATTGATTTTGAGTTGGTGCATTCCCT
GGAGCGTCAGTTAGACTTTCTTCTTTTGGAAGAAGAAATTTACTGGAAACAGCGATCTAGAGAGAGTTGGCTGAAGTGGGGTGATCGCAACACCAAGTGGTTTCACCAGA
AAGCCACGTCGAGGAGGCAGAAGAACTGGTGTGATCTCGATGCGGTTCTTGGATTTATTCCAAGGAAAGTCACGGAGACAATGAACCAAATGCTCACGACCCCTTATTCA
AGAGAAGAAGTTGTAGCTGTAATCAAGAGTTTTCATCCAACCAAGGCGCCAGGACCAGATGGATTTCCTGCTTTGTTCATCAAAGATATTTTGAGATTGTGGGAGTGGAA
TCATACTAATATTGTGCTTATTCCCAAGATTCGACAGCTCAAATCGATTACGGATAACATGATTCTGGGGCACGAAACTTTACATTTTCTTAATCAGAAGTGTAAAGGGA
GAGTTGGGTATGCAGCCTTAAAGCTTGATATGAGCAAAGCATATGACGAGTGGAGTGAAGGGTTTTTTGTCATGTTGGTCTCTGCTCGAAATAGATCTATGGCTGGGGTA
TCATTGGCTCAAACCTGTCCTAAAATTTCTCATTTATTTTTCGCTGATGACAGTCTAGTTTTTTTTAAAGTTGCGGCAGAAGATTTTGGTTTTTTTAAAACGATTTTGAA
GGCTTATGAGAAAGCCTCGGGCCAGTGTGTTAATTTAAGCAAGTCGATGGTGTGCTTTTCGAGAAATGTTTTTGATGCCTCTGAGCAATATCTCAGTCAAATCTTGTCTA
TGAAGGTGTCTGAATCATTGGGTAATTACCTTGGGTTACCATCAAGTTTCCATAAAGGTAAATCTCGTGATTTCCAATTCTTACTTGATAAAGCTATACCGACATATGTG
ATGGGTTGCTTTAAGATTCCCAAAGGGATCTTAAACAAAATTGCGGCTTTATGTGCCAAATTTTGGTGGGGGTCTGATGGGGATCATAAGAGAGTACATTGGAAAAGATG
GGAGGATCTTTGTAAACCCAAGGAATCTGGGGGTTTGAACTTTAGGGAGCTAGTAAACTTCAATCAAGCGATGCTGGCGAAGCAAGCCTGGAGGGTTTTATCTAATCCAA
ATCTTACTGTTTCTAGAGTTTTGAGTGGGAGATATTTTCAAGATTCATCGGTGTTGAATGTGACATCTCGACCCAATTCATCCTTTTTTCGGAAAGGTTTTGTATGGGGA
ATGGAGCTGCTGAAGAAGGGGATTAGGAAGAATCTTGGTAATGGACATTCGATTAGAATGTTTAGAGATCCATGGCTTCCAAGGCCATGTACTTTTAGGGTGCTTTCTCC
ACCCAACATGATTGTTGAGGATGTGTATGTGGCTGATTTTCTCACGTCAACTAATAGCGAGCATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGGGGAAAGAAACAACCGTGTACAATAGGAAGGCGGTAAGGCATCACTCGTCCTTGTCCTCGTCCGAAAGTGGTTTGTCTATTGATTTTGAGTTGGTGCATTCCCT
GGAGCGTCAGTTAGACTTTCTTCTTTTGGAAGAAGAAATTTACTGGAAACAGCGATCTAGAGAGAGTTGGCTGAAGTGGGGTGATCGCAACACCAAGTGGTTTCACCAGA
AAGCCACGTCGAGGAGGCAGAAGAACTGGTGTGATCTCGATGCGGTTCTTGGATTTATTCCAAGGAAAGTCACGGAGACAATGAACCAAATGCTCACGACCCCTTATTCA
AGAGAAGAAGTTGTAGCTGTAATCAAGAGTTTTCATCCAACCAAGGCGCCAGGACCAGATGGATTTCCTGCTTTGTTCATCAAAGATATTTTGAGATTGTGGGAGTGGAA
TCATACTAATATTGTGCTTATTCCCAAGATTCGACAGCTCAAATCGATTACGGATAACATGATTCTGGGGCACGAAACTTTACATTTTCTTAATCAGAAGTGTAAAGGGA
GAGTTGGGTATGCAGCCTTAAAGCTTGATATGAGCAAAGCATATGACGAGTGGAGTGAAGGGTTTTTTGTCATGTTGGTCTCTGCTCGAAATAGATCTATGGCTGGGGTA
TCATTGGCTCAAACCTGTCCTAAAATTTCTCATTTATTTTTCGCTGATGACAGTCTAGTTTTTTTTAAAGTTGCGGCAGAAGATTTTGGTTTTTTTAAAACGATTTTGAA
GGCTTATGAGAAAGCCTCGGGCCAGTGTGTTAATTTAAGCAAGTCGATGGTGTGCTTTTCGAGAAATGTTTTTGATGCCTCTGAGCAATATCTCAGTCAAATCTTGTCTA
TGAAGGTGTCTGAATCATTGGGTAATTACCTTGGGTTACCATCAAGTTTCCATAAAGGTAAATCTCGTGATTTCCAATTCTTACTTGATAAAGCTATACCGACATATGTG
ATGGGTTGCTTTAAGATTCCCAAAGGGATCTTAAACAAAATTGCGGCTTTATGTGCCAAATTTTGGTGGGGGTCTGATGGGGATCATAAGAGAGTACATTGGAAAAGATG
GGAGGATCTTTGTAAACCCAAGGAATCTGGGGGTTTGAACTTTAGGGAGCTAGTAAACTTCAATCAAGCGATGCTGGCGAAGCAAGCCTGGAGGGTTTTATCTAATCCAA
ATCTTACTGTTTCTAGAGTTTTGAGTGGGAGATATTTTCAAGATTCATCGGTGTTGAATGTGACATCTCGACCCAATTCATCCTTTTTTCGGAAAGGTTTTGTATGGGGA
ATGGAGCTGCTGAAGAAGGGGATTAGGAAGAATCTTGGTAATGGACATTCGATTAGAATGTTTAGAGATCCATGGCTTCCAAGGCCATGTACTTTTAGGGTGCTTTCTCC
ACCCAACATGATTGTTGAGGATGTGTATGTGGCTGATTTTCTCACGTCAACTAATAGCGAGCATAGCTAG
Protein sequenceShow/hide protein sequence
MRGKETTVYNRKAVRHHSSLSSSESGLSIDFELVHSLERQLDFLLLEEEIYWKQRSRESWLKWGDRNTKWFHQKATSRRQKNWCDLDAVLGFIPRKVTETMNQMLTTPYS
REEVVAVIKSFHPTKAPGPDGFPALFIKDILRLWEWNHTNIVLIPKIRQLKSITDNMILGHETLHFLNQKCKGRVGYAALKLDMSKAYDEWSEGFFVMLVSARNRSMAGV
SLAQTCPKISHLFFADDSLVFFKVAAEDFGFFKTILKAYEKASGQCVNLSKSMVCFSRNVFDASEQYLSQILSMKVSESLGNYLGLPSSFHKGKSRDFQFLLDKAIPTYV
MGCFKIPKGILNKIAALCAKFWWGSDGDHKRVHWKRWEDLCKPKESGGLNFRELVNFNQAMLAKQAWRVLSNPNLTVSRVLSGRYFQDSSVLNVTSRPNSSFFRKGFVWG
MELLKKGIRKNLGNGHSIRMFRDPWLPRPCTFRVLSPPNMIVEDVYVADFLTSTNSEHS