; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006175 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006175
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like domain-containing protein
Genome locationchr6:38590878..38593201
RNA-Seq ExpressionLag0006175
SyntenyLag0006175
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019107216.1 PREDICTED: uncharacterized protein LOC109136049 [Beta vulgaris subsp. vulgaris]7.4e-0852.05Show/hide
Query:  CISTVSCSMLVSGYPSKDFKPSRGIRQGDLLSPYLF-LCALKMPHWELIPPLHGEASIGVDLFLKGYREHWLT
        CI+TVS S+LV+G P + F P RGIRQGD LSPY+F LCA  +        L G  S+GV L   G R H+LT
Subjt:  CISTVSCSMLVSGYPSKDFKPSRGIRQGDLLSPYLF-LCALKMPHWELIPPLHGEASIGVDLFLKGYREHWLT

XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]2.1e-1532.45Show/hide
Query:  VDLFLKGYREHWLTLDYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNII---QPDKN--KLINLIAGKLSKIKGRSHSYQINLKASRG-ENPSSQ
        V+ F    R HW   D W+WL   LS +E+  SM++ W IW  RN ++     I   Q D++    IN    K + I     S Q +    RG EN +  
Subjt:  VDLFLKGYREHWLTLDYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNII---QPDKN--KLINLIAGKLSKIKGRSHSYQINLKASRG-ENPSSQ

Query:  GI-WNPPPPLCWKLNVDASWNLLEDRGGLGWIVRDSGVGQLSGMLLFKHCPKEKNRVAHSIERGGVGLTRHTNFYNLGQRLPSTLEGE
        G+ W+ PP  CWKLN DASW+   + GG+GWI+ D        ++L  +C   + +  +++E   + + R   F N+  R P  LE +
Subjt:  GI-WNPPPPLCWKLNVDASWNLLEDRGGLGWIVRDSGVGQLSGMLLFKHCPKEKNRVAHSIERGGVGLTRHTNFYNLGQRLPSTLEGE

XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]1.3e-0935.88Show/hide
Query:  LDYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWN
        +DY+DW+ ++    +    ++L+WSIW +RN  +++  I QP   K   + A   SKI   + +   NL       P + G W PP    WKLNVDA+W 
Subjt:  LDYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWN

Query:  LLEDRGGLGWIVRDSGVGQLSGMLLFKHCPK
             GGLGWIVRDS      G  +   C K
Subjt:  LLEDRGGLGWIVRDSGVGQLSGMLLFKHCPK

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]2.2e-0735.64Show/hide
Query:  SMILMWSIWIFRNNNL-----NNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVR
        SMI+ W IW  RN ++     +    IQ   ++ I   AG+ + +KG+S +  ++L    G+N  ++  W PP    WKLN DA+W    + GG+GWI+R
Subjt:  SMILMWSIWIFRNNNL-----NNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVR

Query:  D
        D
Subjt:  D

XP_023880292.1 uncharacterized protein LOC111992663 [Quercus suber]2.8e-0726.02Show/hide
Query:  MSCISTVSCSMLVSGYPSKDFKPSRGIRQGDLLSPYLFLCALKMPHWELIPPLHGEASIGVDLFLKGYRE-------HWLTLDYWDWLNQNLSSKELGVS
        M CIS+++ ++ ++G PS    P+RG+RQGD LSPYLFL  +     E +  L  +A+   D  L+G  E        ++ + ++  +  +    E+   
Subjt:  MSCISTVSCSMLVSGYPSKDFKPSRGIRQGDLLSPYLFLCALKMPHWELIPPLHGEASIGVDLFLKGYRE-------HWLTLDYWDWLNQNLSSKELGVS

Query:  MILMWSIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRG-ENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVRD
        +++ W++W  RN   N        K     L+ G L  +     +YQ  L  S   + P+    W P     +K+N+D +    +   G+G +++D
Subjt:  MILMWSIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRG-ENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVRD

TrEMBL top hitse value%identityAlignment
A0A2N9GIZ4 Reverse transcriptase domain-containing protein6.8e-0731.25Show/hide
Query:  CISTVSCSMLVSGYPSKDFKPSRGIRQGDLLSPYLFLCALKMPHWELIPPLHGEASIGVDLFLKGYR--------EHWLTLDYWDWLNQNLSSKELGVSM
        C++TVS S+L++G PSK F P+RG+RQGD LSPYLFL    +    L+   +        L LKG +         H L  D +    ++  S    +  
Subjt:  CISTVSCSMLVSGYPSKDFKPSRGIRQGDLLSPYLFLCALKMPHWELIPPLHGEASIGVDLFLKGYR--------EHWLTLDYWDWLNQNLSSKELGVSM

Query:  ILMW-------SIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASR
         L W       SI + +     +PN+ + DK+ L NL+  KL    G+       L+  R
Subjt:  ILMW-------SIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASR

A0A6J1CQG0 uncharacterized protein LOC1110132161.0e-1532.45Show/hide
Query:  VDLFLKGYREHWLTLDYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNII---QPDKN--KLINLIAGKLSKIKGRSHSYQINLKASRG-ENPSSQ
        V+ F    R HW   D W+WL   LS +E+  SM++ W IW  RN ++     I   Q D++    IN    K + I     S Q +    RG EN +  
Subjt:  VDLFLKGYREHWLTLDYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNII---QPDKN--KLINLIAGKLSKIKGRSHSYQINLKASRG-ENPSSQ

Query:  GI-WNPPPPLCWKLNVDASWNLLEDRGGLGWIVRDSGVGQLSGMLLFKHCPKEKNRVAHSIERGGVGLTRHTNFYNLGQRLPSTLEGE
        G+ W+ PP  CWKLN DASW+   + GG+GWI+ D        ++L  +C   + +  +++E   + + R   F N+  R P  LE +
Subjt:  GI-WNPPPPLCWKLNVDASWNLLEDRGGLGWIVRDSGVGQLSGMLLFKHCPKEKNRVAHSIERGGVGLTRHTNFYNLGQRLPSTLEGE

A0A6J1D4B6 uncharacterized protein LOC1110171816.5e-1035.88Show/hide
Query:  LDYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWN
        +DY+DW+ ++    +    ++L+WSIW +RN  +++  I QP   K   + A   SKI   + +   NL       P + G W PP    WKLNVDA+W 
Subjt:  LDYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWN

Query:  LLEDRGGLGWIVRDSGVGQLSGMLLFKHCPK
             GGLGWIVRDS      G  +   C K
Subjt:  LLEDRGGLGWIVRDSGVGQLSGMLLFKHCPK

A0A6J1DSV1 uncharacterized protein LOC1110236081.0e-0735.64Show/hide
Query:  SMILMWSIWIFRNNNL-----NNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVR
        SMI+ W IW  RN ++     +    IQ   ++ I   AG+ + +KG+S +  ++L    G+N  ++  W PP    WKLN DA+W    + GG+GWI+R
Subjt:  SMILMWSIWIFRNNNL-----NNPNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVR

Query:  D
        D
Subjt:  D

A0A803Q8J4 Uncharacterized protein4.0e-0734.19Show/hide
Query:  DYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSK-IKGRSHSYQINLKA--SRGENPSSQGIWNPPPPLCWKLNVDAS
        D+   +++N +  EL      MWSIW  RNN ++  +  QP       +I+ K    +     + Q++L A  S    PS    W+PPPP C KLNVDA+
Subjt:  DYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNNPNIIQPDKNKLINLIAGKLSK-IKGRSHSYQINLKA--SRGENPSSQGIWNPPPPLCWKLNVDAS

Query:  WNLLEDRGGLGWIVRDS
        ++   ++ G G I+RDS
Subjt:  WNLLEDRGGLGWIVRDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.6e-0622.84Show/hide
Query:  LFLCALKMPHWELIP-PLHGEASIGVDLFLKGYREHWLTLDYWDWLNQNLSSKELG-VSMILMWSIW---------IFRNNNLNNPNIIQPDKNKLINLI
        LF C      W + P P + E      L+   Y   W+       LN  +   +LG +  ++ W +W         +F+    + P +++          
Subjt:  LFLCALKMPHWELIP-PLHGEASIGVDLFLKGYREHWLTLDYWDWLNQNLSSKELG-VSMILMWSIW---------IFRNNNLNNPNIIQPDKNKLINLI

Query:  AGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVRDSGVGQLSGMLLFKHCPKEKNRVAHSIE--RGGVGLTR
          +  +++G++   Q+        N S Q  W  PP    K N DA+W L   R G+GWI+R+   G L   +  +  P+ KN +   +E  R  V    
Subjt:  AGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVRDSGVGQLSGMLLFKHCPKEKNRVAHSIE--RGGVGLTR

Query:  HTNFYNL-----GQRLPSTLEGEGRFWTSVYP
          N+  +      Q L + L  +  FW ++ P
Subjt:  HTNFYNL-----GQRLPSTLEGEGRFWTSVYP

AT4G29090.1 Ribonuclease H-like superfamily protein3.3e-0626.28Show/hide
Query:  LFLCALKMPHWEL--IP-PLHGEASIGVDLFLKGYREHWLTLDYWDWLNQNLSSKELGVSMILMWSIW-IFRNNNLNNPNIIQPDKNKLINLIAGKLSKI
        LF C      W +  IP PL GE +  + + L           YW +   N + +    S ++ W +W +++N N       + +  +++      L + 
Subjt:  LFLCALKMPHWEL--IP-PLHGEASIGVDLFLKGYREHWLTLDYWDWLNQNLSSKELGVSMILMWSIW-IFRNNNLNNPNIIQPDKNKLINLIAGKLSKI

Query:  KGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVRD
        + R+ +     K     N SS G W PPP    K N DA+WN   +R G+GW++R+
Subjt:  KGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTGTATTTCCACAGTGTCTTGTTCAATGCTTGTCAGTGGGTACCCGAGCAAGGATTTTAAGCCTAGCAGGGGGATCAGACAAGGGGATCTGTTGTCCCCTTACCT
CTTTCTCTGTGCGCTGAAGATGCCTCATTGGGAACTAATCCCTCCCTTACATGGAGAAGCATCAATTGGGGTAGACTTGTTCCTAAAAGGCTACAGGGAGCATTGGTTGA
CATTAGACTACTGGGATTGGCTTAATCAAAACCTTAGTTCAAAGGAGCTAGGGGTCTCGATGATTCTTATGTGGAGCATTTGGATTTTCAGAAACAACAATCTCAACAAT
CCCAATATAATTCAGCCAGACAAGAACAAATTGATCAACCTAATTGCTGGAAAGTTAAGCAAAATCAAAGGGAGAAGCCACTCGTACCAAATCAATCTAAAAGCTTCACG
AGGCGAGAACCCCTCGAGTCAGGGTATCTGGAACCCTCCGCCGCCCCTTTGCTGGAAACTAAACGTTGATGCCTCGTGGAACTTGTTAGAAGACAGAGGTGGGCTGGGTT
GGATTGTTCGTGACTCTGGAGTTGGCCAACTCTCGGGGATGCTTCTCTTCAAGCATTGCCCTAAAGAGAAAAATCGTGTTGCTCACTCAATCGAGCGCGGAGGTGTTGGT
CTTACCCGCCATACCAATTTTTATAATTTGGGGCAGAGGCTTCCTTCCACGCTGGAAGGTGAAGGTCGTTTTTGGACCTCTGTTTACCCGCTGTTTCTTTCTTCAATTTG
TGTAGAGGATTTCTGTATTCAGTCGTTTTCATTTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTGTATTTCCACAGTGTCTTGTTCAATGCTTGTCAGTGGGTACCCGAGCAAGGATTTTAAGCCTAGCAGGGGGATCAGACAAGGGGATCTGTTGTCCCCTTACCT
CTTTCTCTGTGCGCTGAAGATGCCTCATTGGGAACTAATCCCTCCCTTACATGGAGAAGCATCAATTGGGGTAGACTTGTTCCTAAAAGGCTACAGGGAGCATTGGTTGA
CATTAGACTACTGGGATTGGCTTAATCAAAACCTTAGTTCAAAGGAGCTAGGGGTCTCGATGATTCTTATGTGGAGCATTTGGATTTTCAGAAACAACAATCTCAACAAT
CCCAATATAATTCAGCCAGACAAGAACAAATTGATCAACCTAATTGCTGGAAAGTTAAGCAAAATCAAAGGGAGAAGCCACTCGTACCAAATCAATCTAAAAGCTTCACG
AGGCGAGAACCCCTCGAGTCAGGGTATCTGGAACCCTCCGCCGCCCCTTTGCTGGAAACTAAACGTTGATGCCTCGTGGAACTTGTTAGAAGACAGAGGTGGGCTGGGTT
GGATTGTTCGTGACTCTGGAGTTGGCCAACTCTCGGGGATGCTTCTCTTCAAGCATTGCCCTAAAGAGAAAAATCGTGTTGCTCACTCAATCGAGCGCGGAGGTGTTGGT
CTTACCCGCCATACCAATTTTTATAATTTGGGGCAGAGGCTTCCTTCCACGCTGGAAGGTGAAGGTCGTTTTTGGACCTCTGTTTACCCGCTGTTTCTTTCTTCAATTTG
TGTAGAGGATTTCTGTATTCAGTCGTTTTCATTTTCGTGA
Protein sequenceShow/hide protein sequence
MSCISTVSCSMLVSGYPSKDFKPSRGIRQGDLLSPYLFLCALKMPHWELIPPLHGEASIGVDLFLKGYREHWLTLDYWDWLNQNLSSKELGVSMILMWSIWIFRNNNLNN
PNIIQPDKNKLINLIAGKLSKIKGRSHSYQINLKASRGENPSSQGIWNPPPPLCWKLNVDASWNLLEDRGGLGWIVRDSGVGQLSGMLLFKHCPKEKNRVAHSIERGGVG
LTRHTNFYNLGQRLPSTLEGEGRFWTSVYPLFLSSICVEDFCIQSFSFS