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Lag0006191 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006191
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:38898893..38900331
RNA-Seq ExpressionLag0006191
SyntenyLag0006191
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48734.1 hypothetical protein EZV62_024609 [Acer yangbiense]8.6e-1037.33Show/hide
Query:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFP
        L  CL+GK+ +++ +  +V +++    W+V + + +E++ +N+F+F F N++DR+RVL  GPW FD FL++L+ P
Subjt:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFP

TXG62353.1 hypothetical protein EZV62_013716 [Acer yangbiense]1.7e-1040Show/hide
Query:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFP
        L  CL+GK+ ++  +  +V R++    W+V + + +E++ +N+F F F N++DRRRVL +GPW FD FL++L  P
Subjt:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFP

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]6.0e-1144.58Show/hide
Query:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSD
        L   L+GKL + R ++A V+ ++   AW+V   L VE +GKNLF+F F  E D  RV+K GPWFFDK L++L+ P   +  S+
Subjt:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSD

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.5e-0942.86Show/hide
Query:  CLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSDYGLS
        CL+GKL + R    + M+    S WQ  +G++V ++G NLF+F F +  D+RRVL  GPW FDK LL+L       +PSD  L+
Subjt:  CLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSDYGLS

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]1.5e-0942.86Show/hide
Query:  CLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSDYGLS
        CL+GKL + R    + M+    S WQ  +G++V ++G NLF+F F +  D+RRVL  GPW FDK LL+L       +PSD  L+
Subjt:  CLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSDYGLS

TrEMBL top hitse value%identityAlignment
A0A1Q3BBD8 DUF4283 domain-containing protein (Fragment)4.6e-0938.55Show/hide
Query:  CLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSDYGL
        CL+G L   ++   +V++    S W+   GL++  +G NLF+F F+N++DR RVLK  PW FDK +L+ E   +  +PS   L
Subjt:  CLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSDYGL

A0A1R3GTB5 Reverse transcriptase4.6e-0945.71Show/hide
Query:  CLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILE
        CL+GKL S R +  +VMR +    W++A GL+V  +G+NLFIF+F+++ ++ RV +Q PW F+K LL+L+
Subjt:  CLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILE

A0A5C7GVA6 CCHC-type domain-containing protein4.2e-1037.33Show/hide
Query:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFP
        L  CL+GK+ +++ +  +V +++    W+V + + +E++ +N+F+F F N++DR+RVL  GPW FD FL++L+ P
Subjt:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFP

A0A5C7HYU7 CCHC-type domain-containing protein8.4e-1140Show/hide
Query:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFP
        L  CL+GK+ ++  +  +V R++    W+V + + +E++ +N+F F F N++DRRRVL +GPW FD FL++L  P
Subjt:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFP

A0A6J1DU55 uncharacterized protein LOC1110231352.9e-1144.58Show/hide
Query:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSD
        L   L+GKL + R ++A V+ ++   AW+V   L VE +GKNLF+F F  E D  RV+K GPWFFDK L++L+ P   +  S+
Subjt:  LGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGATGTTGTTTATTGGGAAAATTGCAATCCCATCGTTTCCTAGCAGCGCAAGTTATGCGCAAGATCTTTGCATCGGCGTGGCAAGTCGCTCAAGGTCTTCGAGT
GGAATTGCTAGGTAAAAATTTGTTCATTTTCAGGTTTGACAATGAGGATGACAGAAGGCGGGTCTTGAAACAAGGTCCTTGGTTTTTTGACAAATTTCTCTTGATTTTGG
AGTTTCCGATTAGAGGGCAAAAGCCTTCAGACTATGGACTCTCGCTGGACTGTGGCCAGTTTTATTCATCGGATAGATCACACAGTGTGGTGCTAAATTACGGTGAGTGG
CTTCGTTTTGATTCCAAAGGAGTGGTTTTGGCAAGCTTACTGGTGCCGGATGTGATGTTGGAGCACTACAATATTCCAATTTTTGGTAATGTCCCTGTGGCGGCTCCGTT
ATTCGAATCATTCACTAAGCACAAACTCTCGACATGTATCTCTATTTCTAGCCATCCTGATCAGGTTCAAATCCCAAACCCAAGTCGTTCTCACGGTACATCGTCGAAAG
GAGCGGCATGGTATTCTTTGTCTGGCGTTATTCATCCTTCGGAAAAAGGGAAAGCTAAAATGGTTGAAGATGTTCATGATTTTCATATGAACAGTTGGAACAATATCAGA
AATCATAGTTGGAAGGCTTCCTCTTCAGTCCAATCTCAGTTTCCGGCGAGCGATTTTTCAGATCTAGTGGTCTCGTTGCAGCCGGCGGTTACTCAGAAGGAGACGTTACG
CTTTGGAACCCTTGATTTCCTGGAGCATTATCAACGCAAATTAAAGGATTTTAATGCAGGTTTTAATGAGAGGTTTAATTCTCCAGTGGTTTCGGATTTCCAACTAAATA
ATTCATCCAACGCCTCTGATCGCAATCTGAAACCTCCTATAGGTGTTGGGCCGGTTTCATTGGAGAGTGGGCCCACTATTAACACAGCAGATTTGCTTCCAAAAGTCCAA
TGTAAAAAGAAATTGGATCTGGAGAATGTAACACATGGCGGCCCAAATTCAAAGGAGGAGCAGGATTCGAAATTTGAAAGTTTGGAAGGTGTGGGTCTTCGGATTGGCTT
GAAGAAAGATGAGCCTATGGACTTATCTTCAAAGAACAAAGCTTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGATGTTGTTTATTGGGAAAATTGCAATCCCATCGTTTCCTAGCAGCGCAAGTTATGCGCAAGATCTTTGCATCGGCGTGGCAAGTCGCTCAAGGTCTTCGAGT
GGAATTGCTAGGTAAAAATTTGTTCATTTTCAGGTTTGACAATGAGGATGACAGAAGGCGGGTCTTGAAACAAGGTCCTTGGTTTTTTGACAAATTTCTCTTGATTTTGG
AGTTTCCGATTAGAGGGCAAAAGCCTTCAGACTATGGACTCTCGCTGGACTGTGGCCAGTTTTATTCATCGGATAGATCACACAGTGTGGTGCTAAATTACGGTGAGTGG
CTTCGTTTTGATTCCAAAGGAGTGGTTTTGGCAAGCTTACTGGTGCCGGATGTGATGTTGGAGCACTACAATATTCCAATTTTTGGTAATGTCCCTGTGGCGGCTCCGTT
ATTCGAATCATTCACTAAGCACAAACTCTCGACATGTATCTCTATTTCTAGCCATCCTGATCAGGTTCAAATCCCAAACCCAAGTCGTTCTCACGGTACATCGTCGAAAG
GAGCGGCATGGTATTCTTTGTCTGGCGTTATTCATCCTTCGGAAAAAGGGAAAGCTAAAATGGTTGAAGATGTTCATGATTTTCATATGAACAGTTGGAACAATATCAGA
AATCATAGTTGGAAGGCTTCCTCTTCAGTCCAATCTCAGTTTCCGGCGAGCGATTTTTCAGATCTAGTGGTCTCGTTGCAGCCGGCGGTTACTCAGAAGGAGACGTTACG
CTTTGGAACCCTTGATTTCCTGGAGCATTATCAACGCAAATTAAAGGATTTTAATGCAGGTTTTAATGAGAGGTTTAATTCTCCAGTGGTTTCGGATTTCCAACTAAATA
ATTCATCCAACGCCTCTGATCGCAATCTGAAACCTCCTATAGGTGTTGGGCCGGTTTCATTGGAGAGTGGGCCCACTATTAACACAGCAGATTTGCTTCCAAAAGTCCAA
TGTAAAAAGAAATTGGATCTGGAGAATGTAACACATGGCGGCCCAAATTCAAAGGAGGAGCAGGATTCGAAATTTGAAAGTTTGGAAGGTGTGGGTCTTCGGATTGGCTT
GAAGAAAGATGAGCCTATGGACTTATCTTCAAAGAACAAAGCTTGCTAG
Protein sequenceShow/hide protein sequence
MLGCCLLGKLQSHRFLAAQVMRKIFASAWQVAQGLRVELLGKNLFIFRFDNEDDRRRVLKQGPWFFDKFLLILEFPIRGQKPSDYGLSLDCGQFYSSDRSHSVVLNYGEW
LRFDSKGVVLASLLVPDVMLEHYNIPIFGNVPVAAPLFESFTKHKLSTCISISSHPDQVQIPNPSRSHGTSSKGAAWYSLSGVIHPSEKGKAKMVEDVHDFHMNSWNNIR
NHSWKASSSVQSQFPASDFSDLVVSLQPAVTQKETLRFGTLDFLEHYQRKLKDFNAGFNERFNSPVVSDFQLNNSSNASDRNLKPPIGVGPVSLESGPTINTADLLPKVQ
CKKKLDLENVTHGGPNSKEEQDSKFESLEGVGLRIGLKKDEPMDLSSKNKAC