; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006192 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006192
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:38900982..38901620
RNA-Seq ExpressionLag0006192
SyntenyLag0006192
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]6.9e-2536.54Show/hide
Query:  MRLIQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGF--HNRHNQGKAFRFEELWSK
        M  + +F++ LD C L DL F+G  FTW N+RQ G  V  RLDRY  N  +   FP   V N D++ S+H+PI   LE      R+++ + FRFE  W K
Subjt:  MRLIQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGF--HNRHNQGKAFRFEELWSK

Query:  DEECLHIISRTGKWSD-PGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKVEYDRPLPIDFTV-----VHRLERQLDNLLLEEEMYWKQRS
        D EC  II+R+    D P +   +L      CA  L  W    NK+++ ++ +   + + + D  L +   +     V R+E +L++LL  EE YWK RS
Subjt:  DEECLHIISRTGKWSD-PGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKVEYDRPLPIDFTV-----VHRLERQLDNLLLEEEMYWKQRS

Query:  RENWLKWG
        R  WL  G
Subjt:  RENWLKWG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.9e-2535.53Show/hide
Query:  IQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEECL
        I+ FR+ +D C L D+ FKGGIFTWCN R AGDQ+  RLDR++ N  F   FPD                                              
Subjt:  IQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEECL

Query:  HIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKWG
             +G WS+  + N +    +Q  + AL+ WG       +  I   K  I   Y++PLP+DFT++H LE  L  LL  EE++WKQRSRE+WLKWG
Subjt:  HIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKWG

XP_022158772.1 uncharacterized protein LOC111025237 [Momordica charantia]4.8e-2635.71Show/hide
Query:  FRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRH--NQGKAFRFEELWSKDEECLH
        FR+ +D+C L D+ F GG FTWCN R AGDQ+   LDR++ N +F   FPD  + +L W KS+H+ I L L    +       K  RFEE W ++ EC  
Subjt:  FRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRH--NQGKAFRFEELWSKDEECLH

Query:  IISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKWG
        +IS                                                      PLP+DFT++H +E  L  LL  EE++WKQRSRE+WLKWG
Subjt:  IISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKWG

XP_030923315.1 uncharacterized protein LOC115950217 [Quercus lobata]8.1e-2636.68Show/hide
Query:  IQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEECL
        +++FRD LD CG  DL + G  FTWCN  + G  V  RLDR V  + +L  FP   V +L+   S+HKPI + L G   R N  K +RFE++W KDE C 
Subjt:  IQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEECL

Query:  HIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIK-----VEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWL
         +I     +   G+    +  K+++C K LK W    +K  + N+ +   K K      E +      F+ V RL++++  LL+ EE  W+QRSR  WL
Subjt:  HIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIK-----VEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWL

XP_030940268.1 uncharacterized protein LOC115965235 [Quercus lobata]5.3e-2535.32Show/hide
Query:  RLIQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNR-HNQGKAFRFEELWSKDE
        R +Q FRD LD+CG  D+ F G  FTWCN R  G  V +RLDR +A++ +++ FP   +++L    S+HKPI LC +  H R +   K FRFEE+W KDE
Subjt:  RLIQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNR-HNQGKAFRFEELWSKDE

Query:  ECLHIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRK-NKARWTNICQVKDKIKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKW
         C  +++     S   +    +  K+  C   LK W        R T + + K   K E       +   V  L+ +++ LL  EE  W QR++ +WL++
Subjt:  ECLHIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRK-NKARWTNICQVKDKIKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKW

Query:  G
        G
Subjt:  G

TrEMBL top hitse value%identityAlignment
A0A2N9FCL2 Reverse transcriptase domain-containing protein1.9e-2835.78Show/hide
Query:  RLIQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEE
        R +Q FR  +D CG +DL F+G  FTWCN R+      LRLDR++A + +++ F   +V++L+   S+HKPI L     +    + + FRFE++W  D  
Subjt:  RLIQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEE

Query:  CLHIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQ-VKDKI----KVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENW
        C  +I+R       GS    +  K+Q+C  AL  W    +++++ NI + +K+K     + E D  L +    V  + R++++LLL+EE  WKQRSR++W
Subjt:  CLHIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQ-VKDKI----KVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENW

Query:  LKWG
        LK G
Subjt:  LKWG

A0A2N9G219 RNase H domain-containing protein7.9e-2736.32Show/hide
Query:  RLIQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEE
        R +Q FR  +D CG LDL F+G  FTWCN R+      LRLDR++A + +++ F   +V++L+   S+HKPI L  +       + K FRFE++W  D  
Subjt:  RLIQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEE

Query:  CLHIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDK--IKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKW
        C   I++       GS       K+Q C  AL  W  RK     T + + K +   + E D         V  + +++ +LLL+EE  WKQRSRE+WLK 
Subjt:  CLHIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDK--IKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKW

Query:  G
        G
Subjt:  G

A0A2N9IP69 Reverse transcriptase domain-containing protein1.8e-2634.34Show/hide
Query:  IQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEECL
        +Q FRD +D CG +DL ++G  FTWCN R+      LRLDRY+A + +++ F   +V +L+   SNHKPI L      N  ++ K FRFE++W  +  C 
Subjt:  IQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEECL

Query:  HIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKV-EYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKWG
        + I+   K  D G+    +  K+Q+C+  L  W      +  T + +  + +K+ E +         V  L ++++ LL++EE  W+QRSR  WLK G
Subjt:  HIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKV-EYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKWG

A0A2N9J109 Uncharacterized protein5.0e-2939.11Show/hide
Query:  IQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEECL
        +Q FRD LD CG +DL + G  FTWCN R +G  V  RLD+ VA S +L  FP   V +LD+  S+HKP+ L  +  HN     K F FEE+W  D  C 
Subjt:  IQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEECL

Query:  HIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNI-CQVKDK---IKVEYDRPLPIDFTV-VHRLERQLDNLLLEEEMYWKQRSRENWLK
          I+ + K S  G+    +  KL  C K LK W    +K+ + +I  Q++DK   +K+  +  +  + +V +H L +++  LL +EE  W+QRSR  WLK
Subjt:  HIISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNI-CQVKDK---IKVEYDRPLPIDFTV-VHRLERQLDNLLLEEEMYWKQRSRENWLK

Query:  WG
        +G
Subjt:  WG

A0A6J1DY29 uncharacterized protein LOC1110252372.3e-2635.71Show/hide
Query:  FRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRH--NQGKAFRFEELWSKDEECLH
        FR+ +D+C L D+ F GG FTWCN R AGDQ+   LDR++ N +F   FPD  + +L W KS+H+ I L L    +       K  RFEE W ++ EC  
Subjt:  FRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRH--NQGKAFRFEELWSKDEECLH

Query:  IISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKWG
        +IS                                                      PLP+DFT++H +E  L  LL  EE++WKQRSRE+WLKWG
Subjt:  IISRTGKWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTTTAATTCAAGACTTTCGTGATACTCTGGATTATTGTGGTCTTTTGGATCTGAAATTCAAAGGCGGAATATTTACTTGGTGTAACCGGCGACAAGCAGGAGATCA
AGTTAGTCTTCGCCTGGATCGTTACGTGGCAAACTCTGCTTTCTTGGTTTGCTTTCCAGATTGTCTTGTCAATAATCTTGATTGGGTTAAGTCGAACCACAAGCCAATTG
AACTATGTCTGGAAGGATTCCATAACAGGCATAATCAGGGGAAGGCGTTTAGATTCGAGGAATTGTGGTCCAAAGATGAAGAATGTCTCCATATTATTTCTCGGACAGGG
AAATGGTCGGATCCGGGAAGTAGAAATCAAGCTCTCCATCCGAAGTTGCAAAAGTGTGCGAAAGCGCTAAAAGATTGGGGTTACAGGAAGAACAAGGCCAGATGGACTAA
CATCTGTCAGGTTAAGGACAAAATTAAAGTAGAATATGATAGGCCTTTACCAATTGATTTCACAGTTGTGCATCGTCTCGAGCGTCAACTGGATAATTTATTACTTGAGG
AGGAAATGTATTGGAAACAGCGTTCGCGTGAGAATTGGCTAAAATGGGGGACCACAACACAAATGGTTCCATCACCAAGCATCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGTTTAATTCAAGACTTTCGTGATACTCTGGATTATTGTGGTCTTTTGGATCTGAAATTCAAAGGCGGAATATTTACTTGGTGTAACCGGCGACAAGCAGGAGATCA
AGTTAGTCTTCGCCTGGATCGTTACGTGGCAAACTCTGCTTTCTTGGTTTGCTTTCCAGATTGTCTTGTCAATAATCTTGATTGGGTTAAGTCGAACCACAAGCCAATTG
AACTATGTCTGGAAGGATTCCATAACAGGCATAATCAGGGGAAGGCGTTTAGATTCGAGGAATTGTGGTCCAAAGATGAAGAATGTCTCCATATTATTTCTCGGACAGGG
AAATGGTCGGATCCGGGAAGTAGAAATCAAGCTCTCCATCCGAAGTTGCAAAAGTGTGCGAAAGCGCTAAAAGATTGGGGTTACAGGAAGAACAAGGCCAGATGGACTAA
CATCTGTCAGGTTAAGGACAAAATTAAAGTAGAATATGATAGGCCTTTACCAATTGATTTCACAGTTGTGCATCGTCTCGAGCGTCAACTGGATAATTTATTACTTGAGG
AGGAAATGTATTGGAAACAGCGTTCGCGTGAGAATTGGCTAAAATGGGGGACCACAACACAAATGGTTCCATCACCAAGCATCTTATAG
Protein sequenceShow/hide protein sequence
MRLIQDFRDTLDYCGLLDLKFKGGIFTWCNRRQAGDQVSLRLDRYVANSAFLVCFPDCLVNNLDWVKSNHKPIELCLEGFHNRHNQGKAFRFEELWSKDEECLHIISRTG
KWSDPGSRNQALHPKLQKCAKALKDWGYRKNKARWTNICQVKDKIKVEYDRPLPIDFTVVHRLERQLDNLLLEEEMYWKQRSRENWLKWGTTTQMVPSPSIL