; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006194 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006194
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:38904729..38906304
RNA-Seq ExpressionLag0006194
SyntenyLag0006194
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]9.5e-6335.81Show/hide
Query:  GNARRNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSF
        G  RR  ++G+ ++  +P ++HL FADDS++F+KA+ ++    + +   YE  +GQ IN  KS +  S N        +  ++ +  V    +YLGLP+ 
Subjt:  GNARRNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSF

Query:  FQCSKGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFR
            + +  + + D++W ++ GWK+   S  GKEI         PTY+MSCFR+PKGL   ++ + ARFWW+    K+ IHW KW+ LCK K  GGL FR
Subjt:  FQCSKGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFR

Query:  DLEVFNQAMLAK---------TSLASPDF-ARVHDG----------------KSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDL
        DLE FNQA+LAK          SL +  F AR H                  +S  WG  LL  G+R + G G  +++  D W+P P  FK++      L
Subjt:  DLEVFNQAMLAK---------TSLASPDF-ARVHDG----------------KSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDL

Query:  ELKVANCILSSGQWDIPKLSQFLLDEDVQEIIRLPI-SLSIPDRWIWHFDKFGCYTVKSNYKL
          +V +   SSGQW++P L     D++V  I+++P+ SL+  D  IWH+++ G Y+VKS Y+L
Subjt:  ELKVANCILSSGQWDIPKLSQFLLDEDVQEIIRLPI-SLSIPDRWIWHFDKFGCYTVKSNYKL

VVA38592.1 PREDICTED: reverse mRNAase, partial [Prunus dulcis]4.1e-6639.39Show/hide
Query:  RRNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQC
        R+ ++ GI +   +P +SHLFFADDS +F KA+    G  K I   YE ASGQ IN  KS + FS N+  D++S L+S++ +  V +  +YLGLP     
Subjt:  RRNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQC

Query:  SKGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLE
        +K    + + +RVW  LQGW++   S  GKE+         P Y MSCF LP+GL   I  + ARFWW      ++IHW +W+ LCK K +GG+ FR L+
Subjt:  SKGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLE

Query:  VFNQAMLAKT---------SLAS----------PDF--ARVHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLE-L
         FN AMLAK          SLAS           +F  A +    S VW        +L+ G R Q GDGK VRI  D W+PRP TF VI      +E  
Subjt:  VFNQAMLAKT---------SLAS----------PDF--ARVHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLE-L

Query:  KVANCILSSG--QWDIPKLSQFLLDEDVQEIIRLPISL-SIPDRWIWHFDKFGCYTVKSNYKLVWTTMGYRDMVKSKFIMDIQDRWINISN-NVST
        KV+  I + G  QWD+ KL+   L  DV +I+R+P+S+ + PDR +W++DK G +TVKS Y++        +   S    D    W +I N NV T
Subjt:  KVANCILSSG--QWDIPKLSQFLLDEDVQEIIRLPISL-SIPDRWIWHFDKFGCYTVKSNYKLVWTTMGYRDMVKSKFIMDIQDRWINISN-NVST

XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]9.5e-6339.44Show/hide
Query:  RNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCS
        R+ I+G+ ++  +P ISHLFFADDSL+FLKAS       + I S Y   SGQ IN +KS + FS N   D +S     + M+    + +YLGLP     +
Subjt:  RNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCS

Query:  KGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEV
        K    + I ++VW+ L  W+ + FS GGKEI         PTY MSCF++P+G    I  L AR+WW S  SK++IHW+ W  +  PK +GGL FR    
Subjt:  KGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEV

Query:  FNQAMLAK---------TSL----------ASPDFARVHDG-------KSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKV
        +NQA+LAK         TSL          AS  F    +G       +S VWG  LL  G+RR+ G+G+  R  +DPW+ RP +F  I  +  + E+KV
Subjt:  FNQAMLAK---------TSL----------ASPDFARVHDG-------KSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKV

Query:  ANCILSSGQWDIPKLSQFLLDEDVQEIIRLPIS-LSIPDRWIWHFDKFGCYTVKSNYKLV
           I + G W+   + Q  L  D+Q I+ +P+S     D W WH++  G YTVKS YKLV
Subjt:  ANCILSSGQWDIPKLSQFLLDEDVQEIIRLPIS-LSIPDRWIWHFDKFGCYTVKSNYKLV

XP_024172304.2 uncharacterized protein LOC112178381 [Rosa chinensis]3.3e-6336.91Show/hide
Query:  RNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCS
        ++R+ GIA++  +P I+HLFFADDS +F+KA  EE    K I+  YE ASGQ +N  KS+I FSKNV    +  L+ +  ++ V     YLGLP+    S
Subjt:  RNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCS

Query:  KGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEV
        K +  + I+++  + ++ WK    S  GKE+         PTY MSCF LPK L   +    A FWW  ++  ++IHW  W  +C PKE+GGL FR++E 
Subjt:  KGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEV

Query:  FNQAMLAKTS---LASPD------------------FARVHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLE-LK
        FNQA+LAK     L  PD                   A V+ G S+ W     G  LL+ G+R Q G G  + +  DPWIPRPY+F+        LE L 
Subjt:  FNQAMLAKTS---LASPD------------------FARVHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLE-LK

Query:  VANCI-LSSGQWDIPKLSQFLLDEDVQEIIRLPISLSIP-DRWIWHFDKFGCYTVKSNYKLVWTTMGYRDMVKSKFIMDIQDRWINISNNVSTMDSNGFV
        VA+ I   S  W +  L +    ++V  I ++P+SL  P DR IWHFDK G Y+VKS Y +          V +      +D W  + +         FV
Subjt:  VANCI-LSSGQWDIPKLSQFLLDEDVQEIIRLPISLSIP-DRWIWHFDKFGCYTVKSNYKLVWTTMGYRDMVKSKFIMDIQDRWINISNNVSTMDSNGFV

Query:  W
        W
Subjt:  W

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]1.9e-6339.04Show/hide
Query:  IMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCSKGK
        + G+ +S ++P I+HL FADDS++F +AS        + +  Y  ASGQ +N +KS + FS N  T  + +   ++ M        YLGLPSF    K +
Subjt:  IMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCSKGK

Query:  DSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVFNQ
           GI D++W  +  W++  FS GGKE+         PTY MSCF+LP  L + I  L +RFWW  + +   IHWK WK LCK K  GG+ FR+   FNQ
Subjt:  DSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVFNQ

Query:  AMLAKTS---LASPD--FARVHDG---------------------KSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKVANC
        A+LAK +   L  P    ARV                        KS VWG  LL  G+R + G G  V  +  PWIP P  FK + + + D ++KVA+ 
Subjt:  AMLAKTS---LASPD--FARVHDG---------------------KSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKVANC

Query:  ILSSGQWDIPKLSQFLLDEDVQEIIRLPISL-SIPDRWIWHFDKFGCYTVKSNYKL
        I  S QWD+PKL QF    DV  I+ +P+SL    D  +WH+   G YTVKS YKL
Subjt:  ILSSGQWDIPKLSQFLLDEDVQEIIRLPISL-SIPDRWIWHFDKFGCYTVKSNYKL

TrEMBL top hitse value%identityAlignment
A0A803PM68 Uncharacterized protein4.6e-7141.74Show/hide
Query:  KISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCSKGKDSKGILDRVWS
        ++SHLFFADDSL+FL+A+  E  +F+ ++  Y  ASGQ +N  KS++CF + V    KS L++++ +K V N G YLGLPSF   +K +  + I  +VW+
Subjt:  KISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCSKGKDSKGILDRVWS

Query:  YLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVFNQAMLAK------
         L+GWK +FFS+ GKEI         PTYTMSCFRLPK  +++I ++ ARFWW S++   +IHW KW  LCK KEQGGL FRDL +FNQA+LAK      
Subjt:  YLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVFNQAMLAK------

Query:  ---TSLAS--------PDFARVHD---------GKSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKVANCILSSGQWDIPK
            SL S        P+   +            +S VWG  +++ G R + G+G  VR+LEDPW+PRP TFKV    +    + V + +  +G+WD   
Subjt:  ---TSLAS--------PDFARVHD---------GKSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKVANCILSSGQWDIPK

Query:  LSQFLLDEDVQEIIRLPIS-LSIPDRWIWHFDKFGCYTVKSNYKL
        +  F    D + I+ +P S   I D+ +WH+ K G Y+V+S Y++
Subjt:  LSQFLLDEDVQEIIRLPIS-LSIPDRWIWHFDKFGCYTVKSNYKL

A0A803PV25 Uncharacterized protein2.8e-6838.89Show/hide
Query:  RRNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQC
        ++ R+ G+        +SHLFFADDSL+FL A+ +E   F+ ++  Y  ASGQ +N  KS++CF ++V    +++L++ + +K V N G YLGLPSF   
Subjt:  RRNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQC

Query:  SKGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLE
        +K K     +++VW+ L+GWK +FFS+ GKE+         PTYTMSCFRLPK  +++I ++ ARFWW S++   +IHW KW  LCK KEQGGL FRDL 
Subjt:  SKGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLE

Query:  VFNQAMLAK---------TSLAS--------PDFARVHD---------GKSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELK
        +FNQA+LAK          SL S        P+   +            +S VWG  +++ G R + G+G  VR+L+DPW+PRP TFK+         L 
Subjt:  VFNQAMLAK---------TSLAS--------PDFARVHD---------GKSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELK

Query:  VANCILSSGQWDIPKLSQFLLDEDVQEIIRLPIS-LSIPDRWIWHFDKFGCYTVKSNYKL
        V +    +G+WD   +       D + I+++  S   I D+ +WH+ K G Y+V+S Y++
Subjt:  VANCILSSGQWDIPKLSQFLLDEDVQEIIRLPIS-LSIPDRWIWHFDKFGCYTVKSNYKL

A0A803Q154 Uncharacterized protein4.2e-7242.3Show/hide
Query:  RIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCSKG
        R  G++      ++SHLFFADDSL+F  AS  E G FK ++  Y  ASGQ++N  KS++CF   V    +S L++++ +K V N G YLGLPSFF  SK 
Subjt:  RIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCSKG

Query:  KDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVFN
        +  + I +RVW  ++GWK + FS  GKE+         P YTMSCF+LPK  + ++ ++ ARFWW S+  +K++HW KW  +CKPKE+GGL FRDL +FN
Subjt:  KDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVFN

Query:  QAMLAK---TSLASPDF-------------ARVHDGK----------SFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKVAN
        QA+LAK     L SP                 V D K          S +WG  LL  G R + GDG  VR+L DPW+PRP TF V     F  EL V +
Subjt:  QAMLAK---TSLASPDF-------------ARVHDGK----------SFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKVAN

Query:  CILSSGQWDIPKLSQFLLDEDVQEIIRLPI-SLSIPDRWIWHFDKFGCYTVKSNYKL
          L+ G WD   +     +ED + I+ LP  S  + D+ +WH+ K G YTV+S Y+L
Subjt:  CILSSGQWDIPKLSQFLLDEDVQEIIRLPI-SLSIPDRWIWHFDKFGCYTVKSNYKL

A0A803Q1K6 Uncharacterized protein1.7e-7040Show/hide
Query:  RRNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQC
        R  R+ GI        ISHLFFAD SLIF+ A+ +    F+ ++S Y  ASGQ +N  KS+ CF +NV  + +S L+ I+ ++ V N G YLGLPSF   
Subjt:  RRNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQC

Query:  SKGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLE
        +K +    I ++VW+ ++GWK + FS  GKE+         PTYTMSCF+LPK  + ++  + +RFWW S+D +K+IHW KW+ LC+PK++GGL FRDL 
Subjt:  SKGKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLE

Query:  VFNQAMLAK---TSLASPDF--ARV---------------------HDGKSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELK
        +FNQA+LAK     L  P    +RV                        +S VWG  L+  G R + G+G+ VR+LEDPW+PRP TFKV    +    L 
Subjt:  VFNQAMLAK---TSLASPDF--ARV---------------------HDGKSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELK

Query:  VANCILSSGQWDIPKLSQFLLDEDVQEIIRLPIS-LSIPDRWIWHFDKFGCYTVKSNYKL
        V +  ++ GQWD   +       D   I+ +P S     D+ +WH+ K G Y+VKS Y++
Subjt:  VANCILSSGQWDIPKLSQFLLDEDVQEIIRLPIS-LSIPDRWIWHFDKFGCYTVKSNYKL

A0A803QJV0 Uncharacterized protein1.1e-6737.66Show/hide
Query:  NRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCSK
        N+++ +        +SHLFFADDS+IF  A+ E    F  ++S Y  ASGQ +N  KS++CF KNV   +K  L+  + +K V N G YLGL S    +K
Subjt:  NRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCSK

Query:  GKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVF
         +    I +RVW+ L+GWK + FS GG E+         P YTMS +RL K  + +I  + ARFWW ST  KK+IHW KWK LC+PKE+GGL FRDLE+F
Subjt:  GKDSKGILDRVWSYLQGWKKNFFSSGGKEIF-------SPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVF

Query:  NQAMLAK-------------TSLASPDF----------ARVHDG---KSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKVA
        NQA+LAK             T +    +             H     +S VWG  ++  G R + G+G+ VR+LEDPW+PRP +FKV     F  +L V 
Subjt:  NQAMLAK-------------TSLASPDF----------ARVHDG---KSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKVA

Query:  NCILSSGQWDIPKLSQFLLDEDVQEIIRL-PISLSIPDRWIWHFDKFGCYTVKSNYKLVWTTMGYRDMVKSKFIMD---IQDRWINISNNVSTMDSNGFV
        +    SG WD   +      ED + I+RL P+   + D+ +WH+ + G YTV+S Y++        +M KS+   +   ++D W  +     +     FV
Subjt:  NCILSSGQWDIPKLSQFLLDEDVQEIIRL-PISLSIPDRWIWHFDKFGCYTVKSNYKLVWTTMGYRDMVKSKFIMD---IQDRWINISNNVSTMDSNGFV

Query:  W
        W
Subjt:  W

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003102.5e-1838.3Show/hide
Query:  PTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKE-QGGLNFRDLEVFNQAMLAKTSL---------------------ASPDFAR
        P Y MSCFRL K L   +++    FWWSS ++K++I W  W+ LCK KE  GGL FRDL  FNQA+LAK S                      +S     
Subjt:  PTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKE-QGGLNFRDLEVFNQAMLAKTSL---------------------ASPDFAR

Query:  VHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWI
        V    S+ W     G  LL  G+ R  GDG + ++  D WI
Subjt:  VHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWI

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein2.9e-0934.62Show/hide
Query:  ARVHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRI----LEDPWIPRPYTFKVIGYKAFDLELKVANCILSSGQ---WDIPKLSQFLLDEDVQEIIRL
        A+V   +S+ W     G+ LLK G R   GDG+ +RI    + D   PRP   +   YK    E+ + N     G    WD  K+SQF+   D   I R+
Subjt:  ARVHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRI----LEDPWIPRPYTFKVIGYKAFDLELKVANCILSSGQ---WDIPKLSQFLLDEDVQEIIRL

Query:  PISLS-IPDRWIWHFDKFGCYTVKSNYKLV
         ++ S  PD+ IW+++  G YTV+S Y L+
Subjt:  PISLS-IPDRWIWHFDKFGCYTVKSNYKLV

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.7e-0928.07Show/hide
Query:  YLGLPSFFQCSKGKDSKGILDRVWSYLQGWKKNFFSSGGK-EIFS------PTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKE
        YLGLP   +     D   +++++   +  W     S  G+ ++ S        + MS FRLP   +  I ++C+ F WS  +   +     W D+C PK+
Subjt:  YLGLPSFFQCSKGKDSKGILDRVWSYLQGWKKNFFSSGGK-EIFS------PTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKE

Query:  QGGLNFRDLEVFNQ
        +GGL  R L+  N+
Subjt:  QGGLNFRDLEVFNQ

AT4G29090.1 Ribonuclease H-like superfamily protein7.4e-2130.53Show/hide
Query:  PTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVFNQAMLAK---TSLASPD--FARVHDGK------------
        PTYTM+CF LPK +   I ++ A FWW +    K +HWK W  L   K +GG+ F+D+E FN A+L K     L+ P+   A+V   +            
Subjt:  PTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVFNQAMLAK---TSLASPD--FARVHDGK------------

Query:  ----SFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWIP--------RPYTFKVIGYKAFDLELKVANCILSSGQWDIPKLSQFLLDEDVQEII--RL
            SFVW        +L+ G R   G+G+ + I    W+         R        Y +    LKV++ I  SG+     + + L  E  +++I    
Subjt:  ----SFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWIP--------RPYTFKVIGYKAFDLELKVANCILSSGQWDIPKLSQFLLDEDVQEII--RL

Query:  PISLSIPDRWIWHFDKFGCYTVKSNY
        P    I D + W +   G YTVKS Y
Subjt:  PISLSIPDRWIWHFDKFGCYTVKSNY

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.8e-1938.3Show/hide
Query:  PTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKE-QGGLNFRDLEVFNQAMLAKTSL---------------------ASPDFAR
        P Y MSCFRL K L   +++    FWWSS ++K++I W  W+ LCK KE  GGL FRDL  FNQA+LAK S                      +S     
Subjt:  PTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKE-QGGLNFRDLEVFNQAMLAKTSL---------------------ASPDFAR

Query:  VHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWI
        V    S+ W     G  LL  G+ R  GDG + ++  D WI
Subjt:  VHDGKSFVW-----GLGLLKFGIRRQFGDGKYVRILEDPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTAATGCTAGGAGGAATAGAATCATGGGAATTGCTATGTCCCCGACATCACCAAAAATCTCCCATCTATTTTTTGCAGACGATAGCCTGATCTTTCTGAAGGC
TTCAGCGGAGGAATTTGGATATTTTAAGATTATTATGTCTGACTATGAATGTGCATCGGGTCAAAGTATTAATCTGGATAAATCGCAAATATGTTTTTCAAAGAATGTGC
CAACTGATTCTAAATCCTATCTTAGTTCAATTGTGCAAATGAAGCCTGTGGTTAATTTGGGATCTTATCTTGGCTTGCCCTCGTTTTTCCAATGCAGTAAGGGTAAGGAT
TCCAAGGGAATCCTCGATCGTGTATGGTCCTATCTTCAAGGATGGAAAAAGAATTTTTTCTCCAGTGGTGGGAAAGAAATTTTTTCTCCAACTTACACTATGAGTTGTTT
CAGGTTACCGAAAGGTTTACTAGACAATATTTCTGCTTTATGTGCAAGGTTTTGGTGGAGCTCCACCGATAGTAAAAAGCGTATTCATTGGAAGAAATGGAAGGATTTAT
GCAAGCCTAAAGAGCAGGGAGGACTAAATTTTCGGGATCTAGAGGTCTTCAATCAAGCAATGCTTGCAAAAACAAGCTTGGCGAGTCCTGACTTTGCCAGAGTCCACGAT
GGCAAGAGTTTTGTTTGGGGGTTGGGTTTATTGAAATTTGGAATACGAAGACAATTTGGTGATGGAAAATATGTCAGAATATTGGAAGACCCATGGATTCCTCGTCCTTA
TACTTTTAAAGTGATTGGTTATAAGGCATTCGATTTAGAGTTGAAAGTAGCGAATTGTATCCTGTCGTCTGGTCAGTGGGACATTCCAAAGCTTTCTCAATTCCTTTTGG
ATGAGGATGTTCAGGAGATCATAAGACTTCCAATTAGTTTGTCGATTCCGGATAGATGGATTTGGCATTTTGATAAATTTGGTTGTTATACTGTCAAGAGCAACTACAAA
TTGGTTTGGACGACAATGGGATATAGGGACATGGTGAAATCAAAGTTCATAATGGATATTCAAGACCGGTGGATTAATATTAGCAATAATGTTTCAACAATGGACTCGAA
CGGATTTGTTTGGGATCCTGGGCTATTTGGAACGACCGGAATAGTGTGCTCCATAAGTGTCCAATTCCCCCGGTGGGGGTCTGATGTGATTGGATACTGGAGTATCTTTC
CGAATACCAAACAGTTCACAATTCCAGTGGATGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGTAATGCTAGGAGGAATAGAATCATGGGAATTGCTATGTCCCCGACATCACCAAAAATCTCCCATCTATTTTTTGCAGACGATAGCCTGATCTTTCTGAAGGC
TTCAGCGGAGGAATTTGGATATTTTAAGATTATTATGTCTGACTATGAATGTGCATCGGGTCAAAGTATTAATCTGGATAAATCGCAAATATGTTTTTCAAAGAATGTGC
CAACTGATTCTAAATCCTATCTTAGTTCAATTGTGCAAATGAAGCCTGTGGTTAATTTGGGATCTTATCTTGGCTTGCCCTCGTTTTTCCAATGCAGTAAGGGTAAGGAT
TCCAAGGGAATCCTCGATCGTGTATGGTCCTATCTTCAAGGATGGAAAAAGAATTTTTTCTCCAGTGGTGGGAAAGAAATTTTTTCTCCAACTTACACTATGAGTTGTTT
CAGGTTACCGAAAGGTTTACTAGACAATATTTCTGCTTTATGTGCAAGGTTTTGGTGGAGCTCCACCGATAGTAAAAAGCGTATTCATTGGAAGAAATGGAAGGATTTAT
GCAAGCCTAAAGAGCAGGGAGGACTAAATTTTCGGGATCTAGAGGTCTTCAATCAAGCAATGCTTGCAAAAACAAGCTTGGCGAGTCCTGACTTTGCCAGAGTCCACGAT
GGCAAGAGTTTTGTTTGGGGGTTGGGTTTATTGAAATTTGGAATACGAAGACAATTTGGTGATGGAAAATATGTCAGAATATTGGAAGACCCATGGATTCCTCGTCCTTA
TACTTTTAAAGTGATTGGTTATAAGGCATTCGATTTAGAGTTGAAAGTAGCGAATTGTATCCTGTCGTCTGGTCAGTGGGACATTCCAAAGCTTTCTCAATTCCTTTTGG
ATGAGGATGTTCAGGAGATCATAAGACTTCCAATTAGTTTGTCGATTCCGGATAGATGGATTTGGCATTTTGATAAATTTGGTTGTTATACTGTCAAGAGCAACTACAAA
TTGGTTTGGACGACAATGGGATATAGGGACATGGTGAAATCAAAGTTCATAATGGATATTCAAGACCGGTGGATTAATATTAGCAATAATGTTTCAACAATGGACTCGAA
CGGATTTGTTTGGGATCCTGGGCTATTTGGAACGACCGGAATAGTGTGCTCCATAAGTGTCCAATTCCCCCGGTGGGGGTCTGATGTGATTGGATACTGGAGTATCTTTC
CGAATACCAAACAGTTCACAATTCCAGTGGATGCATAA
Protein sequenceShow/hide protein sequence
MLGNARRNRIMGIAMSPTSPKISHLFFADDSLIFLKASAEEFGYFKIIMSDYECASGQSINLDKSQICFSKNVPTDSKSYLSSIVQMKPVVNLGSYLGLPSFFQCSKGKD
SKGILDRVWSYLQGWKKNFFSSGGKEIFSPTYTMSCFRLPKGLLDNISALCARFWWSSTDSKKRIHWKKWKDLCKPKEQGGLNFRDLEVFNQAMLAKTSLASPDFARVHD
GKSFVWGLGLLKFGIRRQFGDGKYVRILEDPWIPRPYTFKVIGYKAFDLELKVANCILSSGQWDIPKLSQFLLDEDVQEIIRLPISLSIPDRWIWHFDKFGCYTVKSNYK
LVWTTMGYRDMVKSKFIMDIQDRWINISNNVSTMDSNGFVWDPGLFGTTGIVCSISVQFPRWGSDVIGYWSIFPNTKQFTIPVDA