; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006195 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006195
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr6:38906331..38906843
RNA-Seq ExpressionLag0006195
SyntenyLag0006195
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4280156.1 unnamed protein product [Prunus armeniaca]1.2e-0633.33Show/hide
Query:  IILHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDD-RCHADCFPVVAYIQSF
        I ++VD AW K +  GG    LR   GKL+A M K   L +S + VE   VLEGL +   +N +K+++ SDS+ ++S +R ++ R +    P++  I+  
Subjt:  IILHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDD-RCHADCFPVVAYIQSF

Query:  FSSFEKINFCHINREYNLLSHELASL
         S F  + +  ++R+ N  +H  A+L
Subjt:  FSSFEKINFCHINREYNLLSHELASL

RYR10083.1 hypothetical protein Ahy_B05g078550 [Arachis hypogaea]2.0e-0631.58Show/hide
Query:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCF-PVVAYIQSFFS
        ++VDAA   H+  GG  VV+R +MG ++A   + IP P      E      GL         KV++ SD++ ++  L K  RC   CF   +    S   
Subjt:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCF-PVVAYIQSFFS

Query:  SFEKINFCHINREYNLLSHELASLGMDSTTRVW
        +F  + F H+ RE N ++HELA+L + +   +W
Subjt:  SFEKINFCHINREYNLLSHELASLGMDSTTRVW

VAH31913.1 unnamed protein product [Triticum turgidum subsp. durum]6.8e-0729.17Show/hide
Query:  GEDIILHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKD-------DRCHADCF
        G+ + ++VDA++      G    V+R K GK +A     + +    L  E + +  GL +       +V+V SD+  LI I++ +          + DCF
Subjt:  GEDIILHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKD-------DRCHADCF

Query:  PVVAYIQSFFSSFEKINFCHINREYNLLSHELASLGMDSTTRVW
               S  S F ++ + H NRE N ++HELA L    T+RVW
Subjt:  PVVAYIQSFFSSFEKINFCHINREYNLLSHELASLGMDSTTRVW

XP_016199994.1 uncharacterized protein LOC107641002 [Arachis ipaensis]2.3e-0730.77Show/hide
Query:  VDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCF-PVVAYIQSFFSSF
        VDAA   H+  GG  VV+R +MG ++A+  + IP P      E      GL         KV++ SD+  ++  L++  RC + CF   +    S   +F
Subjt:  VDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCF-PVVAYIQSFFSSF

Query:  EKINFCHINREYNLLSHELASLGMDSTTRVWSRNFLDWALDLA
          + F H+ RE N ++HELA+L + +   +W  + L+   +LA
Subjt:  EKINFCHINREYNLLSHELASLGMDSTTRVWSRNFLDWALDLA

XP_030969948.1 uncharacterized protein LOC115990241 [Quercus lobata]8.8e-0732.23Show/hide
Query:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCFPVVAYIQSFFSS
        +++D A  + + T G +VV+R + G+++A + + I LPSS L VE +    GL++      R +++ SDS  LI+ LR+     +    +V  I+   S 
Subjt:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCFPVVAYIQSFFSS

Query:  FEKINFCHINREYNLLSHELA
           IN+ H+ R+ N L+H LA
Subjt:  FEKINFCHINREYNLLSHELA

TrEMBL top hitse value%identityAlignment
A0A2P6QT88 Putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein3.1e-0525.37Show/hide
Query:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCFPVVAYIQSFFSS
        L+ D A   +    G   V+R ++G+LV  +         P  VE + + EGL+ + +  IR + V  D+L +I+ L + +    +   V+  ++     
Subjt:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCFPVVAYIQSFFSS

Query:  FEKINFCHINREYNLLSHELASLGMDSTTRVWSR
        FE +N+ H+ ++ N ++HELA   + S   ++ R
Subjt:  FEKINFCHINREYNLLSHELASLGMDSTTRVWSR

A0A444Z7C1 RNase H domain-containing protein9.5e-0731.58Show/hide
Query:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCF-PVVAYIQSFFS
        ++VDAA   H+  GG  VV+R +MG ++A   + IP P      E      GL         KV++ SD++ ++  L K  RC   CF   +    S   
Subjt:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCF-PVVAYIQSFFS

Query:  SFEKINFCHINREYNLLSHELASLGMDSTTRVW
        +F  + F H+ RE N ++HELA+L + +   +W
Subjt:  SFEKINFCHINREYNLLSHELASLGMDSTTRVW

A0A446L2X3 Uncharacterized protein3.3e-0729.17Show/hide
Query:  GEDIILHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKD-------DRCHADCF
        G+ + ++VDA++      G    V+R K GK +A     + +    L  E + +  GL +       +V+V SD+  LI I++ +          + DCF
Subjt:  GEDIILHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKD-------DRCHADCF

Query:  PVVAYIQSFFSSFEKINFCHINREYNLLSHELASLGMDSTTRVW
               S  S F ++ + H NRE N ++HELA L    T+RVW
Subjt:  PVVAYIQSFFSSFEKINFCHINREYNLLSHELASLGMDSTTRVW

A0A803NTU1 Uncharacterized protein1.6e-0628.89Show/hide
Query:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCFPVVAYIQSFFSS
        ++VDA     N +  + VV+R   G+++         P S L  E + ++ GLK+     ++K  V SD L+ I+++    R  +D   ++  I     +
Subjt:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCFPVVAYIQSFFSS

Query:  FEKINFCHINREYNLLSHELASLGMDS-TTRVWSR
        F+ + FC   R+ NLL+H LA L + S T+  W+R
Subjt:  FEKINFCHINREYNLLSHELASLGMDS-TTRVWSR

J7G0Q7 Non-ltr retroelement reverse transcriptase2.3e-0527.78Show/hide
Query:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCFPVVAYIQSFFSS
        ++ D A    ++  G   ++R + G L+    K    P S L  E + +  GL +   R +R +MV SD L  I +L   +RC A    +V  IQ+  + 
Subjt:  LHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCFPVVAYIQSFFSS

Query:  FEKINFCHINREYNLLSHELASLGMDSTTR-VWSRNFLDWALDL
            +  H+ RE N  +H +A     +  R VW  +  DW + L
Subjt:  FEKINFCHINREYNLLSHELASLGMDSTTR-VWSRNFLDWALDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCAGGAGGGGAGGATATTATTTTGCATGTTGATGCAGCTTGGACCAAACACAACAAGACCGGTGGAGCAAAGGTAGTTCTGCGCACAAAGATGGGAAAG
TTGGTGGCCATTATGCAAAAAGGGATTCCTTTACCCTCATCTCCATTATGTGTTGAGGAGATAGTGGTTCTTGAGGGTCTTAAAATGACTTCTATTAGGAATATT
CGTAAGGTAATGGTATGCTCGGATTCCCTATCGTTGATCTCCATTCTTCGTAAAGATGATCGGTGTCATGCAGATTGCTTTCCCGTTGTGGCATATATTCAAAGT
TTCTTTTCATCTTTTGAAAAGATTAACTTTTGTCATATAAATCGTGAGTATAACTTACTGTCGCATGAACTGGCTAGTTTAGGCATGGATTCCACTACTCGAGTT
TGGAGTAGGAATTTCCTAGATTGGGCTTTAGATTTAGCTAGTAGAGAATTGTCTTGTTTTGTATCCCGCGAGGGAATCATTGTTCTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCAGGAGGGGAGGATATTATTTTGCATGTTGATGCAGCTTGGACCAAACACAACAAGACCGGTGGAGCAAAGGTAGTTCTGCGCACAAAGATGGGAAAG
TTGGTGGCCATTATGCAAAAAGGGATTCCTTTACCCTCATCTCCATTATGTGTTGAGGAGATAGTGGTTCTTGAGGGTCTTAAAATGACTTCTATTAGGAATATT
CGTAAGGTAATGGTATGCTCGGATTCCCTATCGTTGATCTCCATTCTTCGTAAAGATGATCGGTGTCATGCAGATTGCTTTCCCGTTGTGGCATATATTCAAAGT
TTCTTTTCATCTTTTGAAAAGATTAACTTTTGTCATATAAATCGTGAGTATAACTTACTGTCGCATGAACTGGCTAGTTTAGGCATGGATTCCACTACTCGAGTT
TGGAGTAGGAATTTCCTAGATTGGGCTTTAGATTTAGCTAGTAGAGAATTGTCTTGTTTTGTATCCCGCGAGGGAATCATTGTTCTTGAATGA
Protein sequenceShow/hide protein sequence
MISGGEDIILHVDAAWTKHNKTGGAKVVLRTKMGKLVAIMQKGIPLPSSPLCVEEIVVLEGLKMTSIRNIRKVMVCSDSLSLISILRKDDRCHADCFPVVAYIQS
FFSSFEKINFCHINREYNLLSHELASLGMDSTTRVWSRNFLDWALDLASRELSCFVSREGIIVLE