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Lag0006196 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006196
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr6:38909775..38911431
RNA-Seq ExpressionLag0006196
SyntenyLag0006196
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217227898.1 hypothetical protein, partial [Desertibacillus haloalkaliphilus]3.5e-0438.85Show/hide
Query:  GGGGDEKGRRRRRTIVGENGEGEERIWGGGMREREKRKKGRKESGCRWRGRDCWIGVGRLM---AVESSGTVAGRRREEETEQKKRKKEGKKGGRVSGWG
        GGGG  +G+R+R    G  G+G+ER    G  + EK+KKGR+  G   RG+    G GR       E  G    +R+E++  +KKR+++GKK       G
Subjt:  GGGGDEKGRRRRRTIVGENGEGEERIWGGGMREREKRKKGRKESGCRWRGRDCWIGVGRLM---AVESSGTVAGRRREEETEQKKRKKEGKKGGRVSGWG

Query:  EREEKTLSPSPLL---SRPSPAREERGKGERKKGKERER
        EREEK            R    R ERG+GERK+ +ERER
Subjt:  EREEKTLSPSPLL---SRPSPAREERGKGERKKGKERER

WP_220771251.1 hypothetical protein, partial [Shewanella sp. MBTL60-007]3.5e-0439.19Show/hide
Query:  GGGGDEKGRRRRRTIVGENGEGEERIWG--------GGMREREKRKKGRKESGCRWRGRDCWIGVGRLMAVESSGTVAGRRREEETEQKKRKKEGKKGGR
        G G  E+G R+ R    E GEG E+  G        GG +E EKRK+G K  G +  GR    G GR       G    RRREE+ E+++ K++GK+GG 
Subjt:  GGGGDEKGRRRRRTIVGENGEGEERIWG--------GGMREREKRKKGRKESGCRWRGRDCWIGVGRLMAVESSGTVAGRRREEETEQKKRKKEGKKGGR

Query:  VSGWGEREEKTLSPSPLLSRPSPAREERGKGERKKGKERERGRKLRVG
          G G  EEK              R +R KGER+KGKER+  RK + G
Subjt:  VSGWGEREEKTLSPSPLLSRPSPAREERGKGERKKGKERERGRKLRVG

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCGTTTCTCCCCAGCTCCAACGCCGACGAGCTTCTAAAATGGAAGAGAGCTCTCATATTTGCTCTGTGGGTGTTCGGAGGTGGGGGAGATGAAAAAGGGCGGCG
GCGACGGCGAACGATCGTTGGTGAGAATGGGGAAGGAGAGGAAAGGATTTGGGGGGGGGGTATGAGGGAGAGAGAAAAAAGAAAGAAGGGAAGAAAGGAGAGCGGATGTC
GGTGGAGAGGAAGGGATTGTTGGATTGGAGTTGGTCGGCTGATGGCGGTGGAGAGCAGCGGTACCGTCGCCGGCCGGCGACGAGAAGAAGAAACAGAACAAAAAAAAAGA
AAGAAAGAAGGGAAGAAAGGGGGGAGGGTTTCGGGGTGGGGAGAGAGAGAGGAGAAGACGTTGTCGCCGTCGCCGTTGTTGTCGCGTCCATCGCCGGCAAGGGAAGAGAG
GGGGAAAGGAGAGAGAAAGAAAGGGAAAGAAAGGGAAAGGGGAAGAAAGCTTCGGGTGGGAGGACTTCAAGACTTCAAGGAATCGATTGAAGCTTCAGACTCGAGATCAA
GCGTTCCAGCTCTCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCGTTTCTCCCCAGCTCCAACGCCGACGAGCTTCTAAAATGGAAGAGAGCTCTCATATTTGCTCTGTGGGTGTTCGGAGGTGGGGGAGATGAAAAAGGGCGGCG
GCGACGGCGAACGATCGTTGGTGAGAATGGGGAAGGAGAGGAAAGGATTTGGGGGGGGGGTATGAGGGAGAGAGAAAAAAGAAAGAAGGGAAGAAAGGAGAGCGGATGTC
GGTGGAGAGGAAGGGATTGTTGGATTGGAGTTGGTCGGCTGATGGCGGTGGAGAGCAGCGGTACCGTCGCCGGCCGGCGACGAGAAGAAGAAACAGAACAAAAAAAAAGA
AAGAAAGAAGGGAAGAAAGGGGGGAGGGTTTCGGGGTGGGGAGAGAGAGAGGAGAAGACGTTGTCGCCGTCGCCGTTGTTGTCGCGTCCATCGCCGGCAAGGGAAGAGAG
GGGGAAAGGAGAGAGAAAGAAAGGGAAAGAAAGGGAAAGGGGAAGAAAGCTTCGGGTGGGAGGACTTCAAGACTTCAAGGAATCGATTGAAGCTTCAGACTCGAGATCAA
GCGTTCCAGCTCTCGAGTGA
Protein sequenceShow/hide protein sequence
MPPFLPSSNADELLKWKRALIFALWVFGGGGDEKGRRRRRTIVGENGEGEERIWGGGMREREKRKKGRKESGCRWRGRDCWIGVGRLMAVESSGTVAGRRREEETEQKKR
KKEGKKGGRVSGWGEREEKTLSPSPLLSRPSPAREERGKGERKKGKERERGRKLRVGGLQDFKESIEASDSRSSVPALE