; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006198 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006198
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 reverse transcriptase-like
Genome locationchr6:38946582..38949037
RNA-Seq ExpressionLag0006198
SyntenyLag0006198
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN62051.1 hypothetical protein VITISV_016641 [Vitis vinifera]1.5e-5937.54Show/hide
Query:  DGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPIS
        +G++W  ID +S  +LE+PF EEEIYKA+  +   K+ G DG     ++  W+++K DLV VF EF ++GIIN+ TN ++I LLPKK     + DFRPIS
Subjt:  DGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPIS

Query:  LITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL---------------------------
        LITSLYKIIAKVL  RL+ VL  TI   Q AFV+GRQI DA+L+A+E V+E++   E   + K+D EK YD L                           
Subjt:  LITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL---------------------------

Query:  -----------------------------------------------PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNS
                                                       PI YLG PLGGN +   FW+P+++++ ++LD W+   LS GGR+TL QS L  
Subjt:  -----------------------------------------------PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNS

Query:  LSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGLRRG
        +  Y  SL R P  +   +E++ R+F+W+G       +LV W+    P S GGL  G
Subjt:  LSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGLRRG

CAN62051.1 hypothetical protein VITISV_016641 [Vitis vinifera]1.3e-0547.92Show/hide
Query:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE
        +L R TS+H+P+ L     KWGP+PFRFEN+WL+  +F+++   WW E
Subjt:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE

CAN70928.1 hypothetical protein VITISV_016057 [Vitis vinifera]9.0e-6835.56Show/hide
Query:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE------------------------------QSVS------------------
        +L R TS+H+ + L     KWGP+PFR EN+WL+ P+F++    WW E                               S S                  
Subjt:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE------------------------------QSVS------------------

Query:  -----DGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRD
             +G++W  I  +S  +LE+PF EE+I KA+  +   K+ G DG     ++  W+++K DLV VF EF ++GIIN+ TN ++I LLPKK     +  
Subjt:  -----DGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRD

Query:  FRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL----------------------
        +RPISLIT+LYKIIAKVL  RL+ +L  TI   Q AFV+GRQI DA+L+A+E V+E+K  +E     K+D EK YD +                      
Subjt:  FRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL----------------------

Query:  ---------PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSN
                 PI YLG PLGGN +   FW+P+++++  +LD W+   LS  GR+TL QS L  +  Y  SL + P  +   +E++ RDF+W G       +
Subjt:  ---------PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSN

Query:  LVKWEWTAPPTSLGGLRRG
        LV W+    P + GGL  G
Subjt:  LVKWEWTAPPTSLGGLRRG

CAN71492.1 hypothetical protein VITISV_005343 [Vitis vinifera]1.9e-6233.8Show/hide
Query:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE--------------------------------QSVSD---------------
        +L R TS+H+ + L     KWGP+PFRFEN+WL+ PNF++    WW E                                +S+ +               
Subjt:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE--------------------------------QSVSD---------------

Query:  ------GINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRD
              G+NW  I  +S  +LE+PF E+EI KA   +   K+ G DG     ++  W+++K DLV VF EF ++GIIN+ TN ++I LLPKK     + D
Subjt:  ------GINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRD

Query:  FRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKLPISYL-------GFP-------
        +RPISLITSLYKIIAKVL  RL+ VL  TI   Q AFV+ RQI DA+L+ +E V+E++  +E   + K+D EK Y+ +   +L       GF        
Subjt:  FRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKLPISYL-------GFP-------

Query:  ------------LGGNH------------RRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGG
                    + GN             + C FW+P+++++ ++LD W+   LS GGR+TL QS L  +  +  SL + P  +   +E++ RDF+W+  
Subjt:  ------------LGGNH------------RRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGG

Query:  TYKPGSNLVKWEWTAPPTSLGGLRRG
              +LV W+      + GGL  G
Subjt:  TYKPGSNLVKWEWTAPPTSLGGLRRG

CAN77234.1 hypothetical protein VITISV_010061 [Vitis vinifera]2.5e-6242.04Show/hide
Query:  FEKHIKDWWEEQSVSDGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLP
        FEK       E    +G++W  I  +S  +L++PF EEEI K +  +   K+ G DG     +++ W+++K +LV VF EF ++GIIN+ TN ++I LLP
Subjt:  FEKHIKDWWEEQSVSDGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLP

Query:  KKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL------------
        KK     + DFRPISLITSLYKIIAKVL  RL+ VL  TI   Q AFV+GRQI DA+L+A+E V+E++   E   I K+D EK YD              
Subjt:  KKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL------------

Query:  ----PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWE
            PI YLG PLG N + C FW+P+++++  +LD W+   LS G R+TL QS L  L  Y  SL + P  +   +E++ RDF+W+G       +LV W+
Subjt:  ----PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWE

Query:  WTAPPTSLGGLRRG
            P ++GGL  G
Subjt:  WTAPPTSLGGLRRG

RVX12865.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]5.1e-6332.24Show/hide
Query:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE---------------QSVSDGI-NW-------VSIDSQSCEKLETPFQEEEI
        +L R TS+H+P+ L     KWGP PFRFEN+WL+ PNF++    WW E               Q V D +  W       +    +   +LE+PF EEEI
Subjt:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE---------------QSVSDGI-NW-------VSIDSQSCEKLETPFQEEEI

Query:  YKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTI
        +KA+  +   K+ G DG     ++  W ++K DLV+VF EF ++GIIN+ TN ++I LLPKK       DFRPISLITSLYKIIAKVLV RL+ VL  TI
Subjt:  YKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTI

Query:  SDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL----------------------------------------------------
           Q AFV+GRQI DA+L+A+E V+E++   E   + K+D EK YD +                                                    
Subjt:  SDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL----------------------------------------------------

Query:  -----------------------------------------------------------------------------PISYLGFPLGGNHRRCSFWEPLV
                                                                                     P+ YLG PLGGN + C FW P++
Subjt:  -----------------------------------------------------------------------------PISYLGFPLGGNHRRCSFWEPLV

Query:  DKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGLRRG
         ++ ++LD W+   LS GGR+TL QS L  +  Y  SL + P  +   +E++ RDF+W+G       +LV W+    P S GGL  G
Subjt:  DKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGLRRG

TrEMBL top hitse value%identityAlignment
A0A438JVA3 LINE-1 retrotransposable element ORF2 protein2.5e-6332.24Show/hide
Query:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE---------------QSVSDGI-NW-------VSIDSQSCEKLETPFQEEEI
        +L R TS+H+P+ L     KWGP PFRFEN+WL+ PNF++    WW E               Q V D +  W       +    +   +LE+PF EEEI
Subjt:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE---------------QSVSDGI-NW-------VSIDSQSCEKLETPFQEEEI

Query:  YKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTI
        +KA+  +   K+ G DG     ++  W ++K DLV+VF EF ++GIIN+ TN ++I LLPKK       DFRPISLITSLYKIIAKVLV RL+ VL  TI
Subjt:  YKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTI

Query:  SDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL----------------------------------------------------
           Q AFV+GRQI DA+L+A+E V+E++   E   + K+D EK YD +                                                    
Subjt:  SDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL----------------------------------------------------

Query:  -----------------------------------------------------------------------------PISYLGFPLGGNHRRCSFWEPLV
                                                                                     P+ YLG PLGGN + C FW P++
Subjt:  -----------------------------------------------------------------------------PISYLGFPLGGNHRRCSFWEPLV

Query:  DKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGLRRG
         ++ ++LD W+   LS GGR+TL QS L  +  Y  SL + P  +   +E++ RDF+W+G       +LV W+    P S GGL  G
Subjt:  DKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGLRRG

A5AN54 Reverse transcriptase domain-containing protein9.4e-6333.8Show/hide
Query:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE--------------------------------QSVSD---------------
        +L R TS+H+ + L     KWGP+PFRFEN+WL+ PNF++    WW E                                +S+ +               
Subjt:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE--------------------------------QSVSD---------------

Query:  ------GINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRD
              G+NW  I  +S  +LE+PF E+EI KA   +   K+ G DG     ++  W+++K DLV VF EF ++GIIN+ TN ++I LLPKK     + D
Subjt:  ------GINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRD

Query:  FRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKLPISYL-------GFP-------
        +RPISLITSLYKIIAKVL  RL+ VL  TI   Q AFV+ RQI DA+L+ +E V+E++  +E   + K+D EK Y+ +   +L       GF        
Subjt:  FRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKLPISYL-------GFP-------

Query:  ------------LGGNH------------RRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGG
                    + GN             + C FW+P+++++ ++LD W+   LS GGR+TL QS L  +  +  SL + P  +   +E++ RDF+W+  
Subjt:  ------------LGGNH------------RRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGG

Query:  TYKPGSNLVKWEWTAPPTSLGGLRRG
              +LV W+      + GGL  G
Subjt:  TYKPGSNLVKWEWTAPPTSLGGLRRG

A5BSG1 Uncharacterized protein1.2e-6242.04Show/hide
Query:  FEKHIKDWWEEQSVSDGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLP
        FEK       E    +G++W  I  +S  +L++PF EEEI K +  +   K+ G DG     +++ W+++K +LV VF EF ++GIIN+ TN ++I LLP
Subjt:  FEKHIKDWWEEQSVSDGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLP

Query:  KKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL------------
        KK     + DFRPISLITSLYKIIAKVL  RL+ VL  TI   Q AFV+GRQI DA+L+A+E V+E++   E   I K+D EK YD              
Subjt:  KKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL------------

Query:  ----PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWE
            PI YLG PLG N + C FW+P+++++  +LD W+   LS G R+TL QS L  L  Y  SL + P  +   +E++ RDF+W+G       +LV W+
Subjt:  ----PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWE

Query:  WTAPPTSLGGLRRG
            P ++GGL  G
Subjt:  WTAPPTSLGGLRRG

A5C377 Uncharacterized protein7.5e-6037.54Show/hide
Query:  DGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPIS
        +G++W  ID +S  +LE+PF EEEIYKA+  +   K+ G DG     ++  W+++K DLV VF EF ++GIIN+ TN ++I LLPKK     + DFRPIS
Subjt:  DGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPIS

Query:  LITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL---------------------------
        LITSLYKIIAKVL  RL+ VL  TI   Q AFV+GRQI DA+L+A+E V+E++   E   + K+D EK YD L                           
Subjt:  LITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL---------------------------

Query:  -----------------------------------------------PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNS
                                                       PI YLG PLGGN +   FW+P+++++ ++LD W+   LS GGR+TL QS L  
Subjt:  -----------------------------------------------PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNS

Query:  LSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGLRRG
        +  Y  SL R P  +   +E++ R+F+W+G       +LV W+    P S GGL  G
Subjt:  LSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGLRRG

A5C377 Uncharacterized protein6.2e-0647.92Show/hide
Query:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE
        +L R TS+H+P+ L     KWGP+PFRFEN+WL+  +F+++   WW E
Subjt:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE

A5C6D8 Reverse transcriptase domain-containing protein4.4e-6835.56Show/hide
Query:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE------------------------------QSVS------------------
        +L R TS+H+ + L     KWGP+PFR EN+WL+ P+F++    WW E                               S S                  
Subjt:  MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEE------------------------------QSVS------------------

Query:  -----DGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRD
             +G++W  I  +S  +LE+PF EE+I KA+  +   K+ G DG     ++  W+++K DLV VF EF ++GIIN+ TN ++I LLPKK     +  
Subjt:  -----DGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRD

Query:  FRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL----------------------
        +RPISLIT+LYKIIAKVL  RL+ +L  TI   Q AFV+GRQI DA+L+A+E V+E+K  +E     K+D EK YD +                      
Subjt:  FRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKL----------------------

Query:  ---------PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSN
                 PI YLG PLGGN +   FW+P+++++  +LD W+   LS  GR+TL QS L  +  Y  SL + P  +   +E++ RDF+W G       +
Subjt:  ---------PISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSN

Query:  LVKWEWTAPPTSLGGLRRG
        LV W+    P + GGL  G
Subjt:  LVKWEWTAPPTSLGGLRRG

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein3.9e-1328.57Show/hide
Query:  IDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKK-KKVANVRDFRPISLITSLY
        ++ +  E L  P    EI   +  +   KS G DG   EFY+++   L P L+++FQ   + GI+     +  I L+PK  +      +FRPISL+    
Subjt:  IDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKK-KKVANVRDFRPISLITSLY

Query:  KIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEE-QKSKKEGAYILKLDLEKVYDKL
        KI+ K+L  R++  +   I   Q  F+ G Q    I  +   ++   ++K +   I+ +D EK +DK+
Subjt:  KIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEE-QKSKKEGAYILKLDLEKVYDKL

P08548 LINE-1 reverse transcriptase homolog7.3e-1229.76Show/hide
Query:  IDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKK-KKVANVRDFRPISLITSLY
        +  +  E L  P    EI   +  +   KS G DG   EFY+ F   L P L+ +FQ   + GI+     +  I L+PK  K      ++RPISL+    
Subjt:  IDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKK-KKVANVRDFRPISLITSLY

Query:  KIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEE-QKSKKEGAYILKLDLEKVYDKL
        KI+ K+L  R++  +   I   Q  F+ G Q    I  +   ++   K K +   IL +D EK +D +
Subjt:  KIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEE-QKSKKEGAYILKLDLEKVYDKL

P0C2F6 Putative ribonuclease H protein At1g657502.2e-0830.23Show/hide
Query:  LVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGL
        +++++  ++  WR   LS  GR+TL ++VL+S+ ++  S    P+ I+  ++++ R F+W     K   +LVKW     P   GGL
Subjt:  LVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLGGL

P11369 LINE-1 retrotransposable element ORF2 protein9.5e-1229.17Show/hide
Query:  IDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPK-KKKVANVRDFRPISLITSLY
        ++    + L +P   +EI   +  +   KS G DG + EFY+ F   L P L ++F +    G +     +  I L+PK +K    + +FRPISL+    
Subjt:  IDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPK-KKKVANVRDFRPISLITSLY

Query:  KIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEE-QKSKKEGAYILKLDLEKVYDKL
        KI+ K+L  R+++ +   I   Q  F+ G Q    I  +   +    K K +   I+ LD EK +DK+
Subjt:  KIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEE-QKSKKEGAYILKLDLEKVYDKL

P14381 Transposon TX1 uncharacterized 149 kDa protein2.3e-2132.02Show/hide
Query:  FENIWLEAPNFEKHIKDWWEEQSVSDGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKC
        ++N++   P      ++ W      DG+  VS   +  E+LETP   +E+ +A+ ++   KS GLDG+  EF++ FW+ L PD   V  E F+ G +   
Subjt:  FENIWLEAPNFEKHIKDWWEEQSVSDGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKC

Query:  TNQTYIYLLPKKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKLPI
          +  + LLPKK  +  ++++RP+SL+++ YKI+AK +  RLK VL   I   Q+  V GR I D + +  + +   +        L LD EK +D++  
Subjt:  TNQTYIYLLPKKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEKVYDKLPI

Query:  SYL
         YL
Subjt:  SYL

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.3e-0836.36Show/hide
Query:  EEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPISLITSLYKII
        ++EI  AV  +   K+ G D    EF+ + W ++K   +   +EFF+ G + K  N T I L+PK   V  +  FRP+S  T +YKII
Subjt:  EEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPDLVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPISLITSLYKII

AT4G20520.1 RNA binding;RNA-directed DNA polymerases5.0e-0842.31Show/hide
Query:  LVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKK--EGAYILKLDLEKVYDKLPISYL-------GFP
        +VERLK ++ N I   QA+F+ GR  +D I+   E V   + KK  +G  +LKLDLEK YD++   YL       GFP
Subjt:  LVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKK--EGAYILKLDLEKVYDKLPISYL-------GFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATCGCCCCACCTCAAATCACTTCCCCTTAGCTTTATCCATTGGTGCGTTGAAATGGGGTCCTTCCCCGTTTAGGTTTGAAAATATATGGTTGGAAGCTCCAAA
TTTTGAAAAACACATTAAGGATTGGTGGGAGGAGCAATCAGTCTCAGATGGAATAAATTGGGTGTCCATTGACAGTCAATCTTGCGAGAAGCTTGAGACCCCTTTTCAGG
AAGAGGAGATTTACAAAGCAGTGGGTGTTATTGGTTGCCTTAAATCCCTGGGCCTTGACGGTATGGCTGGTGAGTTTTATAAAAAGTTTTGGAACATCTTGAAGCCGGAT
TTAGTAGAGGTGTTCCAGGAGTTTTTTCAAAACGGCATCATCAACAAGTGCACGAACCAAACTTATATTTACTTGCTTCCCAAGAAGAAAAAGGTGGCTAACGTTAGAGA
TTTTCGCCCCATTAGTCTCATCACCTCTCTTTATAAAATTATAGCCAAGGTTCTAGTCGAAAGATTGAAAGATGTGCTACCAAATACCATTAGCGATTGCCAAGCAGCCT
TTGTGAAAGGTAGACAAATTTCGGATGCTATCCTTGTGGCTTCGGAAACTGTGGAGGAACAAAAGTCGAAGAAGGAAGGGGCGTACATTCTTAAGTTAGATCTTGAGAAA
GTTTATGATAAGCTCCCTATTAGCTACCTTGGCTTCCCTCTAGGAGGCAATCATCGTAGATGCTCCTTTTGGGAGCCTTTGGTAGACAAATTACTGAAGAAGTTGGATGT
TTGGCGCTCTCTTCTTTTGTCCAAAGGTGGTAGAGTTACTTTGGCTCAATCGGTCCTAAATAGTCTCTCTATCTACTGTTTTTCTCTAGCTCGAGCTCCTAAGAAGATTA
TTAAATCTATGGAGAAAATTATCAGAGATTTCGTTTGGAATGGTGGCACTTACAAACCTGGATCCAATCTCGTTAAATGGGAGTGGACAGCTCCTCCAACTTCTTTAGGA
GGCCTTAGAAGAGGCTTGTTTGAAAGGGAGATTCAAGAGTGGATAGCCTTGGTGGAGAAGCTCAACTCTGTGCAGAGGGGGAAGGAATGGACCGAATTCAGTGGACCCTT
GAAGGCTCGGGATCCTATACCAGTAAATCTAAGTTTTATCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATCGCCCCACCTCAAATCACTTCCCCTTAGCTTTATCCATTGGTGCGTTGAAATGGGGTCCTTCCCCGTTTAGGTTTGAAAATATATGGTTGGAAGCTCCAAA
TTTTGAAAAACACATTAAGGATTGGTGGGAGGAGCAATCAGTCTCAGATGGAATAAATTGGGTGTCCATTGACAGTCAATCTTGCGAGAAGCTTGAGACCCCTTTTCAGG
AAGAGGAGATTTACAAAGCAGTGGGTGTTATTGGTTGCCTTAAATCCCTGGGCCTTGACGGTATGGCTGGTGAGTTTTATAAAAAGTTTTGGAACATCTTGAAGCCGGAT
TTAGTAGAGGTGTTCCAGGAGTTTTTTCAAAACGGCATCATCAACAAGTGCACGAACCAAACTTATATTTACTTGCTTCCCAAGAAGAAAAAGGTGGCTAACGTTAGAGA
TTTTCGCCCCATTAGTCTCATCACCTCTCTTTATAAAATTATAGCCAAGGTTCTAGTCGAAAGATTGAAAGATGTGCTACCAAATACCATTAGCGATTGCCAAGCAGCCT
TTGTGAAAGGTAGACAAATTTCGGATGCTATCCTTGTGGCTTCGGAAACTGTGGAGGAACAAAAGTCGAAGAAGGAAGGGGCGTACATTCTTAAGTTAGATCTTGAGAAA
GTTTATGATAAGCTCCCTATTAGCTACCTTGGCTTCCCTCTAGGAGGCAATCATCGTAGATGCTCCTTTTGGGAGCCTTTGGTAGACAAATTACTGAAGAAGTTGGATGT
TTGGCGCTCTCTTCTTTTGTCCAAAGGTGGTAGAGTTACTTTGGCTCAATCGGTCCTAAATAGTCTCTCTATCTACTGTTTTTCTCTAGCTCGAGCTCCTAAGAAGATTA
TTAAATCTATGGAGAAAATTATCAGAGATTTCGTTTGGAATGGTGGCACTTACAAACCTGGATCCAATCTCGTTAAATGGGAGTGGACAGCTCCTCCAACTTCTTTAGGA
GGCCTTAGAAGAGGCTTGTTTGAAAGGGAGATTCAAGAGTGGATAGCCTTGGTGGAGAAGCTCAACTCTGTGCAGAGGGGGAAGGAATGGACCGAATTCAGTGGACCCTT
GAAGGCTCGGGATCCTATACCAGTAAATCTAAGTTTTATCATTTGA
Protein sequenceShow/hide protein sequence
MLNRPTSNHFPLALSIGALKWGPSPFRFENIWLEAPNFEKHIKDWWEEQSVSDGINWVSIDSQSCEKLETPFQEEEIYKAVGVIGCLKSLGLDGMAGEFYKKFWNILKPD
LVEVFQEFFQNGIINKCTNQTYIYLLPKKKKVANVRDFRPISLITSLYKIIAKVLVERLKDVLPNTISDCQAAFVKGRQISDAILVASETVEEQKSKKEGAYILKLDLEK
VYDKLPISYLGFPLGGNHRRCSFWEPLVDKLLKKLDVWRSLLLSKGGRVTLAQSVLNSLSIYCFSLARAPKKIIKSMEKIIRDFVWNGGTYKPGSNLVKWEWTAPPTSLG
GLRRGLFEREIQEWIALVEKLNSVQRGKEWTEFSGPLKARDPIPVNLSFII