; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006207 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006207
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr6:39122350..39123692
RNA-Seq ExpressionLag0006207
SyntenyLag0006207
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEJ07916.1 putative ZmL1 non-LTR retrotransposon protein [Zea mays]3.4e-2827.56Show/hide
Query:  GQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKED---SIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWKIVQNA
        G W+  L+R+ FL  DAD IL +P ++   ED + W  DPKG+FSVK  Y LA  + D   +  AS S   + E VWKSIW+++   ++K+ +W++  N+
Subjt:  GQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKED---SIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWKIVQNA

Query:  LPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGL---------------FPNLTHVFSPRRD-----------WWSSKDYWDELVVNLN
         P   NI  RGI    LC +C +  E+G H+F  CK  K+ W  L                  +  + + R +           WWS+++        + 
Subjt:  LPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGL---------------FPNLTHVFSPRRD-----------WWSSKDYWDELVVNLN

Query:  KEEASWAEE------------QRLPEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEG
         E     EE            ++L   ++ R P  + +   P   ++K+N D ++   S +G  G  IRG  G  + AG   +   +   + E+ A ++G
Subjt:  KEEASWAEE------------QRLPEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEG

Query:  MKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKS-MSSTIEVNSVMKCSRLSNILAHSLARAAA
        +       E       + ++IE+D+  +   + S   DL+ +  +  EI+S M S      V KC R  N++A  LA   A
Subjt:  MKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKS-MSSTIEVNSVMKCSRLSNILAHSLARAAA

GAY61101.1 hypothetical protein CUMW_207140, partial [Citrus unshiu]3.7e-2727.97Show/hide
Query:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK
        V + I  +  W+ +LI   F   DAD I ++P  + ++ED++IW     G ++VK  Y  A +       S S+ SK E  W  IWSL    +++I VW+
Subjt:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK

Query:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWE-GLFPN------------LTHVFSPRRD-----------W--WSSKDYW---
          +N LP+ EN+  R IV    C LC+   EN  H   +CK +K+ W   LF N            L H     R            W  W++++ W   
Subjt:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWE-GLFPN------------LTHVFSPRRD-----------W--WSSKDYW---

Query:  ----DELVVNLNKEEASWAEEQRLPEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEG
            +   V    E    A ++  P A+   + G     + P + + K+N+DA    + N+ G+G  IR  +G +     K  + H  + Y EAEA+  G
Subjt:  ----DELVVNLNKEEASWAEEQRLPEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEG

Query:  MKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA
        +       +    +  K +++ESDS EVV L+ +     ++I  ++ EI+ +  + +  S +   R  N +AHSLA+ A
Subjt:  MKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA

XP_015384077.1 uncharacterized protein LOC107176301 [Citrus sinensis]3.7e-2728.65Show/hide
Query:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK
        V + I  D  WN   ++  F   D + +LK+    S+KED ++W  D KG ++VK  Y +A   +   +AS S  S +   W ++WSL+   ++KI +W+
Subjt:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK

Query:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGLFPN-LTHVFSPRRDWWSSKDYWDELVVNLNKEEASWAEEQRLPEA-EAPR
          +N LPT EN+  R  + + +C  C +  E   H    CK +K+ W  L  + +  +F  R    SSK               S A+ + + +A +  R
Subjt:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGLFPN-LTHVFSPRRDWWSSKDYWDELVVNLNKEEASWAEEQRLPEA-EAPR

Query:  EPGES----------RRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEGMKEISRRKEAGGGSMTKPLVI
          G +           +   P +  +K+N DA       + G+G  IR S  + +  G  Q      + Y EAEAI  G+K ++RR      +    L+I
Subjt:  EPGES----------RRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEGMKEISRRKEAGGGSMTKPLVI

Query:  ESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAAAFHDT
        ESD  EVV+L+ +   +   +  II+EI++   T     V    R  N+ AHSLA+ A   +T
Subjt:  ESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAAAFHDT

XP_024033483.1 uncharacterized protein LOC112095606 [Citrus clementina]6.8e-2928.65Show/hide
Query:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK
        V + I ++ QW+   I   F   DAD I+++P  +S KED IIW  D KG +SVK  Y  A S +       S   K +  W  IW+L    +++I  W+
Subjt:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK

Query:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWE--GLFPNLTHVFSPRRDWWSSKDYWDELVVNLNKEEASWAEEQRLPEAEAPR
          +N LP+ EN+  R I+    C + +   EN  H    CK +++ W+   L  ++         +   ++    LV        ++   Q+  +A    
Subjt:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWE--GLFPNLTHVFSPRRDWWSSKDYWDELVVNLNKEEASWAEEQRLPEAEAPR

Query:  EPGESRRLDSPDQQ-YWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEGMKEISRRKEAGGGSMTKPLVIESDSTEVVK
        +  +++++ +P Q  + K+N DA    + ++ G+G  IR   G++I A  K  + H  + + EAEA+  G+ +I+R       + TK L++ESD+  VV 
Subjt:  EPGESRRLDSPDQQ-YWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEGMKEISRRKEAGGGSMTKPLVIESDSTEVVK

Query:  LIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA
        L+ +     ++I  II EI+++  T ++ S+    R  N +AHSLA+ A
Subjt:  LIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA

XP_035551510.1 uncharacterized protein LOC118349853 [Juglans regia]8.0e-3028.53Show/hide
Query:  VKVEFKYKRVCDRIRDDG-QWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDC
        V+V  +  RVC+ +   G  WN +L+RE+FL  +A+ I  +P  K   EDK+IWG   +G F+VK  Y+L + ++  +K   S + K + +WK+IWSL  
Subjt:  VKVEFKYKRVCDRIRDDG-QWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDC

Query:  QPRVKITVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGLFPNLTHVFSPRRDWWSSKD----YWDELVVNLNKEEA---
           VK  +WK+  + L T +N+  R ++ +  C +C+++ E   HI W C  ++  W G F  +       + W + +D    +WD+ +  L  E+    
Subjt:  QPRVKITVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGLFPNLTHVFSPRRDWWSSKD----YWDELVVNLNKEEA---

Query:  ----------SWAEEQRLPEAEAPRE-------PGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVE
                    A+ Q +   E PR+        G       PDQ  +K N DA    +S   G+G  IR  +G ++        R  P    +    V 
Subjt:  ----------SWAEEQRLPEAEAPRE-------PGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVE

Query:  GMKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVN--SVMKCSRLSNILAHSLARAA
            +    E G   +T     E D+  VVK + S  EDL+    II++IK+  S +     +V    R  N +AH LA+ A
Subjt:  GMKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVN--SVMKCSRLSNILAHSLARAA

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein2.0e-2627.46Show/hide
Query:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK
        V + I ++ +W   LI++ F   DA+ I ++    S K D+I+W  D KG++SVK  Y +A   +   + S S  +  +  W  IWSL+   ++KI +WK
Subjt:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK

Query:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFW--------------EGLFPNLTHVFSPRRD----------W--WSSKDYW---
          +N LPT EN+  R +V   +C  C+ KKE+  H    CK +K+ W              + L   L  + + R            W  W +++ +   
Subjt:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFW--------------EGLFPNLTHVFSPRRD----------W--WSSKDYW---

Query:  ---DELVVNLNKEEASWAEEQRL----PEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAI
            +  +++ K EA      R+     +A A   P +  +   P Q ++K N DA    + N  G+G  IR  SG++I A     + H  +   EA A+
Subjt:  ---DELVVNLNKEEASWAEEQRL----PEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAI

Query:  VEGMKEISRRKEAGGGSMTKPLVIESDSTEVVKLIF----SDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA
          G++ +         +   PL++E+D  +VV  +     S +E    ISEI  +++S +S +E   + K  R  N +AH+LA+ A
Subjt:  VEGMKEISRRKEAGGGSMTKPLVIESDSTEVVKLIF----SDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA

A0A2H5Q972 Uncharacterized protein (Fragment)1.8e-2727.97Show/hide
Query:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK
        V + I  +  W+ +LI   F   DAD I ++P  + ++ED++IW     G ++VK  Y  A +       S S+ SK E  W  IWSL    +++I VW+
Subjt:  VCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWK

Query:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWE-GLFPN------------LTHVFSPRRD-----------W--WSSKDYW---
          +N LP+ EN+  R IV    C LC+   EN  H   +CK +K+ W   LF N            L H     R            W  W++++ W   
Subjt:  IVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWE-GLFPN------------LTHVFSPRRD-----------W--WSSKDYW---

Query:  ----DELVVNLNKEEASWAEEQRLPEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEG
            +   V    E    A ++  P A+   + G     + P + + K+N+DA    + N+ G+G  IR  +G +     K  + H  + Y EAEA+  G
Subjt:  ----DELVVNLNKEEASWAEEQRLPEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEG

Query:  MKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA
        +       +    +  K +++ESDS EVV L+ +     ++I  ++ EI+ +  + +  S +   R  N +AHSLA+ A
Subjt:  MKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA

A0A2N9H1N4 RNase H domain-containing protein5.2e-2726.19Show/hide
Query:  WNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWKIVQNALPTVE
        W   L++E+FL  +A  IL +P    N  D ++WG+   G +SVK  YHL  +     ++  SD S+  ++WKS+WSL+  P+ +  +W+   N+LPT  
Subjt:  WNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWKIVQNALPTVE

Query:  NIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGL-------------FPNLTH----VFSPRRDWWSSKDYW-----------------DELVV
        N+ +R I+ +  C +C K+ E+  H  W CK  +  W+ +             F +L H    + S       S   W                 D  +V
Subjt:  NIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGL-------------FPNLTH----VFSPRRDWWSSKDYW-----------------DELVV

Query:  NLNKEEASWAEEQRLPEAEAPREPGESR--RLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEGMKEISRR
           ++  S  +E +  E + P++P  S   + + P Q  +K+N D   F DSN  G+G  IR   G ++G+  ++    + ++ +EA A       I   
Subjt:  NLNKEEASWAEEQRLPEAEAPREPGESR--RLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEGMKEISRR

Query:  KEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAAAFHDTF
        ++ G    TK + +E DS  VV+ +          + II++ K ++ +++    +  +R  N++AH LA+ A  +  F
Subjt:  KEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAAAFHDTF

A0A6P9ERU0 uncharacterized protein LOC1183498533.9e-3028.53Show/hide
Query:  VKVEFKYKRVCDRIRDDG-QWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDC
        V+V  +  RVC+ +   G  WN +L+RE+FL  +A+ I  +P  K   EDK+IWG   +G F+VK  Y+L + ++  +K   S + K + +WK+IWSL  
Subjt:  VKVEFKYKRVCDRIRDDG-QWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDC

Query:  QPRVKITVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGLFPNLTHVFSPRRDWWSSKD----YWDELVVNLNKEEA---
           VK  +WK+  + L T +N+  R ++ +  C +C+++ E   HI W C  ++  W G F  +       + W + +D    +WD+ +  L  E+    
Subjt:  QPRVKITVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGLFPNLTHVFSPRRDWWSSKD----YWDELVVNLNKEEA---

Query:  ----------SWAEEQRLPEAEAPRE-------PGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVE
                    A+ Q +   E PR+        G       PDQ  +K N DA    +S   G+G  IR  +G ++        R  P    +    V 
Subjt:  ----------SWAEEQRLPEAEAPRE-------PGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVE

Query:  GMKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVN--SVMKCSRLSNILAHSLARAA
            +    E G   +T     E D+  VVK + S  EDL+    II++IK+  S +     +V    R  N +AH LA+ A
Subjt:  GMKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVN--SVMKCSRLSNILAHSLARAA

I6M4U0 Putative ZmL1 non-LTR retrotransposon protein1.6e-2827.56Show/hide
Query:  GQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKED---SIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWKIVQNA
        G W+  L+R+ FL  DAD IL +P ++   ED + W  DPKG+FSVK  Y LA  + D   +  AS S   + E VWKSIW+++   ++K+ +W++  N+
Subjt:  GQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKED---SIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWKIVQNA

Query:  LPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGL---------------FPNLTHVFSPRRD-----------WWSSKDYWDELVVNLN
         P   NI  RGI    LC +C +  E+G H+F  CK  K+ W  L                  +  + + R +           WWS+++        + 
Subjt:  LPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGL---------------FPNLTHVFSPRRD-----------WWSSKDYWDELVVNLN

Query:  KEEASWAEE------------QRLPEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEG
         E     EE            ++L   ++ R P  + +   P   ++K+N D ++   S +G  G  IRG  G  + AG   +   +   + E+ A ++G
Subjt:  KEEASWAEE------------QRLPEAEAPREPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEG

Query:  MKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKS-MSSTIEVNSVMKCSRLSNILAHSLARAAA
        +       E       + ++IE+D+  +   + S   DL+ +  +  EI+S M S      V KC R  N++A  LA   A
Subjt:  MKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKS-MSSTIEVNSVMKCSRLSNILAHSLARAAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.7e-0424.21Show/hide
Query:  WAEEQRLP-EAEAPR-EPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEGMKEISRRKEAGGGSM
        W+  + L  +A  P+ E   S +  +P  Q+ K N+DATW  ++   G+GW +R  SG ++  G + + R   +   E EA+   +  +SR         
Subjt:  WAEEQRLP-EAEAPR-EPGESRRLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEGMKEISRRKEAGGGSM

Query:  TKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA---AFHDTFVFFVLPSLSLWSKEVVV
         K ++ ESD+  +V L+ SD +    +   +++I+ +    E        R  N +A  +AR +   + +D  +F ++P    W +  ++
Subjt:  TKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAA---AFHDTFVFFVLPSLSLWSKEVVV

AT3G09510.1 Ribonuclease H-like superfamily protein2.2e-0925.55Show/hide
Query:  WNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWKIVQNALPTVE
        W+   I +    SD   I ++   KS K DKIIW  +  G ++V+  Y L      +   + +       +   IW+L   P++K  +W+ +  AL T E
Subjt:  WNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKITVWKIVQNALPTVE

Query:  NIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFW
         +  RG+  +  C  C ++ E+  H  + C  +   W
Subjt:  NIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFW

AT3G25270.1 Ribonuclease H-like superfamily protein7.0e-0833.33Show/hide
Query:  IWSLDCQPRVKITVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFW
        IW L   P++K  +WK++  AL T +N+K R I  +  C+ C ++ E  +H+F++C  +++ W
Subjt:  IWSLDCQPRVKITVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFW

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.8e-0637.7Show/hide
Query:  IWSLDCQPRVKITVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKR
        IWSL   P++K+ +WK + NALP    + +R I     C  CR   E   HI +NC  ++R
Subjt:  IWSLDCQPRVKITVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKR

AT4G29090.1 Ribonuclease H-like superfamily protein9.5e-1321.81Show/hide
Query:  RVCDRIRDDG-QWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKE--EKVWKSIWSLDCQPRVKI
        +V D I + G +W  D+I  +F   +   I ++        D   W     G ++VK  Y +  ++  + ++S  + S+     +++ IW     P+++ 
Subjt:  RVCDRIRDDG-QWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKE--EKVWKSIWSLDCQPRVKI

Query:  TVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFW--------------EGLFPNLTHVF---SPRRDW--------WSSKDYW
         +WK + N+LP    +  R +     C  C   KE   H+ + C  ++  W              + ++ NL  VF   +    W        W     W
Subjt:  TVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFW--------------EGLFPNLTHVF---SPRRDW--------WSSKDYW

Query:  ---DELVVN---------LNKEEASWAEEQRLPEAEA-PREPGESR----RLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHN
           +ELV           L + E    E +   EAE+   +P  +R    R   P  Q+ K N+DATW  D+   G+GW +R   G +   G + + +  
Subjt:  ---DELVVN---------LNKEEASWAEEQRLPEAEA-PREPGESR----RLDSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHN

Query:  PIKYLEAEAIVEGMKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAAAF---HDT
         +   E EA+   +  +SR            ++ ESDS  +++++ +D E    +   I +++ + S       +   R  N LA  +AR +     +D 
Subjt:  PIKYLEAEAIVEGMKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEIKSMSSTIEVNSVMKCSRLSNILAHSLARAAAF---HDT

Query:  FVFFVLPS
         ++ ++PS
Subjt:  FVFFVLPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCTCTTTGGGTAAAAGTTGAGTTCAAATATAAGAGGGTCTGTGATCGTATTAGAGATGACGGACAGTGGAATGGGGACTTAATTCGTGAGGTGTTCCTCTTGTC
TGATGCCGATAACATCCTCAAAATGCCTAGGAGAAAATCTAATAAAGAGGATAAAATCATTTGGGGCAAAGACCCGAAAGGCTCCTTTTCGGTAAAAAGAGTGTACCACT
TAGCAAAGAGCAAAGAAGATTCTATAAAAGCTTCGGGCTCGGACAAATCTAAGGAGGAAAAAGTTTGGAAATCCATCTGGAGCCTCGATTGCCAACCAAGAGTAAAGATC
ACAGTGTGGAAAATTGTTCAGAATGCTCTTCCTACGGTAGAAAATATTAAGAACCGAGGAATTGTTACTAATGATCTATGTTATTTGTGCAGGAAAAAAAAAGAGAACGG
GGAGCATATCTTCTGGAACTGTAAAGTTTCTAAGAGATTTTGGGAGGGCCTATTTCCAAATCTCACTCATGTTTTCTCTCCTCGTAGGGACTGGTGGAGCTCGAAAGATT
ACTGGGATGAGCTGGTAGTAAATCTTAACAAGGAAGAAGCTAGTTGGGCGGAGGAACAGAGATTACCTGAAGCCGAAGCCCCCAGAGAACCAGGCGAGTCACGCAGGCTG
GATTCCCCGGACCAACAATATTGGAAGCTCAATTCGGACGCAACGTGGTTCGATGATTCAAACATTGGAGGTGTTGGTTGGGCCATCCGTGGCTCTTCGGGGTCTCTAAT
AGGGGCGGGAGGGAAACAAATTCAGAGGCATAACCCCATTAAATATCTAGAAGCTGAAGCGATTGTTGAGGGGATGAAGGAAATCTCTAGAAGGAAGGAGGCGGGAGGCG
GATCGATGACTAAGCCTTTGGTTATTGAGTCCGATTCTACGGAGGTCGTCAAACTCATTTTCAGTGATTCTGAGGATCTGGCGAAAATCTCAGAGATCATCGATGAAATT
AAATCAATGTCCTCGACCATTGAAGTGAATTCTGTCATGAAATGCTCTAGATTGAGCAACATTCTAGCGCACAGCCTTGCGCGCGCTGCTGCTTTTCACGACACTTTTGT
ATTTTTTGTGCTTCCGTCCTTGAGTCTGTGGAGCAAGGAGGTTGTTGTCAGGGAAGAGAGCTTCCCTTTTTGGTTTTCTTCTTTATTAGCTGATAACAACGTTGTACCTA
CTTTTCCCGTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCTCTTTGGGTAAAAGTTGAGTTCAAATATAAGAGGGTCTGTGATCGTATTAGAGATGACGGACAGTGGAATGGGGACTTAATTCGTGAGGTGTTCCTCTTGTC
TGATGCCGATAACATCCTCAAAATGCCTAGGAGAAAATCTAATAAAGAGGATAAAATCATTTGGGGCAAAGACCCGAAAGGCTCCTTTTCGGTAAAAAGAGTGTACCACT
TAGCAAAGAGCAAAGAAGATTCTATAAAAGCTTCGGGCTCGGACAAATCTAAGGAGGAAAAAGTTTGGAAATCCATCTGGAGCCTCGATTGCCAACCAAGAGTAAAGATC
ACAGTGTGGAAAATTGTTCAGAATGCTCTTCCTACGGTAGAAAATATTAAGAACCGAGGAATTGTTACTAATGATCTATGTTATTTGTGCAGGAAAAAAAAAGAGAACGG
GGAGCATATCTTCTGGAACTGTAAAGTTTCTAAGAGATTTTGGGAGGGCCTATTTCCAAATCTCACTCATGTTTTCTCTCCTCGTAGGGACTGGTGGAGCTCGAAAGATT
ACTGGGATGAGCTGGTAGTAAATCTTAACAAGGAAGAAGCTAGTTGGGCGGAGGAACAGAGATTACCTGAAGCCGAAGCCCCCAGAGAACCAGGCGAGTCACGCAGGCTG
GATTCCCCGGACCAACAATATTGGAAGCTCAATTCGGACGCAACGTGGTTCGATGATTCAAACATTGGAGGTGTTGGTTGGGCCATCCGTGGCTCTTCGGGGTCTCTAAT
AGGGGCGGGAGGGAAACAAATTCAGAGGCATAACCCCATTAAATATCTAGAAGCTGAAGCGATTGTTGAGGGGATGAAGGAAATCTCTAGAAGGAAGGAGGCGGGAGGCG
GATCGATGACTAAGCCTTTGGTTATTGAGTCCGATTCTACGGAGGTCGTCAAACTCATTTTCAGTGATTCTGAGGATCTGGCGAAAATCTCAGAGATCATCGATGAAATT
AAATCAATGTCCTCGACCATTGAAGTGAATTCTGTCATGAAATGCTCTAGATTGAGCAACATTCTAGCGCACAGCCTTGCGCGCGCTGCTGCTTTTCACGACACTTTTGT
ATTTTTTGTGCTTCCGTCCTTGAGTCTGTGGAGCAAGGAGGTTGTTGTCAGGGAAGAGAGCTTCCCTTTTTGGTTTTCTTCTTTATTAGCTGATAACAACGTTGTACCTA
CTTTTCCCGTTTCTTAA
Protein sequenceShow/hide protein sequence
MTPLWVKVEFKYKRVCDRIRDDGQWNGDLIREVFLLSDADNILKMPRRKSNKEDKIIWGKDPKGSFSVKRVYHLAKSKEDSIKASGSDKSKEEKVWKSIWSLDCQPRVKI
TVWKIVQNALPTVENIKNRGIVTNDLCYLCRKKKENGEHIFWNCKVSKRFWEGLFPNLTHVFSPRRDWWSSKDYWDELVVNLNKEEASWAEEQRLPEAEAPREPGESRRL
DSPDQQYWKLNSDATWFDDSNIGGVGWAIRGSSGSLIGAGGKQIQRHNPIKYLEAEAIVEGMKEISRRKEAGGGSMTKPLVIESDSTEVVKLIFSDSEDLAKISEIIDEI
KSMSSTIEVNSVMKCSRLSNILAHSLARAAAFHDTFVFFVLPSLSLWSKEVVVREESFPFWFSSLLADNNVVPTFPVS