; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006211 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006211
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr6:39249934..39250566
RNA-Seq ExpressionLag0006211
SyntenyLag0006211
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.0e-2036.82Show/hide
Query:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID
        T + + L P A VW+ F +SR LPTTH   VSK+R+LL+ S+L   SI+VG+++  EI AC+ RK G LFFP+LIT LC  A+     NEE L   G ID
Subjt:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID

Query:  SASITRLHGDNKGRS------------STNMVCG--------VEEILRQQR----RMMRRMEHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQF
        + ++ R+  +    S            S+N   G        +E+ L QQ      MM  ++H+  QQ+ +  Y+  RD+A+ K  +  F      FP F
Subjt:  SASITRLHGDNKGRS------------STNMVCG--------VEEILRQQR----RMMRRMEHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQF

Query:  P
        P
Subjt:  P

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.9e-1936.41Show/hide
Query:  LKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIIDSASITR
        L P A VW+ F +SR LPTTH   VSK+R+LL++S+L   SI+VG+++  EI AC+ RK G LFFP+LIT LC  A+     NEE L   G ID+ ++ R
Subjt:  LKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIIDSASITR

Query:  LHGDNKGR------------SSTNMVCG--------VEEILRQQR----RMMRRMEHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQFP
        +  + +              +S++   G        +E+ L QQ      MM  ++H+  QQ+ +  Y+  RD+A+ K  +  F      FP FP
Subjt:  LHGDNKGR------------SSTNMVCG--------VEEILRQQR----RMMRRMEHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQFP

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]8.0e-1839.87Show/hide
Query:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID
        T L + L P A VW+ F +SR LPTTH   VSKERVLL++S+L   SI+VG+++ +EI A + RK G LFFP+LIT +C  A+     NEE L   G ID
Subjt:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID

Query:  SASITRL---------HGDNKGRSSTNMVCGVEEILRQQRRMMRRMEHSESQQ
        + ++ R+         H  +  R +        E L+Q + + +R+   E QQ
Subjt:  SASITRL---------HGDNKGRSSTNMVCGVEEILRQQRRMMRRMEHSESQQ

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]4.0e-1748.57Show/hide
Query:  LAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIIDSA
        L + L P A VW+ F +SR LPTTH  +VSKE VLL++S+L   SI+VG+++ +EI AC+ RK G LFFP+LIT +C  A+     NEE L   G ID+ 
Subjt:  LAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIIDSA

Query:  SITRL
        ++ R+
Subjt:  SITRL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]8.6e-2037.31Show/hide
Query:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID
        T + + L P A VW+ F +SR LPTTH  +VSK+R+LL+ S+L   SI+VG+++  EI AC+ +K G LFFP+LIT LC  A   V  NEE L   G ID
Subjt:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID

Query:  SASITRLHGDNKGRS------------STNMVCGVEEILRQQRRMMRRM---EHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQFPA
        + ++ R+  +    S            S++   G  ++L+Q + + +R+   EH+  QQ+ +  Y+  RD+A+ K  +  F    +P P FPA
Subjt:  SASITRLHGDNKGRS------------STNMVCGVEEILRQQRRMMRRM---EHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQFPA

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)4.9e-2136.82Show/hide
Query:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID
        T + + L P A VW+ F +SR LPTTH   VSK+R+LL+ S+L   SI+VG+++  EI AC+ RK G LFFP+LIT LC  A+     NEE L   G ID
Subjt:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID

Query:  SASITRLHGDNKGRS------------STNMVCG--------VEEILRQQR----RMMRRMEHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQF
        + ++ R+  +    S            S+N   G        +E+ L QQ      MM  ++H+  QQ+ +  Y+  RD+A+ K  +  F      FP F
Subjt:  SASITRLHGDNKGRS------------STNMVCG--------VEEILRQQR----RMMRRMEHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQF

Query:  P
        P
Subjt:  P

A0A2P5CEY2 Uncharacterized protein9.3e-2036.41Show/hide
Query:  LKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIIDSASITR
        L P A VW+ F +SR LPTTH   VSK+R+LL++S+L   SI+VG+++  EI AC+ RK G LFFP+LIT LC  A+     NEE L   G ID+ ++ R
Subjt:  LKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIIDSASITR

Query:  LHGDNKGR------------SSTNMVCG--------VEEILRQQR----RMMRRMEHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQFP
        +  + +              +S++   G        +E+ L QQ      MM  ++H+  QQ+ +  Y+  RD+A+ K  +  F      FP FP
Subjt:  LHGDNKGR------------SSTNMVCG--------VEEILRQQR----RMMRRMEHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQFP

A0A2P5CPE8 Uncharacterized protein3.9e-1839.87Show/hide
Query:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID
        T L + L P A VW+ F +SR LPTTH   VSKERVLL++S+L   SI+VG+++ +EI A + RK G LFFP+LIT +C  A+     NEE L   G ID
Subjt:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID

Query:  SASITRL---------HGDNKGRSSTNMVCGVEEILRQQRRMMRRMEHSESQQ
        + ++ R+         H  +  R +        E L+Q + + +R+   E QQ
Subjt:  SASITRL---------HGDNKGRSSTNMVCGVEEILRQQRRMMRRMEHSESQQ

A0A2P5CXU3 Uncharacterized protein (Fragment)1.9e-1748.57Show/hide
Query:  LAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIIDSA
        L + L P A VW+ F +SR LPTTH  +VSKE VLL++S+L   SI+VG+++ +EI AC+ RK G LFFP+LIT +C  A+     NEE L   G ID+ 
Subjt:  LAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIIDSA

Query:  SITRL
        ++ R+
Subjt:  SITRL

A0A2P5DXM3 Uncharacterized protein4.2e-2037.31Show/hide
Query:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID
        T + + L P A VW+ F +SR LPTTH  +VSK+R+LL+ S+L   SI+VG+++  EI AC+ +K G LFFP+LIT LC  A   V  NEE L   G ID
Subjt:  TLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIID

Query:  SASITRLHGDNKGRS------------STNMVCGVEEILRQQRRMMRRM---EHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQFPA
        + ++ R+  +    S            S++   G  ++L+Q + + +R+   EH+  QQ+ +  Y+  RD+A+ K  +  F    +P P FPA
Subjt:  SASITRLHGDNKGRS------------STNMVCGVEEILRQQRRMMRRM---EHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQFPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGAACTCAGTTCGAACACTATTGGCTGCATACCTTAAGCCCGAAGCAAACGTTTGGCACACCTTTGCAAGGAGTAGGTTTCTCCCCACCACTCATGACACCAT
GGTGTCTAAAGAAAGAGTTCTCTTAATTTTTTCCATCTTGAAAATCCTGAGCATTGACGTGGGGAAGCTCTTGGCAAAGGAGATTGTGGCATGTTCAAAAAGGAAGGTAG
GAAGATTGTTTTTCCCAAATCTGATTACTGCATTATGTTTGAGGGCTCAAGTCGAGGTGGATGAGAATGAAGAAATTTTAATGGGCAAAGGAATCATAGATTCAGCATCT
ATAACAAGATTGCACGGGGATAATAAAGGGAGGTCAAGCACAAATATGGTTTGTGGGGTTGAGGAGATTTTAAGGCAGCAGAGAAGGATGATGAGGCGAATGGAACACAG
TGAGAGTCAGCAAAAGACTTATTCGCAATATGCTCATCTTAGGGACTCTGCCATGGTGAAAACATTTGAATATGGCTTTGAGGAGCTTCCTCAGCCATTTCCTCAATTCC
CAGCATGTTTATTTGACCTGTGGTGCCCTTCCCCATCTCCCAGTGGGAATGAAAATGATGCTGATGATGATCAAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGAACTCAGTTCGAACACTATTGGCTGCATACCTTAAGCCCGAAGCAAACGTTTGGCACACCTTTGCAAGGAGTAGGTTTCTCCCCACCACTCATGACACCAT
GGTGTCTAAAGAAAGAGTTCTCTTAATTTTTTCCATCTTGAAAATCCTGAGCATTGACGTGGGGAAGCTCTTGGCAAAGGAGATTGTGGCATGTTCAAAAAGGAAGGTAG
GAAGATTGTTTTTCCCAAATCTGATTACTGCATTATGTTTGAGGGCTCAAGTCGAGGTGGATGAGAATGAAGAAATTTTAATGGGCAAAGGAATCATAGATTCAGCATCT
ATAACAAGATTGCACGGGGATAATAAAGGGAGGTCAAGCACAAATATGGTTTGTGGGGTTGAGGAGATTTTAAGGCAGCAGAGAAGGATGATGAGGCGAATGGAACACAG
TGAGAGTCAGCAAAAGACTTATTCGCAATATGCTCATCTTAGGGACTCTGCCATGGTGAAAACATTTGAATATGGCTTTGAGGAGCTTCCTCAGCCATTTCCTCAATTCC
CAGCATGTTTATTTGACCTGTGGTGCCCTTCCCCATCTCCCAGTGGGAATGAAAATGATGCTGATGATGATCAAGAAGATTGA
Protein sequenceShow/hide protein sequence
MARNSVRTLLAAYLKPEANVWHTFARSRFLPTTHDTMVSKERVLLIFSILKILSIDVGKLLAKEIVACSKRKVGRLFFPNLITALCLRAQVEVDENEEILMGKGIIDSAS
ITRLHGDNKGRSSTNMVCGVEEILRQQRRMMRRMEHSESQQKTYSQYAHLRDSAMVKTFEYGFEELPQPFPQFPACLFDLWCPSPSPSGNENDADDDQED