; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006229 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006229
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr6:39658649..39660055
RNA-Seq ExpressionLag0006229
SyntenyLag0006229
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.3e-3524.34Show/hide
Query:  SSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI-STSASDK
        S+ S+ W+  +WG  ++K+G+R  +G+   + ++ D WIPRP+TF+ +S P++   + VVAD I   N+W + +L Q   KED++ I+++ + S    D+
Subjt:  SSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI-STSASDK

Query:  WVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVESRCGS---------------------------------------CPVCREAMETTDPALFLCSRA
         +WH+DK G+Y+VKSGY+L +  +      S+   SR                                          C  C+  +ET    L  C  A
Subjt:  WVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVESRCGS---------------------------------------CPVCREAMETTDPALFLCSRA

Query:  REVWEGILPWM-------NEEFWIPMDIQDRWLSLGDCQSQRLDLISIGAWAIWNDRNNIHHQRLVPN---VQTRSEWILEYLEEFQNANPVRGIVNQGV
        R++W+ + P +       N++F+    IQ+ W      ++   +L+ +  W IW+ RN    +    +   +  +++ +L+  +       V G  ++G+
Subjt:  REVWEGILPWM-------NEEFWIPMDIQDRWLSLGDCQSQRLDLISIGAWAIWNDRNNIHHQRLVPN---VQTRSEWILEYLEEFQNANPVRGIVNQGV

Query:  DDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETC
        D  +        + ++ DAA    +  VG+G + +D +G +  V             AEAE +  GL  A  +    L V SD    ++ +       T 
Subjt:  DDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETC

Query:  LATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQS-WLGNYP
        +   + D++   + F+ ++F    R  N +AH LA   L   S   W+G +P
Subjt:  LATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQS-WLGNYP

XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]3.5e-3627.37Show/hide
Query:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI
        S LD       S  W+  +WG  LL  G+RR +GN  S + F DPW+ RP +F  L   R    ++ V ++IT    W+   + Q     D+  I+ +P+
Subjt:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI

Query:  ST-SASDKWVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVESRC---------------------------------------GSCPVCREAMETTDP
        S    +D W WHY+  G YTVKSGYKL    +++ S+SS +V  +                                         +CP+C  A ++   
Subjt:  ST-SASDKWVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVESRC---------------------------------------GSCPVCREAMETTDP

Query:  ALFLCSRAREVWE----GILPWMNEEFWIPMDIQDRWLSLGD-CQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPVRGIVN
        A+F C  A+EVWE      L    EE    +  +D  L + +  +   +D++ +  W IW +RN + HQ+          W+  Y EE +NA        
Subjt:  ALFLCSRAREVWE----GILPWMNEEFWIPMDIQDRWLSLGD-CQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPVRGIVN

Query:  QGVDDVRRILQG-------VEEI----IMHCDAAYDEINGSVGIG--LVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDS
          V + R I +G       VEE+     +  DAA  +    +G+G  ++  + +    + K L  I  +S L AEA  ++ GL +A++       VL+DS
Subjt:  QGVDDVRRILQG-------VEEI----IMHCDAAYDEINGSVGIG--LVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDS

Query:  LTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQ-SWL
         + ++ +  + +    L   I D +E+ Q F  ++  H  R+ N  AH LA   L    + SWL
Subjt:  LTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQ-SWL

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]8.9e-5631.68Show/hide
Query:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI
        S+L  S +S SSYFWKGF+WG DLL +G+R  +GN  +IK FSDPW+PRP+TFK L    +   D  VA FIT    WD+  +      ED D I+ +PI
Subjt:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI

Query:  ST-SASDKWVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVE---------------------------------------SRCGSCPVCREAMETTDP
        S+ +  D W+WHYDK G Y+V+SGYKL +     A+++S                                               +C +C +  E+   
Subjt:  ST-SASDKWVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVE---------------------------------------SRCGSCPVCREAMETTDP

Query:  ALFLCSRAREVWEGILPWMN----EEFWIPMDIQDRWLSLGD-CQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLE-----EFQNANPV
        A F C RAR++W  + P++     E+    +   + W SL +  + + L+L +I  W IWNDRN++ H + V  V+ + EW+  +L+     +  N +P 
Subjt:  ALFLCSRAREVWEGILPWMN----EEFWIPMDIQDRWLSLGD-CQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLE-----EFQNANPV

Query:  RGIVNQGVDDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVR
            ++ V    R    V  + ++ DAA      S   G + +D   +L    ++     +SPL AE   +L+GL FA +     L V SDSL  I+ +R
Subjt:  RGIVNQGVDDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVR

Query:  KKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQS--QSWLGNYPNWI
         ++         + +I+ +   F  I F H+ R  NR AH LA  G+   S   +WL N+P W+
Subjt:  KKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQS--QSWLGNYPNWI

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.4e-3728.09Show/hide
Query:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI
        S L     +++SY W+  +WG  ++K+G+R  +GN   I +FSD W+PRP TF+ +  P S     VVAD I   NQWD  KL Q     D  EI+++P+
Subjt:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI

Query:  -STSASDKWVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVESRCGS---------------------------------------CPVCREAMETTDP
         +  A D+ +WHYDK G Y+VKSGY+L ++     S S  E   +  S                                       C  C+ ++ET   
Subjt:  -STSASDKWVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVESRCGS---------------------------------------CPVCREAMETTDP

Query:  ALFLCSRAREVWEGILPWMNEEFWIP---MDIQDRWLSL----GDCQSQRLDLISIGAWAIWNDRNN--IHHQRLVPNVQ-TRSEWILEYLEEFQNANPV
        AL  C  AR++      W+   F  P    + QD + +L     + +   L+L+    W+ W  RN      + L P +   ++E +L   +  +   P 
Subjt:  ALFLCSRAREVWEGILPWMNEEFWIP---MDIQDRWLSL----GDCQSQRLDLISIGAWAIWNDRNN--IHHQRLVPNVQ-TRSEWILEYLEEFQNANPV

Query:  RGIVNQGVDDVRR-ILQGVEEII-MHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKT
        +  ++  + + ++  L   + +  ++ DAA++  N S G+G V +D  G +        +   S   AEAE VL GL  AR+  +  L + SD L  ++ 
Subjt:  RGIVNQGVDDVRR-ILQGVEEII-MHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKT

Query:  VRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQ-SWLGNYPNWIHSMSK
        V       + +  TI  I+   + F+ +   H  RH N  AH LA + L   S   WLGN P  ++   K
Subjt:  VRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQ-SWLGNYPNWIHSMSK

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]4.9e-3827.35Show/hide
Query:  SSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIS-TSASD
        S  SS  W+G +WG +LL +G+   +G+   +    D WIP    FK L    S     +VAD+IT+T +WD+  LH      D+D I+ +P+S  S  D
Subjt:  SSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIS-TSASD

Query:  KWVWHYDKMGKYTVKSGYKL-CIKHSQEASASSAEVES--------------------------------------RCGSCPVCREAMETTDPALFLCSR
        +W WHYD  G YTVKSGY L C   +++ S+SS   E+                                         +C +C  A E+   ALF C  
Subjt:  KWVWHYDKMGKYTVKSGYKL-CIKHSQEASASSAEVES--------------------------------------RCGSCPVCREAMETTDPALFLCSR

Query:  AREVWEGI---LPWMNEEFWIPMDIQDRWLSLGDCQSQ-RLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNAN----PVRGIVNQGVD
        A+ VW+     L +    F   M   D  L L    ++  L+ +    W IW+DRNN  H + + +    S     YL  F +      P    V     
Subjt:  AREVWEGI---LPWMNEEFWIPMDIQDRWLSLGDCQSQ-RLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNAN----PVRGIVNQGVD

Query:  DVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCL
         V+ +      + M+ DAA D     +GIG++ +D  G +    +   +        EA+ +  GL +A+ L++Q   V +D L  +  ++ K    +  
Subjt:  DVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCL

Query:  ATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQS-WLGNYPNWIHSM
           + DI     SF      H  R  N+ AH LA   L   +   W+   P+ I S+
Subjt:  ATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQS-WLGNYPNWIHSM

TrEMBL top hitse value%identityAlignment
A0A5E4FZN9 PREDICTED: retrotransposon2.3e-3323.21Show/hide
Query:  LDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIST
        L+    ++ S+ W+   WG +LL +G+R  +GN +SI++++D W+P PS FKI+S P+      +V D  T + QW++  L  +   ++VD  +++P+++
Subjt:  LDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIST

Query:  SAS-DKWVWHYDKMGKYTVKSGYKL-CIKHSQEASASSAEVESR-----------------------------CGS------------CPVCREAMETTD
         A  D  +WHY++ G Y+VKSGY+L C++  + +   S  V+                               CG             CP C    E+  
Subjt:  SAS-DKWVWHYDKMGKYTVKSGYKL-CIKHSQEASASSAEVESR-----------------------------CGS------------CPVCREAMETTD

Query:  PALFLCSRAREVWEGILPWMNE-EFWIPMDIQDRWLSLG-DCQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPVRGIVNQG
         A++LC  A+EVW     W N  E W     ++ W +L      +   L +   W +WN RN+   +            + +  +EF NAN +   ++  
Subjt:  PALFLCSRAREVWEGILPWMNE-EFWIPMDIQDRWLSLG-DCQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPVRGIVNQG

Query:  VDDVRRILQGVEE-----IIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKK
            +  L G          ++ D A    +   G+G+V ++  G           +       E    ++GL FA  +      +  D+   I ++   
Subjt:  VDDVRRILQGVEE-----IIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKK

Query:  VQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLH-YQSQSWLGNYPNWI
         +C       I ++  +  +FR +  +   R  N+ AH LA    H  +  +W+   P W+
Subjt:  VQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLH-YQSQSWLGNYPNWI

A0A6J1DX30 uncharacterized protein LOC1110248744.3e-5631.68Show/hide
Query:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI
        S+L  S +S SSYFWKGF+WG DLL +G+R  +GN  +IK FSDPW+PRP+TFK L    +   D  VA FIT    WD+  +      ED D I+ +PI
Subjt:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPI

Query:  ST-SASDKWVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVE---------------------------------------SRCGSCPVCREAMETTDP
        S+ +  D W+WHYDK G Y+V+SGYKL +     A+++S                                               +C +C +  E+   
Subjt:  ST-SASDKWVWHYDKMGKYTVKSGYKLCIKHSQEASASSAEVE---------------------------------------SRCGSCPVCREAMETTDP

Query:  ALFLCSRAREVWEGILPWMN----EEFWIPMDIQDRWLSLGD-CQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLE-----EFQNANPV
        A F C RAR++W  + P++     E+    +   + W SL +  + + L+L +I  W IWNDRN++ H + V  V+ + EW+  +L+     +  N +P 
Subjt:  ALFLCSRAREVWEGILPWMN----EEFWIPMDIQDRWLSLGD-CQSQRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLE-----EFQNANPV

Query:  RGIVNQGVDDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVR
            ++ V    R    V  + ++ DAA      S   G + +D   +L    ++     +SPL AE   +L+GL FA +     L V SDSL  I+ +R
Subjt:  RGIVNQGVDDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVR

Query:  KKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQS--QSWLGNYPNWI
         ++         + +I+ +   F  I F H+ R  NR AH LA  G+   S   +WL N+P W+
Subjt:  KKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQS--QSWLGNYPNWI

A0A803NGI9 Uncharacterized protein2.8e-3927.08Show/hide
Query:  LDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIST
        L  S +  SS  W+G  WG DLL +G+R  +G+  S++  SDPWIPR S F  +      +   +V+ +IT+ N+W++  L +     DVD I+ +P+S+
Subjt:  LDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIST

Query:  SA-SDKWVWHYDKMGKYTVKSGYKLC--IKHSQEASASSAE---VE------SRCGSCPVCREAMETTDPALFLCSRAREVWEGILPWMNEEFWIPMDIQ
        S+ SD+W+WH+    +YTV+SGY L   ++ S  +++S+ +   VE      +   +C +C  A E+ + ALFLC  A++VW      +N +    M   
Subjt:  SA-SDKWVWHYDKMGKYTVKSGYKLC--IKHSQEASASSAE---VE------SRCGSCPVCREAMETTDPALFLCSRAREVWEGILPWMNEEFWIPMDIQ

Query:  DRWLSLGDCQS-QRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWI--LEYLEEFQNANPVRGIVNQGVDDVRR---ILQGVEEIIMHCDAAYDEING
        D  + L   +S   ++ +    W +WNDRNN  H +  P +     W   + Y   FQ  +     +        +   I   ++++ M+ DAA D    
Subjt:  DRWLSLGDCQS-QRLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWI--LEYLEEFQNANPVRGIVNQGVDDVRR---ILQGVEEIIMHCDAAYDEING

Query:  SVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRH
         +G+G++ ++  G +    +      + P   EA+ +L G+ +A    +      SDSL  + ++       +     + DIK       ++   H  R 
Subjt:  SVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRH

Query:  YNRFAHKLAHVGLHYQSQ-SWLGNYPNWIHSM
         N+ AH LA   L       W    P+ I S+
Subjt:  YNRFAHKLAHVGLHYQSQ-SWLGNYPNWIHSM

A0A803NM27 Uncharacterized protein5.1e-4127.84Show/hide
Query:  LDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIST
        L  +    SS  W+GF WG +LLK+G+R  +GN   I   +DPWIP  S F  +    +      VAD+IT   +W+++KL+      DV+ I+ LP+S 
Subjt:  LDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIST

Query:  SA-SDKWVWHYDKMGKYTVKSGYKLCIKHSQE--ASASSAEV-------------------------------------ESRCGSCPVCREAMETTDPAL
         A SD WVWH    G+Y VKSGY +    + E   S SS  V                                          SC +C  A E+   A+
Subjt:  SA-SDKWVWHYDKMGKYTVKSGYKLCIKHSQE--ASASSAEV-------------------------------------ESRCGSCPVCREAMETTDPAL

Query:  FLCSRAREVWEGILPWMNEEFWIPMDIQDRWLSLGDCQSQ-RLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPV---RGIVNQGV
        F C  AR VW+      N +  + M I+D    + +C ++  L++I    W+IW+DRNN+ H ++       S     +L  FQ+A  +    G+     
Subjt:  FLCSRAREVWEGILPWMNEEFWIPMDIQDRWLSLGDCQSQ-RLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNANPV---RGIVNQGV

Query:  DDVRRILQGVEE--IIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCE
            R         + ++ DAA+D+    +G G + +D  GN+K   +        P   EA+ +   L +AR L  +   V +DSL  +  +RK     
Subjt:  DDVRRILQGVEE--IIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCE

Query:  TCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQ-SWLGNYPNWIHSMSKERYMF
        +     I+D++       T+   H  R  N+ AH LA   L   +  +WL ++P+ I S+  +  +F
Subjt:  TCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQ-SWLGNYPNWIHSMSKERYMF

A0A803PIB6 Uncharacterized protein2.4e-3827.35Show/hide
Query:  SSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIS-TSASD
        S  SS  W+G +WG +LL +G+   +G+   +    D WIP    FK L    S     +VAD+IT+T +WD+  LH      D+D I+ +P+S  S  D
Subjt:  SSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPIS-TSASD

Query:  KWVWHYDKMGKYTVKSGYKL-CIKHSQEASASSAEVES--------------------------------------RCGSCPVCREAMETTDPALFLCSR
        +W WHYD  G YTVKSGY L C   +++ S+SS   E+                                         +C +C  A E+   ALF C  
Subjt:  KWVWHYDKMGKYTVKSGYKL-CIKHSQEASASSAEVES--------------------------------------RCGSCPVCREAMETTDPALFLCSR

Query:  AREVWEGI---LPWMNEEFWIPMDIQDRWLSLGDCQSQ-RLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNAN----PVRGIVNQGVD
        A+ VW+     L +    F   M   D  L L    ++  L+ +    W IW+DRNN  H + + +    S     YL  F +      P    V     
Subjt:  AREVWEGI---LPWMNEEFWIPMDIQDRWLSLGDCQSQ-RLDLISIGAWAIWNDRNNIHHQRLVPNVQTRSEWILEYLEEFQNAN----PVRGIVNQGVD

Query:  DVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCL
         V+ +      + M+ DAA D     +GIG++ +D  G +    +   +        EA+ +  GL +A+ L++Q   V +D L  +  ++ K    +  
Subjt:  DVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKMQCLSVLSDSLTFIKTVRKKVQCETCL

Query:  ATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQS-WLGNYPNWIHSM
           + DI     SF      H  R  N+ AH LA   L   +   W+   P+ I S+
Subjt:  ATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQS-WLGNYPNWIHSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.5e-1321.67Show/hide
Query:  MSVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWI----PRPSTFKILSHPRSENADMVVADFITETNQ---WDIAKLHQVLGKEDV
        +S+LD       SY W   + G+ LLK+G R  +G+  +I++  D  +    PRP       +      +M + +          WD +K+ Q + + D 
Subjt:  MSVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWI----PRPSTFKILSHPRSENADMVVADFITETNQ---WDIAKLHQVLGKEDV

Query:  DEIVRLPISTSAS-DKWVWHYDKMGKYTVKSGYKLC--------------------------------IKH-----SQEASASSAEVESR----CGSCPV
          I R+ ++ S   DK +W+Y+  G+YTV+SGY L                                 +KH       +A A++  + +R      SCP 
Subjt:  DEIVRLPISTSAS-DKWVWHYDKMGKYTVKSGYKLC--------------------------------IKH-----SQEASASSAEVESR----CGSCPV

Query:  CREAMETTDPALFLCSRAREVWEGILPWMNEEFWIPMDIQDRWLSL-----GDCQSQRLDLISIG-AWAIWNDRNNIHHQR---------LVPNVQTRSE
        C    E+ + ALF C  A   W      +     +  D ++   ++         S    L+ +   W IW  RNN+   +         L    +T  +
Subjt:  CREAMETTDPALFLCSRAREVWEGILPWMNEEFWIPMDIQDRWLSL-----GDCQSQRLDLISIG-AWAIWNDRNNIHHQR---------LVPNVQTRSE

Query:  WILEYLEEFQNANPVRGIVNQGVDDVRRILQGVEEIIMHC--DAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKM
        W+       +  +P R I    ++      +      + C  DA +D        G + ++  G      ++      +PL AE + +L  L        
Subjt:  WILEYLEEFQNANPVRGIVNQGVDDVRRILQGVEEIIMHC--DAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFARSLKM

Query:  QCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQS-QSWLGNYPNWI
          + +  D  T I  +   +   + LA  + DI      F +I+F    R  N+ AH LA  G  Y +  S  G+ P W+
Subjt:  QCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQS-QSWLGNYPNWI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.9e-0438.3Show/hide
Query:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWI
        S+++ S  +  SY W+  I G +LL RG+ R +G+ I  K++ D WI
Subjt:  SVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTTTTGGATGTTTCGCCTTCTTCATCATCCTCTTATTTTTGGAAGGGCTTTATCTGGGGGATGGACCTTTTGAAAAGAGGTATCAGAAGAAATCTAGGTAACGA
CATCTCAATAAAAATGTTTAGTGATCCTTGGATTCCTCGTCCATCAACCTTTAAGATTCTCTCACATCCTAGATCAGAGAATGCAGATATGGTGGTGGCAGACTTTATTA
CAGAGACAAACCAGTGGGACATTGCCAAATTACATCAAGTTTTGGGAAAAGAAGATGTGGATGAGATTGTCCGACTTCCCATCAGCACATCCGCGTCGGACAAATGGGTG
TGGCATTATGATAAAATGGGGAAGTATACTGTCAAAAGTGGTTATAAACTATGTATTAAGCATAGTCAAGAGGCCTCTGCCTCTTCAGCAGAGGTAGAATCGAGATGTGG
AAGTTGCCCAGTGTGTAGGGAGGCGATGGAGACTACTGATCCTGCTCTGTTCTTATGTTCTCGTGCTCGTGAGGTGTGGGAAGGTATTCTCCCATGGATGAATGAGGAGT
TTTGGATACCCATGGATATCCAAGACAGATGGTTGAGCCTTGGTGACTGTCAAAGCCAACGGTTAGATCTTATCAGTATTGGGGCTTGGGCAATTTGGAATGATAGGAAC
AATATTCATCACCAAAGGTTAGTTCCTAATGTCCAAACTCGAAGTGAATGGATTCTTGAGTATTTGGAGGAATTCCAAAATGCAAATCCAGTTCGTGGAATTGTTAATCA
AGGAGTGGATGATGTTAGAAGAATACTACAAGGCGTTGAAGAGATAATCATGCATTGTGATGCGGCTTACGATGAGATTAATGGTAGTGTGGGTATTGGACTGGTGTTTC
AGGACAAACAAGGGAATCTTAAGGTCGTGAAGGCTTTGTCTACAATTAGTGGTATATCACCGTTGGGAGCGGAAGCGGAAGTAGTCTTACAAGGGCTTTGTTTCGCTCGA
TCTTTAAAAATGCAGTGTTTGTCAGTTCTGTCTGATTCTTTAACATTCATAAAGACAGTCAGGAAAAAAGTGCAATGTGAAACTTGTTTGGCCACTACGATATGGGATAT
TAAGGAGATTCATCAGTCTTTCAGGACCATCAGATTCGAACATGCTCTTCGCCATTATAATCGATTTGCTCATAAGTTAGCCCATGTGGGCCTTCATTATCAATCACAGT
CGTGGTTAGGAAACTATCCTAATTGGATACATAGTATGTCGAAAGAGCGATACATGTTTGTACCCCTAGGGGAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTTTTGGATGTTTCGCCTTCTTCATCATCCTCTTATTTTTGGAAGGGCTTTATCTGGGGGATGGACCTTTTGAAAAGAGGTATCAGAAGAAATCTAGGTAACGA
CATCTCAATAAAAATGTTTAGTGATCCTTGGATTCCTCGTCCATCAACCTTTAAGATTCTCTCACATCCTAGATCAGAGAATGCAGATATGGTGGTGGCAGACTTTATTA
CAGAGACAAACCAGTGGGACATTGCCAAATTACATCAAGTTTTGGGAAAAGAAGATGTGGATGAGATTGTCCGACTTCCCATCAGCACATCCGCGTCGGACAAATGGGTG
TGGCATTATGATAAAATGGGGAAGTATACTGTCAAAAGTGGTTATAAACTATGTATTAAGCATAGTCAAGAGGCCTCTGCCTCTTCAGCAGAGGTAGAATCGAGATGTGG
AAGTTGCCCAGTGTGTAGGGAGGCGATGGAGACTACTGATCCTGCTCTGTTCTTATGTTCTCGTGCTCGTGAGGTGTGGGAAGGTATTCTCCCATGGATGAATGAGGAGT
TTTGGATACCCATGGATATCCAAGACAGATGGTTGAGCCTTGGTGACTGTCAAAGCCAACGGTTAGATCTTATCAGTATTGGGGCTTGGGCAATTTGGAATGATAGGAAC
AATATTCATCACCAAAGGTTAGTTCCTAATGTCCAAACTCGAAGTGAATGGATTCTTGAGTATTTGGAGGAATTCCAAAATGCAAATCCAGTTCGTGGAATTGTTAATCA
AGGAGTGGATGATGTTAGAAGAATACTACAAGGCGTTGAAGAGATAATCATGCATTGTGATGCGGCTTACGATGAGATTAATGGTAGTGTGGGTATTGGACTGGTGTTTC
AGGACAAACAAGGGAATCTTAAGGTCGTGAAGGCTTTGTCTACAATTAGTGGTATATCACCGTTGGGAGCGGAAGCGGAAGTAGTCTTACAAGGGCTTTGTTTCGCTCGA
TCTTTAAAAATGCAGTGTTTGTCAGTTCTGTCTGATTCTTTAACATTCATAAAGACAGTCAGGAAAAAAGTGCAATGTGAAACTTGTTTGGCCACTACGATATGGGATAT
TAAGGAGATTCATCAGTCTTTCAGGACCATCAGATTCGAACATGCTCTTCGCCATTATAATCGATTTGCTCATAAGTTAGCCCATGTGGGCCTTCATTATCAATCACAGT
CGTGGTTAGGAAACTATCCTAATTGGATACATAGTATGTCGAAAGAGCGATACATGTTTGTACCCCTAGGGGAATTTTGA
Protein sequenceShow/hide protein sequence
MSVLDVSPSSSSSYFWKGFIWGMDLLKRGIRRNLGNDISIKMFSDPWIPRPSTFKILSHPRSENADMVVADFITETNQWDIAKLHQVLGKEDVDEIVRLPISTSASDKWV
WHYDKMGKYTVKSGYKLCIKHSQEASASSAEVESRCGSCPVCREAMETTDPALFLCSRAREVWEGILPWMNEEFWIPMDIQDRWLSLGDCQSQRLDLISIGAWAIWNDRN
NIHHQRLVPNVQTRSEWILEYLEEFQNANPVRGIVNQGVDDVRRILQGVEEIIMHCDAAYDEINGSVGIGLVFQDKQGNLKVVKALSTISGISPLGAEAEVVLQGLCFAR
SLKMQCLSVLSDSLTFIKTVRKKVQCETCLATTIWDIKEIHQSFRTIRFEHALRHYNRFAHKLAHVGLHYQSQSWLGNYPNWIHSMSKERYMFVPLGEF