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Lag0006261 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006261
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S acidic ribosomal protein P3
Genome locationchr6:40179615..40180662
RNA-Seq ExpressionLag0006261
SyntenyLag0006261
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR044252 - 60S acidic ribosomal protein P3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148320.1 60S acidic ribosomal protein P3-2 [Cucumis sativus]3.3e-4892.56Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITPSSAVFQVIVGGGSGGGF  GG AAAAPA GAAPAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_008451467.1 PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis melo]8.1e-4791.74Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITP+SAVFQVIVGGG GGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_022153281.1 60S acidic ribosomal protein P3-2 [Momordica charantia]2.9e-4490.16Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI-GGGAAAAAPAAGAAPAAAEAP
        MGVFTFVCRSSG EWTAKQYSGDLEGSAASTYELQRKLVQTAL+VDSSGGVQSSFSYI+P+SAVFQVI+GGG GGGFI GGGAAAAAP+ GAAP AAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI-GGGAAAAAPAAGAAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEE KEESDD DLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

XP_022929782.1 60S acidic ribosomal protein P3-2-like [Cucurbita moschata]5.8e-4585.12Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTF+CRSSGG+WTA QYSGDLEGSA STY+LQR LVQ  LSVD SGGVQSSFSY+TP+SAVFQVI+GG SGGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

XP_038889531.1 60S acidic ribosomal protein P3-2 [Benincasa hispida]1.1e-4690.98Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI-GGGAAAAAPAAGAAPAAAEAP
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITP+SAVFQVIVGGG GGGFI GGG AAAAPA G APAAAEAP
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI-GGGAAAAAPAAGAAPAAAEAP

Query:  AEKKEEVKEESDDEDLGLSLFD
        AEKKEEVKEESDDEDLGLSLFD
Subjt:  AEKKEEVKEESDDEDLGLSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0LJB2 Uncharacterized protein1.6e-4892.56Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITPSSAVFQVIVGGGSGGGF  GG AAAAPA GAAPAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A1S3BRK9 60S acidic ribosomal protein P3-23.9e-4791.74Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITP+SAVFQVIVGGG GGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A5D3BNN6 60S acidic ribosomal protein P3-23.9e-4791.74Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVCRSSGG+WTA QYSGDLEGSA STYELQRKLVQ+ALSVDSSGGVQSSFS+ITP+SAVFQVIVGGG GGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDDEDLGLSLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A6J1ENN1 60S acidic ribosomal protein P3-2-like2.8e-4585.12Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTF+CRSSGG+WTA QYSGDLEGSA STY+LQR LVQ  LSVD SGGVQSSFSY+TP+SAVFQVI+GG SGGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

A0A6J1KB28 60S acidic ribosomal protein P3-2-like2.8e-4585.12Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTF+CRSSGG+WTA QYSGDLEGSA STY+LQR LVQ  LSVD SGGVQSSFSY+TP+SAVFQVI+GG SGGGFIGGG AAAAPA G APAAAEAPA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEEVKEESDD+DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

SwissProt top hitse value%identityAlignment
O24413 60S acidic ribosomal protein P32.7e-2961.79Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI--GGGAAAAAPAAGAAPAAAEA
        MGV+TFVCR++GGEWTAKQ+SG++E SAA+ YELQR+LV  A + DS  GVQSSFS +TPSSAVFQVIVG   GG  +  GGG   AA + G   AAAEA
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFI--GGGAAAAAPAAGAAPAAAEA

Query:  PAEKKEEVKEESDDEDLGLSLFD
        P E+K+E ++E  D+D+G SLFD
Subjt:  PAEKKEEVKEESDDEDLGLSLFD

P52855 60S acidic ribosomal protein P18.8e-0456.72Show/hide
Query:  FSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPAEKKEEVKEESDDEDLGLSLFD
        F+ +     V  +I+  GSGGG      AAAAPA GAA AAA A  EKKEE KEESDD D+G SLFD
Subjt:  FSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPAEKKEEVKEESDDEDLGLSLFD

P56724 60S acidic ribosomal protein P31.1e-3067.77Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGV+TFVCRSSG EWTAKQ  G+LE SAA+ YELQR+LV  A + DS+ GVQSSFS ++PSSAVFQVI+G   GG  IGGGAAA A + GAA  A +A  
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLFD
        EKKEE KEES+D DLG SLFD
Subjt:  EKKEEVKEESDDEDLGLSLFD

Q9LVC9 60S acidic ribosomal protein P3-22.6e-3265.83Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVF+FVC+S GGEWTAKQ+ GDLE SA+STY+LQRKLVQTALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF  GG AAA    G   AAA    
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

Q9SVZ6 60S acidic ribosomal protein P3-12.2e-3165Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVC++ GG W+AKQ+ G+LE SA+STYELQRKLVQ +LS DSSGGVQSSFS ++P+SAVFQVIVGGG GGGF  GGAA++   AG A AA +   
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        +KKEE +EE  + D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

Arabidopsis top hitse value%identityAlignment
AT4G25890.1 60S acidic ribosomal protein family1.6e-3265Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVFTFVC++ GG W+AKQ+ G+LE SA+STYELQRKLVQ +LS DSSGGVQSSFS ++P+SAVFQVIVGGG GGGF  GGAA++   AG A AA +   
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        +KKEE +EE  + D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

AT5G57290.1 60S acidic ribosomal protein family1.9e-3365.83Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVF+FVC+S GGEWTAKQ+ GDLE SA+STY+LQRKLVQTALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF  GG AAA    G   AAA    
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF

AT5G57290.2 60S acidic ribosomal protein family1.6e-2976.54Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGG
        MGVF+FVC+S GGEWTAKQ+ GDLE SA+STY+LQRKLVQTALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF  GG
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGG

AT5G57290.3 60S acidic ribosomal protein family2.7e-3265.83Show/hide
Query:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA
        MGVF+FVC+S GGEWTAKQ+ GDLE SA+STY+LQRKLVQTALS DSSGGVQSSFS ++P+SAVF V++GGG GGGF  GG AAA    G   AAA    
Subjt:  MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPA

Query:  EKKEEVKEESDDEDLGLSLF
        EKK+E  EE ++ D G  LF
Subjt:  EKKEEVKEESDDEDLGLSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCGAGTGGACCGCCAAGCAGTATTCCGGCGATCTTGAAGGCTCCGCCGCTTCCACCTATGAGCTCCAGAGGAA
ACTCGTTCAGACTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCCTTCTCTTACATCACTCCCAGCTCCGCCGTTTTCCAGGTTATCGTTGGTGGTGGCTCTG
GTGGCGGGTTCATTGGCGGTGGAGCAGCTGCAGCCGCCCCTGCTGCGGGAGCTGCACCAGCTGCTGCCGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGT
GATGACGAAGACCTTGGCCTTTCACTTTTTGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCGAGTGGACCGCCAAGCAGTATTCCGGCGATCTTGAAGGCTCCGCCGCTTCCACCTATGAGCTCCAGAGGAA
ACTCGTTCAGACTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCCTTCTCTTACATCACTCCCAGCTCCGCCGTTTTCCAGGTTATCGTTGGTGGTGGCTCTG
GTGGCGGGTTCATTGGCGGTGGAGCAGCTGCAGCCGCCCCTGCTGCGGGAGCTGCACCAGCTGCTGCCGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGT
GATGACGAAGACCTTGGCCTTTCACTTTTTGATTAG
Protein sequenceShow/hide protein sequence
MGVFTFVCRSSGGEWTAKQYSGDLEGSAASTYELQRKLVQTALSVDSSGGVQSSFSYITPSSAVFQVIVGGGSGGGFIGGGAAAAAPAAGAAPAAAEAPAEKKEEVKEES
DDEDLGLSLFD