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Lag0006269 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006269
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr6:40322243..40323076
RNA-Seq ExpressionLag0006269
SyntenyLag0006269
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0009536 - plastid (cellular component)
GO:0034357 - photosynthetic membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RXH79902.1 hypothetical protein DVH24_041049 [Malus domestica]6.2e-0540.16Show/hide
Query:  VGSTDEDLSRNGAVGAGVAAAAAEHATRAGAGPTANVTVRPAGAEARDSTGAVAGEAAGEGTGHGLLVHDRFDENGAGEDAEGVASWRGASENGGFLFQ-
        VG+   DL+R          AA +  TRAG  P  ++T+ PA AEA D T +VA   A EG GHGLLVHDRFDE+ A +DA          E GG L Q 
Subjt:  VGSTDEDLSRNGAVGAGVAAAAAEHATRAGAGPTANVTVRPAGAEARDSTGAVAGEAAGEGTGHGLLVHDRFDENGAGEDAEGVASWRGASENGGFLFQ-

Query:  -----LKIKKNKKEAAEASRKERRRRK
             L    +  E  E+  +E ++RK
Subjt:  -----LKIKKNKKEAAEASRKERRRRK
TYK15728.1 chlorophyll a-b binding protein 7 [Cucumis melo var. makuwa]3.5e-1667.06Show/hide
Query:  DLSRNGAVGAGVAAAAAEHATRAGAGPTANVTVRPAGAEARDSTGAVAGEAAGEGTGHGLLVHDRFDENGAGEDAEGVASWRGAS
        DLS   A GAG A AAAEH TRAGAG  A+V+V PAGAE  D+  AVAG AAGEG GHGL+VHD FDE+GAGEDAE  A  R  S
Subjt:  DLSRNGAVGAGVAAAAAEHATRAGAGPTANVTVRPAGAEARDSTGAVAGEAAGEGTGHGLLVHDRFDENGAGEDAEGVASWRGAS
TrEMBL top hitse value%identityAlignment
A0A498ICN2 Chlorophyll a-b binding protein, chloroplastic3.0e-0540.16Show/hide
Query:  VGSTDEDLSRNGAVGAGVAAAAAEHATRAGAGPTANVTVRPAGAEARDSTGAVAGEAAGEGTGHGLLVHDRFDENGAGEDAEGVASWRGASENGGFLFQ-
        VG+   DL+R          AA +  TRAG  P  ++T+ PA AEA D T +VA   A EG GHGLLVHDRFDE+ A +DA          E GG L Q 
Subjt:  VGSTDEDLSRNGAVGAGVAAAAAEHATRAGAGPTANVTVRPAGAEARDSTGAVAGEAAGEGTGHGLLVHDRFDENGAGEDAEGVASWRGASENGGFLFQ-

Query:  -----LKIKKNKKEAAEASRKERRRRK
             L    +  E  E+  +E ++RK
Subjt:  -----LKIKKNKKEAAEASRKERRRRK
A0A5D3CWU8 Chlorophyll a-b binding protein, chloroplastic1.7e-1667.06Show/hide
Query:  DLSRNGAVGAGVAAAAAEHATRAGAGPTANVTVRPAGAEARDSTGAVAGEAAGEGTGHGLLVHDRFDENGAGEDAEGVASWRGAS
        DLS   A GAG A AAAEH TRAGAG  A+V+V PAGAE  D+  AVAG AAGEG GHGL+VHD FDE+GAGEDAE  A  R  S
Subjt:  DLSRNGAVGAGVAAAAAEHATRAGAGPTANVTVRPAGAEARDSTGAVAGEAAGEGTGHGLLVHDRFDENGAGEDAEGVASWRGAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATGATAGTTGGTTCGACGGACGAAGATTTGTCTCGGAATGGGGCAGTTGGCGCTGGAGTTGCCGCAGCTGCTGCAGAACATGCGACCAGAGCCGGAGCAGGTCC
GACAGCCAATGTCACCGTCAGACCAGCGGGAGCAGAGGCAAGGGACTCGACCGGTGCTGTTGCAGGAGAGGCAGCGGGGGAAGGAACCGGCCATGGGCTTTTAGTCCATG
ACCGATTTGATGAGAACGGCGCCGGCGAGGACGCTGAGGGGGTGGCGAGCTGGAGGGGGGCGTCGGAAAACGGAGGCTTCCTCTTTCAGTTAAAAATAAAAAAAAATAAA
AAAGAAGCAGCTGAAGCTTCGAGGAAGGAAAGAAGAAGAAGAAAAGAAGGAAAAAAATATGGCGGCTGCCGCCGCTATTCGCCGGCAGTCGGCGGCGGCCGGCCACCGGA
GTTAAAGAAGAAGAAGATGGGGAAGAAGGAAGATGGAGATGGGGAAGAGAAAGGAGAAGGAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGATGATAGTTGGTTCGACGGACGAAGATTTGTCTCGGAATGGGGCAGTTGGCGCTGGAGTTGCCGCAGCTGCTGCAGAACATGCGACCAGAGCCGGAGCAGGTCC
GACAGCCAATGTCACCGTCAGACCAGCGGGAGCAGAGGCAAGGGACTCGACCGGTGCTGTTGCAGGAGAGGCAGCGGGGGAAGGAACCGGCCATGGGCTTTTAGTCCATG
ACCGATTTGATGAGAACGGCGCCGGCGAGGACGCTGAGGGGGTGGCGAGCTGGAGGGGGGCGTCGGAAAACGGAGGCTTCCTCTTTCAGTTAAAAATAAAAAAAAATAAA
AAAGAAGCAGCTGAAGCTTCGAGGAAGGAAAGAAGAAGAAGAAAAGAAGGAAAAAAATATGGCGGCTGCCGCCGCTATTCGCCGGCAGTCGGCGGCGGCCGGCCACCGGA
GTTAAAGAAGAAGAAGATGGGGAAGAAGGAAGATGGAGATGGGGAAGAGAAAGGAGAAGGAGAATAG
Protein sequenceShow/hide protein sequence
MGMIVGSTDEDLSRNGAVGAGVAAAAAEHATRAGAGPTANVTVRPAGAEARDSTGAVAGEAAGEGTGHGLLVHDRFDENGAGEDAEGVASWRGASENGGFLFQLKIKKNK
KEAAEASRKERRRRKEGKKYGGCRRYSPAVGGGRPPELKKKKMGKKEDGDGEEKGEGE