| GenBank top hits | e value | %identity | Alignment |
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| KAA3469008.1 reverse transcriptase [Gossypium australe] | 2.6e-44 | 38.33 | Show/hide |
Query: IKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRY--------------HVDSVVKSKDG--HWRFTGFYGDPEVRNRKCSW
+KI+ WNVRG+G R L+ +R PQ++FL ETK+ S + ++ + + H+D VV+ +DG WRFTGFYG+P NR+ SW
Subjt: IKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRY--------------HVDSVVKSKDG--HWRFTGFYGDPEVRNRKCSW
Query: ELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCNDSFWMMFLFSTVSHLK
EL+R L + ++PW++ GDFNE+L S +KQGG R++ Q FR +DDC L D+ F G +TW + + ++ERLDRG+ N +W +F V HL+
Subjt: ELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCNDSFWMMFLFSTVSHLK
Query: FRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
SDHCP+ ++ + G + G + FRF W C
Subjt: FRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
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| KAF5443558.1 hypothetical protein F2P56_036105, partial [Juglans regia] | 7.0e-45 | 39.38 | Show/hide |
Query: IKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLR---------------------------------YHVDSVVKSKDG-HW
+K++CWN RG+GNP+ LR L+ EDP L+FL ETK+K+ K +L +H+D++++ DG W
Subjt: IKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLR---------------------------------YHVDSVVKSKDG-HW
Query: RFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGL
RFTG YG+PEV NR +W L+RRLN PW++GGDFNELL +K+GG R + Q + FR+VI DC L D+ FRG +TW + G + ERLDR L
Subjt: RFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGL
Query: CNDSFWMMFLFSTVSHLKFRLSDHCPVRIDVDSCGGLASRGCRP-LFRFEEVWTQYDEC
N+ F +F V H SDH PV D + L R P LFRFE +W ++C
Subjt: CNDSFWMMFLFSTVSHLKFRLSDHCPVRIDVDSCGGLASRGCRP-LFRFEEVWTQYDEC
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| KAF5477448.1 hypothetical protein F2P56_004088 [Juglans regia] | 1.9e-42 | 42.28 | Show/hide |
Query: PSGIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKI-----KSSKASV---------LKEKLRYHVDSVVKSKD-GHWRFTGFYGDPEVRNRKC
P+ IK +CWN RG+GNP +LR L+ E P LLFL ETK+ S S+ LK RYH+D VK D WRFTG YG+PE NR
Subjt: PSGIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKI-----KSSKASV---------LKEKLRYHVDSVVKSKD-GHWRFTGFYGDPEVRNRKC
Query: SWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCNDSFWMMFLFSTVSH
+W L+R L+ + +PW+LGGDFNE+L +K GG R Q FR+++ C L D+ FRG FTW+ + G + ERLDR L N SF+ +F + V +
Subjt: SWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCNDSFWMMFLFSTVSH
Query: LKFRLSDHCPVRIDVDSCGGLASRGCRPLFR----FEEVWTQYDEC
SDH PV D L SR RPL R FE +W + C
Subjt: LKFRLSDHCPVRIDVDSCGGLASRGCRPLFR----FEEVWTQYDEC
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| RZB91206.1 Retrovirus-related Pol polyprotein from transposon RE1 [Glycine soja] | 4.1e-45 | 41.26 | Show/hide |
Query: EGPMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGVTNQVNEEVVWHNI---ILRSPS
E PMEI VD+K A+ALAKNPVFH RSKHIDTR+H+IR+C KEV+LKY+ SQDQ ADIFTK LKLETF+++RS+LGVTNQV V W +
Subjt: EGPMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGVTNQVNEEVVWHNI---ILRSPS
Query: GIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRYHVDSVVKSKDGHWRFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWV
G I+ A + LR LVR + ++FLS +++S + KL + + D R G+YG + R K SW+L+R + PW
Subjt: GIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRYHVDSVVKSKDGHWRFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWV
Query: LGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCN
+ GDFN++L E K G Q FR+ + + G+ D+ G+P+TW + ++E+LD + N
Subjt: LGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCN
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| XP_038697213.1 uncharacterized protein LOC119994946 [Tripterygium wilfordii] | 2.6e-44 | 36.82 | Show/hide |
Query: IKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRY---------------------------------HVDSVVKSKDG-HW
+KII WN RG+G+PR ++L ++V+ P +LFLSET++ SS + L+ KL++ H+D+V+ +D W
Subjt: IKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRY---------------------------------HVDSVVKSKDG-HW
Query: RFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGL
RFTG YG P +R W L+RRL S+PWV GGDFNE+LS+ + G N R + Q FRD + DC L D+ + G+ FTW ++G ++ERLDR +
Subjt: RFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGL
Query: CNDSFWMMFLFSTVSHLKFRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
+DS+ FL + + HL SDH P+ + + +++R CR F FEE W + EC
Subjt: CNDSFWMMFLFSTVSHLKFRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2N9EVJ2 Reverse transcriptase domain-containing protein | 9.2e-43 | 38.95 | Show/hide |
Query: KSLKLETFIRMRSLLGVTNQVNEEVVWHNII------LRSPSGIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRYHVDS
+SL ++ I L+ NQ N E ++ N + P + I WN RG+GNP L +LVRE+DP +L + ET + ++ V LRY +
Subjt: KSLKLETFIRMRSLLGVTNQVNEEVVWHNII------LRSPSGIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRYHVDS
Query: VVKSKDGHWRFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVT
+ + D WRFTGFYG PE R SW L++ L+ ++PW+ GDFN+LLS E+KQGG R Q Q+FRD ID+CG D+ ++G PFTW + T
Subjt: VVKSKDGHWRFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVT
Query: MQERLDRGLCNDSFWMMFLFSTVSHLKFRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
+ ERLDRGL + MF + + HL SDH P+ + V + R LF+FEEVW C
Subjt: MQERLDRGLCNDSFWMMFLFSTVSHLKFRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
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| A0A2N9G5I8 Reverse transcriptase domain-containing protein | 1.1e-43 | 41.63 | Show/hide |
Query: SGIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRYHV------DSVV-KSKDGHWRFTGFYGDPEVRNRKCSWELMRRLN
S + I WN RG+GNP L +LVRE+DP +LF+ ET + ++ VL+ KL + + D+V+ + K+ WRFTGFYG PE R SW L++ +
Subjt: SGIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRYHV------DSVV-KSKDGHWRFTGFYGDPEVRNRKCSWELMRRLN
Query: DLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCNDSFWMMFLFSTVSHLKFRLSDHC
S+PW+ GDFNELLS ++KQGG R Q Q+FRD +D+CG D+ ++G PFTW + T+ ERLDRGL ++ +F + V HL SDH
Subjt: DLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCNDSFWMMFLFSTVSHLKFRLSDHC
Query: PVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
P+ + V + LFRFEEVW C
Subjt: PVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
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| A0A2N9H936 Uncharacterized protein | 7.0e-43 | 36.02 | Show/hide |
Query: PSGIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLK---------------------------------EKLRYHVDSVVK-SKD
P + + WN RG+GNP+ + L +VR++DP +LFLSETK+ + VL+ +H+D+++ +
Subjt: PSGIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLK---------------------------------EKLRYHVDSVVK-SKD
Query: GHWRFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLD
WRFTGFYG P V + +W+L+R L ++PW+ GGDFNE+L +E+K G AR Q FR V+DDCG D+ F G P+TW+ + G + ERLD
Subjt: GHWRFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLD
Query: RGLCNDSFWMMFLFSTVSHLKFRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
R L + + F S V+HL SDH P+ +++ C G +R R FRFEE+WT + C
Subjt: RGLCNDSFWMMFLFSTVSHLKFRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
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| A0A445IYM0 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-45 | 41.26 | Show/hide |
Query: EGPMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGVTNQVNEEVVWHNI---ILRSPS
E PMEI VD+K A+ALAKNPVFH RSKHIDTR+H+IR+C KEV+LKY+ SQDQ ADIFTK LKLETF+++RS+LGVTNQV V W +
Subjt: EGPMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGVTNQVNEEVVWHNI---ILRSPS
Query: GIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRYHVDSVVKSKDGHWRFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWV
G I+ A + LR LVR + ++FLS +++S + KL + + D R G+YG + R K SW+L+R + PW
Subjt: GIKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRYHVDSVVKSKDGHWRFTGFYGDPEVRNRKCSWELMRRLNDLPSMPWV
Query: LGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCN
+ GDFN++L E K G Q FR+ + + G+ D+ G+P+TW + ++E+LD + N
Subjt: LGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCN
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| A0A5B6VIZ4 Reverse transcriptase | 1.3e-44 | 38.33 | Show/hide |
Query: IKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRY--------------HVDSVVKSKDG--HWRFTGFYGDPEVRNRKCSW
+KI+ WNVRG+G R L+ +R PQ++FL ETK+ S + ++ + + H+D VV+ +DG WRFTGFYG+P NR+ SW
Subjt: IKIICWNVRGVGNPRAFNSLRQLVREEDPQLLFLSETKIKSSKASVLKEKLRY--------------HVDSVVKSKDG--HWRFTGFYGDPEVRNRKCSW
Query: ELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCNDSFWMMFLFSTVSHLK
EL+R L + ++PW++ GDFNE+L S +KQGG R++ Q FR +DDC L D+ F G +TW + + ++ERLDRG+ N +W +F V HL+
Subjt: ELMRRLNDLPSMPWVLGGDFNELLSSEKKQGGNARDQGQKQEFRDVIDDCGLTDMMFRGHPFTWFKLKNGRVTMQERLDRGLCNDSFWMMFLFSTVSHLK
Query: FRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
SDHCP+ ++ + G + G + FRF W C
Subjt: FRLSDHCPVRIDVDSCGGLASRGCRPLFRFEEVWTQYDEC
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.3e-13 | 41.77 | Show/hide |
Query: MEGPMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGV
+E P++I+ DN+ I++A NP H R+KHID ++H+ R+ N + L+YI +++Q ADIFTK L F+ +R LG+
Subjt: MEGPMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.2e-08 | 34.25 | Show/hide |
Query: IFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGV
++ D++SAI L+KN ++H R+KHID R+H+IR+ ++ +++ I + + AD+ TK + F + L+G+
Subjt: IFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 4.1e-08 | 38.96 | Show/hide |
Query: PMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGVT
P I+ DN A L NPVFH R KHI +H+IR+ + + + ++ + DQ AD TK L F S +GVT
Subjt: PMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGVT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.8e-07 | 36.84 | Show/hide |
Query: PMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGV
P I+ DN A L NPVFH R KHI +H+IR+ + + + ++ + DQ AD TK L F +GV
Subjt: PMEIFVDNKSAIALAKNPVFHGRSKHIDTRFHYIRDCFANKEVELKYIKSQDQAADIFTKSLKLETFIRMRSLLGV
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