CuGenDBv2

Gene ID	Lag0006276
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	transcription factor bHLH146-like
Genome location	chr6:40393386..40396849
RNA-Seq Expression	Lag0006276
Synteny	Lag0006276
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domains	IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586090.1 Transcription factor basic helix-loop-helix 146, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-51

69.23

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN
        MGRQIL KR+RVLSL+PNKLAY+MFARNYV+YL+TSL KI    SHHHQQ   + FQ+LVKFEVDMAMA+S A+EF+WGNALKKKLLQRE   +GNG+N 
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN

Query:  GGNFDFSLQTVKFSQENLEREEEDDQE----EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
           F  SLQ VKF++ENLERE+E+ +E    EE+K+ENGLMKLRKI+PGGS        NG+LEEDDL KQTESYIKCLELQ
Subjt:  GGNFDFSLQTVKFSQENLEREEEDDQE----EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

XP_022938205.1 transcription factor bHLH146-like [Cucurbita moschata]

6.0e-52

69.78

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN
        MGRQIL KR+RVLSL+PNKLAY+MFARNYV+YL+TSL KI    SHHHQQ   + FQ+LVKFEVDMAMA+S A+EF+WGNALKKKLLQRE   +GNG+N 
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN

Query:  GGNFDFSLQTVKFSQENLEREEEDDQE----EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
           F  SLQ VKFS+ENLERE+E+ +E    EE+K+ENGLMKLRKI+PGGS        NG+LEEDDL KQTESYIKCLELQ
Subjt:  GGNFDFSLQTVKFSQENLEREEEDDQE----EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

XP_022969610.1 transcription factor bHLH146-like [Cucurbita maxima]

4.7e-49

67.93

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHH--HQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNG
        MGRQIL KR+RVLSL+P+KLAY+MFARNYV+YL+TSL KIS    HH  HQQ+ FQ+LVKFEVDMAMA+S A+EF+WGNALKKKLLQRE   + NG+N  
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHH--HQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNG

Query:  GNFDFSLQTVKFSQENLEREEEDDQE-------EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
          F FSL  VKFS+ENLERE+E+ +E       EE+K+ENGLMKLRKI+PGGS        NG+LEEDDL KQTESYIKCLELQ
Subjt:  GNFDFSLQTVKFSQENLEREEEDDQE-------EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

XP_023538247.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]

4.1e-53

72.07

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN
        MGRQIL KR+RVLSL+PNKLAY+MFARNYV+YL+TSL KI    SHHHQQ   + FQ+LVKFEVDMAMA+S A+EF+WGNALKKKLLQRE   +GNG+N 
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN

Query:  GGNFDFSLQTVKFSQENLERE-EEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
           F FSLQTVKFSQENLERE EE ++ +E K+ENGLMKLRKI+PGGS        NG+LEEDDL KQTESYIKCLELQ
Subjt:  GGNFDFSLQTVKFSQENLERE-EEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

XP_038877916.1 transcription factor bHLH146-like [Benincasa hispida]

3.0e-51

66.29

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Query:  MGRQILSK-RRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKK--FQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN
        MGRQI+ K  RRV SL+PNK+AY+MFARNYV++L+TSL KIS +   HHQQ++  FQ+ VKFEVDMAMA+SA+ +FAWG ALKKKLLQR+ VGN N    
Subjt:  MGRQILSK-RRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKK--FQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN

Query:  GGNFDFSLQTVKFSQENLEREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
          +FDFSLQTVKFSQENL +EEE++ EEEKKME+GLMKLRKI+PGG+        + ++E+DDLLKQTESY+KCLELQ
Subjt:  GGNFDFSLQTVKFSQENLEREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJA7 Uncharacterized protein

1.3e-44

63.74

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGGN
        M R+++ K RRV S++P+K+AY+MF RNYV++L+TSL KI    SH  QQ+ F++LVKFEVDMAMA+S ASEF+WG ALKKKLLQR+    GNGN NG  
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGGN

Query:  FDFSLQTV-KFSQENLEREEED-----DQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDL-EEDDLLKQTESYIKCLELQ
        FDFS+QTV K SQENL  EEED     ++EEE++MENGLMKLRKI+PGG    D+ +  G+L EEDDLLKQTESY+KCLELQ
Subjt:  FDFSLQTV-KFSQENLEREEED-----DQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDL-EEDDLLKQTESYIKCLELQ

A0A1S4DZN3 uncharacterized protein At4g30180

6.5e-44

61.7

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQR----ELVGNGNGNN
        M R+I+ K RRV S++PNK+AY+MFARNYV++L+TSL KI    SH  QQ+ FQ+LV+FEVDMAMA+S ASEF+WG ALKKKLLQR    E++GNG+ N 
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQR----ELVGNGNGNN

Query:  NGGNFDFSLQTV-KFSQENL--------EREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
            FDFSLQT+ K S +NL        E EEE+++EEE++MENGLMKLRKI+PG  GDD     N   EEDDLLKQTESY+KCLELQ
Subjt:  NGGNFDFSLQTV-KFSQENL--------EREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

A0A6J1DIU0 transcription factor bHLH146

3.7e-47

67.05

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGGN
        MGRQI+ KRRRV SL+PNKL Y MFARNY + L+ SL+KIS  P+H + QK    +VKFEVDMAMA S ASEFAWG+ALK+KLLQ++  GNGNG N   +
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGGN

Query:  FDFSLQTVKFSQENLEREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGD-LEEDDLLKQTESYIKCLELQ
        FDFSLQT+KFS+E    +EE+++E++KKMENGL+KLRKILPGG  ++D   +NGD LEEDDLLKQTESYIKCLELQ
Subjt:  FDFSLQTVKFSQENLEREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGD-LEEDDLLKQTESYIKCLELQ

A0A6J1FJ33 transcription factor bHLH146-like

2.9e-52

69.78

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN
        MGRQIL KR+RVLSL+PNKLAY+MFARNYV+YL+TSL KI    SHHHQQ   + FQ+LVKFEVDMAMA+S A+EF+WGNALKKKLLQRE   +GNG+N 
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQ---KKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNN

Query:  GGNFDFSLQTVKFSQENLEREEEDDQE----EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
           F  SLQ VKFS+ENLERE+E+ +E    EE+K+ENGLMKLRKI+PGGS        NG+LEEDDL KQTESYIKCLELQ
Subjt:  GGNFDFSLQTVKFSQENLEREEEDDQE----EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

A0A6J1I0E6 transcription factor bHLH146-like

2.3e-49

67.93

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHH--HQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNG
        MGRQIL KR+RVLSL+P+KLAY+MFARNYV+YL+TSL KIS    HH  HQQ+ FQ+LVKFEVDMAMA+S A+EF+WGNALKKKLLQRE   + NG+N  
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHH--HQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNG

Query:  GNFDFSLQTVKFSQENLEREEEDDQE-------EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
          F FSL  VKFS+ENLERE+E+ +E       EE+K+ENGLMKLRKI+PGGS        NG+LEEDDL KQTESYIKCLELQ
Subjt:  GNFDFSLQTVKFSQENLEREEEDDQE-------EEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

SwissProt top hits

e value

%identity

Alignment

Q9SUM5 Transcription factor bHLH146

6.1e-15

34.29

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGGN
        M RQI+++++RV SL+PNK   ++F R Y  +L+ +L K++ N      +   +Q VK EVDMA+A S A EFAW   L +KL         + +N    
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGGN

Query:  FDFSLQTVKFSQENLEREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
           S   ++     LER +++   EE  +E  L +L+K+LPGG           ++  +++L +  +YIKCLELQ
Subjt:  FDFSLQTVKFSQENLEREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

Arabidopsis top hits

e value

%identity

Alignment

AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors

1.4e-19

37.1

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKK-FQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGG
        M RQI++KR+RV SL PNK   ++FAR YV +L+ +L KI+ N S     K+  +Q VK EVDMA A S A EFAW   L++KLL               
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKK-FQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGG

Query:  NFDFSLQTVKFSQENLER----------EEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
         +D  + T     E LER          ++ D++EE  +++  L +L+K+LPGG           ++  +++L +  SYI CLELQ
Subjt:  NFDFSLQTVKFSQENLER----------EEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators

4.3e-16

34.29

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Query:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGGN
        M RQI+++++RV SL+PNK   ++F R Y  +L+ +L K++ N      +   +Q VK EVDMA+A S A EFAW   L +KL         + +N    
Subjt:  MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGGN

Query:  FDFSLQTVKFSQENLEREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ
           S   ++     LER +++   EE  +E  L +L+K+LPGG           ++  +++L +  +YIKCLELQ
Subjt:  FDFSLQTVKFSQENLEREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQ

Sequences

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CDS sequence

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ATGGGAAGGCAAATTTTGAGCAAAAGAAGAAGGGTATTGTCCCTTGACCCAAACAAACTTGCATACTCCATGTTTGCAAGAAACTATGTCAGATATTTGATCACATCCTT
AGCCAAAATTTCTTCAAACCCTTCCCATCATCATCAACAAAAAAAATTTCAACAACTTGTGAAGTTTGAAGTGGACATGGCAATGGCTGAATCAGCTGCAAGTGAATTTG
CATGGGGCAATGCTCTAAAAAAGAAGCTTCTTCAAAGAGAATTAGTTGGCAATGGCAATGGCAACAACAATGGTGGCAATTTTGATTTCTCTCTCCAAACAGTGAAATTT
TCTCAAGAAAATTTAGAGAGAGAAGAAGAAGATGATCAAGAAGAAGAGAAAAAGATGGAGAATGGATTGATGAAGCTGAGAAAAATCTTACCAGGTGGTAGTGGAGATGA
TGATGATTCTAATAATAATGGAGATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTACATAAAATGTCTTGAGTTGCAGTGCCCCGGTTCTACCGGATTCGACC
CCAAGCGGCTCCTGAAACCAAGAAGAACCCTAAAAGACGATGCAGGGAGTGTTGAAGTCATGAAGGGTGTTTGGTCTTCAAGGAGTGTTGAAGTCTTGAAGAGTGTTTGG
TCTTCAAGAAGTGTTCAACACTTGACTTATGGATTGCAAAGAGTCTCCGGTCTTCAAATTTGGTGGAATCTCTCTGAATTCTCTGGTTCTGCTTGA

mRNA sequence

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Protein sequence

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MGRQILSKRRRVLSLDPNKLAYSMFARNYVRYLITSLAKISSNPSHHHQQKKFQQLVKFEVDMAMAESAASEFAWGNALKKKLLQRELVGNGNGNNNGGNFDFSLQTVKF
SQENLEREEEDDQEEEKKMENGLMKLRKILPGGSGDDDDSNNNGDLEEDDLLKQTESYIKCLELQCPGSTGFDPKRLLKPRRTLKDDAGSVEVMKGVWSSRSVEVLKSVW
SSRSVQHLTYGLQRVSGLQIWWNLSEFSGSA

Lag0006276 (gene) of Sponge gourd (AG-4) v1 genome