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Lag0006286 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006286
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:40597654..40599857
RNA-Seq ExpressionLag0006286
SyntenyLag0006286
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU39028.1 hypothetical protein TSUD_59840 [Trifolium subterraneum]1.6e-1026.13Show/hide
Query:  KEQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRG-----DINAEDMDF-------------RKSATKIGSLLGKVEQVDIDEETEPK
        K Q  I  +G N++L++F   R   ++ + GPW +D+++L  + + G     +I+   M F                A K+G L+GK E  +ID +   +
Subjt:  KEQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRG-----DINAEDMDF-------------RKSATKIGSLLGKVEQVDIDEETEPK

Query:  MGCSLIIKIQIDVKKPLKR-------------------------------HTIKECDTC--------NDSKEEELLYGPWMHEPVKLKGDLKTKKAASS
        MGC L IK+ ID+KKP+KR                               H I+EC+           + +E+EL +GPW+      + +   KK + S
Subjt:  MGCSLIIKIQIDVKKPLKR-------------------------------HTIKECDTC--------NDSKEEELLYGPWMHEPVKLKGDLKTKKAASS

KAG2663507.1 hypothetical protein I3760_16G033000 [Carya illinoinensis]1.7e-0726Show/hide
Query:  EQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDF------------------RKSATKIGSLLGKVEQVDIDEETEPKM
        +  ++  V  N F+  F     K  ++   PWF+D  L       G I   +M F                  ++   K+GS +G+VE+V++DE+ +   
Subjt:  EQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDF------------------RKSATKIGSLLGKVEQVDIDEETEPKM

Query:  GCSLIIKIQIDVKKPLKR------HTIKE------------CDTCND----------SKEEELLYGPWM--HEPVK----LKGDLKTKKAASSEEILETN
        G SL +KI +D++KPL R      H +K             C TC             K+  + +G W+    P+K    +K +L T K +SSE  +E N
Subjt:  GCSLIIKIQIDVKKPLKR------HTIKE------------CDTCND----------SKEEELLYGPWM--HEPVK----LKGDLKTKKAASSEEILETN

MCH96370.1 hypothetical protein [Trifolium medium]1.2e-0824.88Show/hide
Query:  IDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRK------------------SATKIGSLLGKVEQVDIDEETEPKMGCSL
        I  +  N+FL+KF   +    +   GPW +D++LL    + GD    +++  +                   A K+G++LG  E++D  E    +MG  L
Subjt:  IDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRK------------------SATKIGSLLGKVEQVDIDEETEPKMGCSL

Query:  IIKIQIDVKKPLKR---HTIKEC--------DTCNDSKEEELLYGPWMHEPVKLKGDLKTKKAAS----SEEILETNGKKNNYSMMELDLNYDGEKKENK
         I++ +D++KPLKR   H +++C        D  ++ +E++L +GPW+      K     KK +S    S+ +  +N      S     ++ + E +++K
Subjt:  IIKIQIDVKKPLKR---HTIKEC--------DTCNDSKEEELLYGPWMHEPVKLKGDLKTKKAAS----SEEILETNGKKNNYSMMELDLNYDGEKKENK

Query:  NVNTRETARPIAE
        + N  E  +  AE
Subjt:  NVNTRETARPIAE

TXG53848.1 hypothetical protein EZV62_019104 [Acer yangbiense]5.8e-0830.43Show/hide
Query:  IDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRK------------------SATKIGSLLGKVEQVDIDEETEPKMGCSL
        I+ VG NIF++ F N   +  I + GPW++DKSL+  E+  G  N   + F K                  +A  +   +G+V  +DI  E++   G  +
Subjt:  IDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRK------------------SATKIGSLLGKVEQVDIDEETEPKMGCSL

Query:  IIKIQIDVKKPLKRHTIKECDTCND-SKEEELLYGPWM
         +K+QID+ KPLKR    + D  N+    +   +G WM
Subjt:  IIKIQIDVKKPLKRHTIKECDTCND-SKEEELLYGPWM

XP_042979872.1 uncharacterized protein LOC122310049 [Carya illinoinensis]1.7e-0726.26Show/hide
Query:  EQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDF------------------RKSATKIGSLLGKVEQVDIDEETEPKM
        +  ++  V  N F+  F     K  ++   PWF+D  L       G I   +M F                  ++   K+GS +G+VE+V++DE+ +   
Subjt:  EQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDF------------------RKSATKIGSLLGKVEQVDIDEETEPKM

Query:  GCSLIIKIQIDVKKPLKR------HTIKE------------CDTCND----------SKEEELLYGPWMH--EPVK----LKGDLKTKKAASSEEILE
        G SL +KI +D++KPL R      H +K             C TC             K+  + +G W+H   P+K    +K +L T K +SSE  +E
Subjt:  GCSLIIKIQIDVKKPLKR------HTIKE------------CDTCND----------SKEEELLYGPWMH--EPVK----LKGDLKTKKAASSEEILE

TrEMBL top hitse value%identityAlignment
A0A2K3PIT6 Ribonuclease H (Fragment)9.0e-0723.38Show/hide
Query:  KEQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRKS------------------ATKIGSLLGKVEQVDIDEETEPK
        K    I  +  N+FL++F + R    +   GPW +D++L+  + + G+    D++   +                  A ++G+ +G+   V+ D +   +
Subjt:  KEQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRKS------------------ATKIGSLLGKVEQVDIDEETEPK

Query:  MGCSLIIKIQIDVKKPLKR-------------------------------HTIKEC--------DTCNDSKEEELLYGPWMH-EPV-KLKGDLKTKKAAS
        +G  L +K+ ID++KPLKR                               H +K+C        D   D +E+EL YG W+   P+ K+ GD+K ++++S
Subjt:  MGCSLIIKIQIDVKKPLKR-------------------------------HTIKEC--------DTCNDSKEEELLYGPWMH-EPV-KLKGDLKTKKAAS

Query:  S
        S
Subjt:  S

A0A2Z6N2E1 Uncharacterized protein7.8e-1126.13Show/hide
Query:  KEQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRG-----DINAEDMDF-------------RKSATKIGSLLGKVEQVDIDEETEPK
        K Q  I  +G N++L++F   R   ++ + GPW +D+++L  + + G     +I+   M F                A K+G L+GK E  +ID +   +
Subjt:  KEQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRG-----DINAEDMDF-------------RKSATKIGSLLGKVEQVDIDEETEPK

Query:  MGCSLIIKIQIDVKKPLKR-------------------------------HTIKECDTC--------NDSKEEELLYGPWMHEPVKLKGDLKTKKAASS
        MGC L IK+ ID+KKP+KR                               H I+EC+           + +E+EL +GPW+      + +   KK + S
Subjt:  MGCSLIIKIQIDVKKPLKR-------------------------------HTIKECDTC--------NDSKEEELLYGPWMHEPVKLKGDLKTKKAASS

A0A392NMN9 Zinc CCHC-type-like protein (Fragment)2.4e-0728.69Show/hide
Query:  KEQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRKS------------------ATKIGSLLGKVEQVDIDEETEPK
        K    +  +  N+FL++F + +    + + GPW +D++LL  + + GD    D++   S                  A K+G LLG    VD+D +   +
Subjt:  KEQTIIDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRKS------------------ATKIGSLLGKVEQVDIDEETEPK

Query:  MGCSLIIKIQIDVKKPLKRHTI
        +G  L +K  ID++KPLKR T+
Subjt:  MGCSLIIKIQIDVKKPLKRHTI

A0A5C7HA62 DUF4283 domain-containing protein2.8e-0830.43Show/hide
Query:  IDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRK------------------SATKIGSLLGKVEQVDIDEETEPKMGCSL
        I+ VG NIF++ F N   +  I + GPW++DKSL+  E+  G  N   + F K                  +A  +   +G+V  +DI  E++   G  +
Subjt:  IDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDFRK------------------SATKIGSLLGKVEQVDIDEETEPKMGCSL

Query:  IIKIQIDVKKPLKRHTIKECDTCND-SKEEELLYGPWM
         +K+QID+ KPLKR    + D  N+    +   +G WM
Subjt:  IIKIQIDVKKPLKRHTIKECDTCND-SKEEELLYGPWM

A0A5C7HLK8 CCHC-type domain-containing protein6.9e-0732.46Show/hide
Query:  IDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDF------------------RKSATKIGSLLGKVEQVDIDEETEPKMGCSL
        I+ VG N+F++KF N   +  I + GPW++DKSL+    L G  N   + F                  R+ A  +   +G+V  +DI  E++   G  L
Subjt:  IDHVGSNIFLYKFKNARIKGYIQEAGPWFYDKSLLAFEELRGDINAEDMDF------------------RKSATKIGSLLGKVEQVDIDEETEPKMGCSL

Query:  IIKIQIDVKKPLKR
         +K+QID+ KPLK+
Subjt:  IIKIQIDVKKPLKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAAAAATTGGTGGCCGGAAAAGTCATCGGCGATCGTCGGAAAAGTCGTCGGCGGTCGTCGGAAAATTCGTCGGAAACTTCGCTGGCTGACGGCGGCCGGCGGTC
GTCGGAAAAGTCAAGGAGTCGCATGGAAGAAAGAGCAGTGGAAGTAGGCGGTGGTTTCTTGCCGGTTGAGGAGCGGTATTATTTGCTTTTGGTTGTTTTTATTCTGGTTT
TCTTTTTTGATCTCATCTGTAGATCGAGTGCAAAGGAACAAACAATCATCGATCATGTAGGCTCAAATATATTTCTTTACAAGTTCAAGAATGCAAGGATAAAGGGATAC
ATACAAGAAGCAGGGCCTTGGTTCTATGACAAGTCCCTTCTTGCGTTTGAAGAACTGAGAGGCGATATAAATGCTGAAGACATGGATTTCAGGAAGTCGGCAACAAAAAT
TGGTAGTCTTCTAGGAAAAGTCGAACAAGTAGATATAGATGAGGAGACGGAACCAAAGATGGGATGTTCTCTCATAATCAAAATCCAAATTGATGTGAAAAAACCTTTGA
AACGACATACTATCAAAGAATGTGATACGTGTAATGATTCAAAAGAAGAGGAGCTGTTGTATGGACCATGGATGCATGAACCGGTGAAACTCAAAGGAGATCTTAAAACC
AAAAAAGCAGCCTCAAGTGAAGAGATTTTAGAGACTAACGGGAAGAAAAATAATTACTCAATGATGGAGCTAGATTTAAATTATGATGGAGAAAAAAAGGAAAACAAGAA
TGTCAACACCCGGGAAACAGCGAGACCAATAGCAGAGAGGGATAAAAATGAAGAGATTAAATTAAATGAGGAGAATCCCATCACACACAATAGAAAGGAAGCTAAATGGA
AGAGGGTCCCACGACAACCAATAGAGGAAATGTCAAATAAGGTGATGAATGATATGCTACAGAAAGTGTCAGGAAGCAAACATATGACAGAACGAGAAGAGGAAAGTGAC
AGAGAGAAAAAGGTGATGAAAACAGTGAAAAATGAAAATGCGATATCGGTGGAGGTTGCTGGACAACCCCGTCGGGCACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAAAAATTGGTGGCCGGAAAAGTCATCGGCGATCGTCGGAAAAGTCGTCGGCGGTCGTCGGAAAATTCGTCGGAAACTTCGCTGGCTGACGGCGGCCGGCGGTC
GTCGGAAAAGTCAAGGAGTCGCATGGAAGAAAGAGCAGTGGAAGTAGGCGGTGGTTTCTTGCCGGTTGAGGAGCGGTATTATTTGCTTTTGGTTGTTTTTATTCTGGTTT
TCTTTTTTGATCTCATCTGTAGATCGAGTGCAAAGGAACAAACAATCATCGATCATGTAGGCTCAAATATATTTCTTTACAAGTTCAAGAATGCAAGGATAAAGGGATAC
ATACAAGAAGCAGGGCCTTGGTTCTATGACAAGTCCCTTCTTGCGTTTGAAGAACTGAGAGGCGATATAAATGCTGAAGACATGGATTTCAGGAAGTCGGCAACAAAAAT
TGGTAGTCTTCTAGGAAAAGTCGAACAAGTAGATATAGATGAGGAGACGGAACCAAAGATGGGATGTTCTCTCATAATCAAAATCCAAATTGATGTGAAAAAACCTTTGA
AACGACATACTATCAAAGAATGTGATACGTGTAATGATTCAAAAGAAGAGGAGCTGTTGTATGGACCATGGATGCATGAACCGGTGAAACTCAAAGGAGATCTTAAAACC
AAAAAAGCAGCCTCAAGTGAAGAGATTTTAGAGACTAACGGGAAGAAAAATAATTACTCAATGATGGAGCTAGATTTAAATTATGATGGAGAAAAAAAGGAAAACAAGAA
TGTCAACACCCGGGAAACAGCGAGACCAATAGCAGAGAGGGATAAAAATGAAGAGATTAAATTAAATGAGGAGAATCCCATCACACACAATAGAAAGGAAGCTAAATGGA
AGAGGGTCCCACGACAACCAATAGAGGAAATGTCAAATAAGGTGATGAATGATATGCTACAGAAAGTGTCAGGAAGCAAACATATGACAGAACGAGAAGAGGAAAGTGAC
AGAGAGAAAAAGGTGATGAAAACAGTGAAAAATGAAAATGCGATATCGGTGGAGGTTGCTGGACAACCCCGTCGGGCACAATGA
Protein sequenceShow/hide protein sequence
MEKKLVAGKVIGDRRKSRRRSSENSSETSLADGGRRSSEKSRSRMEERAVEVGGGFLPVEERYYLLLVVFILVFFFDLICRSSAKEQTIIDHVGSNIFLYKFKNARIKGY
IQEAGPWFYDKSLLAFEELRGDINAEDMDFRKSATKIGSLLGKVEQVDIDEETEPKMGCSLIIKIQIDVKKPLKRHTIKECDTCNDSKEEELLYGPWMHEPVKLKGDLKT
KKAASSEEILETNGKKNNYSMMELDLNYDGEKKENKNVNTRETARPIAERDKNEEIKLNEENPITHNRKEAKWKRVPRQPIEEMSNKVMNDMLQKVSGSKHMTEREEESD
REKKVMKTVKNENAISVEVAGQPRRAQ