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Lag0006298 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006298
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAuxin-responsive protein
Genome locationchr6:40842010..40842438
RNA-Seq ExpressionLag0006298
SyntenyLag0006298
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586078.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5482.39Show/hide
Query:  MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGP----------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG-
        MNTFHS TQSP  AAAAAAEYFKMRRWPE +LGP           ++ EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DDGG 
Subjt:  MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGP----------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG-

Query:  GGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW
        GGGGGGE SG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  GGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW

KAG7020902.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5481.82Show/hide
Query:  MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGP----------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG-
        MN FHS TQSP  AAAAAAEYFKMRRWPE +LGP           ++ EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DDGG 
Subjt:  MNTFHSQTQSP--AAAAAAEYFKMRRWPERRLGP----------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG-

Query:  GGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWK
        GGGGGGE SG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNWK
Subjt:  GGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNWK

XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]1.1e-5584.78Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG-GGGG
        MNTFHS TQSPAAAAAAEYFKMRRWPE +LGP         Q  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DDGG G GG
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG-GGGG

Query:  GGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW
        GGE SG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  GGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW

XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]1.2e-5282.01Show/hide
Query:  MNTFHSQTQSP-AAAAAAEYFKMRRWPERRLGP---------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGG
        MNTFHS TQSP AAAAAAEYFKMRRWPE +LGP          ++ EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DD    G
Subjt:  MNTFHSQTQSP-AAAAAAEYFKMRRWPERRLGP---------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGG

Query:  GGGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW
        GGGE SGER+LDL NAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  GGGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW

XP_038890972.1 auxin-responsive protein IAA33 [Benincasa hispida]2.1e-5487.22Show/hide
Query:  MNTFHSQ-TQSPAAAAAAEYFKMRRWPERRLGPAQQAE---EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESS
        MN F S+ TQSPAAAAAAE FKMRRWPERR+GP QQAE   EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD++D  GGGGGGE+S
Subjt:  MNTFHSQ-TQSPAAAAAAEYFKMRRWPERRLGPAQQAE---EEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESS

Query:  GERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW
        GER+LDLTNAVPGH+VAYEDIENDLLLAGDLNW
Subjt:  GERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW

TrEMBL top hitse value%identityAlignment
A0A1S3BRI6 Auxin-responsive protein1.9e-4885.25Show/hide
Query:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLTNAV
        TQSPAAAAAAEYFKM RW ERR+GP QQA EEDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVD+DD       GE SGERRLDLTNAV
Subjt:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLTNAV

Query:  PGHLVAYEDIENDLLLAGDLNW
        PG++VAYEDIENDLLLAGDLNW
Subjt:  PGHLVAYEDIENDLLLAGDLNW

A0A5A7UPU6 Auxin-responsive protein2.0e-5083.72Show/hide
Query:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLTNAV
        TQSPAAAAAAEYFKM RW ERR+GP QQA EEDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVD+DD       GE SGERRLDLTNAV
Subjt:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLTNAV

Query:  PGHLVAYEDIENDLLLAGDLNWKLVPPIF
        PG++VAYEDIENDLLLAGDLNWKLV  +F
Subjt:  PGHLVAYEDIENDLLLAGDLNWKLVPPIF

A0A5D3BTE4 Auxin-responsive protein9.0e-5184.5Show/hide
Query:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLTNAV
        TQSPAAAAAAEYFKM RW ERR+GP QQA EEDFAAVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVD+DD       GE SGERRLDLTNAV
Subjt:  TQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLTNAV

Query:  PGHLVAYEDIENDLLLAGDLNWKLVPPIF
        PG++VAYEDIENDLLLAGDLNWKLV  +F
Subjt:  PGHLVAYEDIENDLLLAGDLNWKLVPPIF

A0A6J1FIF6 Auxin-responsive protein4.8e-5281.12Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLG--PAQQ-----------AEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG
        MNTFHS TQSP  AAAAEYFKMRRWPE +LG  P QQ            EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DDGG
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLG--PAQQ-----------AEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG

Query:  -GGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW
         GGGGGGE S +R+LDL NAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  -GGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW

A0A6J1I3D9 Auxin-responsive protein5.4e-5684.78Show/hide
Query:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG-GGGG
        MNTFHS TQSPAAAAAAEYFKMRRWPE +LGP         Q  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD+DDGG G GG
Subjt:  MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGP--------AQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGG-GGGG

Query:  GGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW
        GGE SG+R+LDL NAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  GGESSGERRLDLTNAVPGHLVAYEDIENDLLLAGDLNW

SwissProt top hitse value%identityAlignment
Q9FKM7 Auxin-responsive protein IAA333.3e-2651.59Show/hide
Query:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLT
        H+ + S + AA   +           G     E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD         G +S+ +  LDL+
Subjt:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLT

Query:  NAVPGHLVAYEDIENDLLLAGDLNWK
        NA+PGHL+AYED+ENDLLLAGDL WK
Subjt:  NAVPGHLVAYEDIENDLLLAGDLNWK

Q9ZSY8 Auxin-responsive protein IAA272.7e-0431.19Show/hide
Query:  PAQQAEEEDFAAVIPP------VTVVLEGRAICQRISLHKHASYESLAKALRRM---FVDEDDGGGGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLL
        P   +E E+  A   P      V V +EG    ++I L  + SY  L+ AL +M   F     G  GG G +   E RL        ++V YED ++D +
Subjt:  PAQQAEEEDFAAVIPP------VTVVLEGRAICQRISLHKHASYESLAKALRRM---FVDEDDGGGGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLL

Query:  LAGDLNWKL
        L GD+ W++
Subjt:  LAGDLNWKL

Arabidopsis top hitse value%identityAlignment
AT4G29080.1 phytochrome-associated protein 21.9e-0531.19Show/hide
Query:  PAQQAEEEDFAAVIPP------VTVVLEGRAICQRISLHKHASYESLAKALRRM---FVDEDDGGGGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLL
        P   +E E+  A   P      V V +EG    ++I L  + SY  L+ AL +M   F     G  GG G +   E RL        ++V YED ++D +
Subjt:  PAQQAEEEDFAAVIPP------VTVVLEGRAICQRISLHKHASYESLAKALRRM---FVDEDDGGGGGGGGESSGERRLDLTNAVPGHLVAYEDIENDLL

Query:  LAGDLNWKL
        L GD+ W++
Subjt:  LAGDLNWKL

AT5G57420.1 indole-3-acetic acid inducible 332.3e-2751.59Show/hide
Query:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLT
        H+ + S + AA   +           G     E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD         G +S+ +  LDL+
Subjt:  HSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLT

Query:  NAVPGHLVAYEDIENDLLLAGDLNWK
        NA+PGHL+AYED+ENDLLLAGDL WK
Subjt:  NAVPGHLVAYEDIENDLLLAGDLNWK

AT5G65670.1 indole-3-acetic acid inducible 91.6e-0429.55Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVD---EDDGGGGGGGGESSGERRL-DLTNAVPGHLVAYEDIENDLLLAGDLNWKL
        V V ++G    +++ L  + +Y  L+ AL +MF        G  G  G +   E +L DL N    +++ YED + D +L GD+ W++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVD---EDDGGGGGGGGESSGERRL-DLTNAVPGHLVAYEDIENDLLLAGDLNWKL

AT5G65670.2 indole-3-acetic acid inducible 91.6e-0429.55Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVD---EDDGGGGGGGGESSGERRL-DLTNAVPGHLVAYEDIENDLLLAGDLNWKL
        V V ++G    +++ L  + +Y  L+ AL +MF        G  G  G +   E +L DL N    +++ YED + D +L GD+ W++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVD---EDDGGGGGGGGESSGERRL-DLTNAVPGHLVAYEDIENDLLLAGDLNWKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACCTTCCACTCTCAAACACAATCCCCGGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCCGGCGCAGCAGGCGGA
GGAGGAGGATTTTGCGGCGGTCATTCCGCCGGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTGGCCA
AGGCCCTCAGACGGATGTTCGTCGACGAAGACGACGGCGGTGGCGGTGGCGGTGGAGGGGAATCGTCCGGCGAGCGGCGGCTGGACCTGACGAACGCCGTTCCGGGTCAT
CTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAAGTTAGTGCCCCCCATTTTTCTCTCTCTTTTCTTCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACACCTTCCACTCTCAAACACAATCCCCGGCCGCCGCCGCCGCCGCCGAGTACTTCAAGATGAGGCGGTGGCCGGAGAGGCGACTGGGTCCGGCGCAGCAGGCGGA
GGAGGAGGATTTTGCGGCGGTCATTCCGCCGGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTGGCCA
AGGCCCTCAGACGGATGTTCGTCGACGAAGACGACGGCGGTGGCGGTGGCGGTGGAGGGGAATCGTCCGGCGAGCGGCGGCTGGACCTGACGAACGCCGTTCCGGGTCAT
CTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAATTGGAAGTTAGTGCCCCCCATTTTTCTCTCTCTTTTCTTCAATTAG
Protein sequenceShow/hide protein sequence
MNTFHSQTQSPAAAAAAEYFKMRRWPERRLGPAQQAEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDEDDGGGGGGGGESSGERRLDLTNAVPGH
LVAYEDIENDLLLAGDLNWKLVPPIFLSLFFN