CuGenDBv2

Gene ID	Lag0006305
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Chlorophyll A-B binding protein
Genome location	chr6:40925473..40929233
RNA-Seq Expression	Lag0006305
Synteny	Lag0006305
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR022796 - Chlorophyll A-B binding protein IPR023329 - Chlorophyll a/b binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008451793.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo]

4.0e-56

81.63

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Query:  ASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        AS +LILPI G NLP SQYLSFRHSHPSAT SR GWSRDQ  G+STHRTRGQAFRI    NVS  K GLIK+VIMVDPLEAKRMAAKEMEKIKAKEKFKR
Subjt:  ASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ
        RRQIEAINGAWAMIGLTAGLV+EGQTGKGILAQLA YF  +++FF++
Subjt:  RRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

XP_022937783.1 uncharacterized protein LOC111444076 isoform X1 [Cucurbita moschata]

1.5e-58

83.78

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Query:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK
        MASTALILPI G N      LSFRH+HPSAT SRWGW+RDQ  GKSTHRTRGQAFRILANPNVS GK  LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFK
Subjt:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK

Query:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ
        RRRQIEAINGAWAMIGLTAGL++EGQTGKGILAQLAGY  AVV+FFV+
Subjt:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

XP_022969695.1 uncharacterized protein LOC111468645 isoform X1 [Cucurbita maxima]

1.0e-59

84.46

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Query:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK
        MASTALILPI G N  SSQ LSFRH+H SAT SRWGWSRD+  G STHRTRGQAFRILANPNVS GK  LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFK
Subjt:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK

Query:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ
        RRRQIEAINGAWAMIGLTAGL++EGQTGKGILAQLAGY  AVV+FFV+
Subjt:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

XP_023538319.1 uncharacterized protein LOC111799137 isoform X1 [Cucurbita pepo subsp. pepo]

8.6e-59

83.78

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Query:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK
        MASTALILPI G N      LSFRH+HPSAT SRWGW+RDQ  GKSTHRTRGQAFRILANPNVS GK  LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFK
Subjt:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK

Query:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ
        RRRQIEAINGAWAMIGLTAGL++EGQTGKGILAQLAGY  AVV+FFV+
Subjt:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

XP_038889814.1 uncharacterized protein LOC120079625 [Benincasa hispida]

1.4e-56

81.63

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Query:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK
        MAST+LILPIKG NLP SQYLSFRH+HPSAT SR GWSRDQ  G+STHRTRGQAF+I    NVS GK  LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFK
Subjt:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK

Query:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFV
        R+RQIEAINGAWAMIGLTAGLV+EGQTGKGILAQL GYF  V++FF+
Subjt:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH95 Uncharacterized protein

2.6e-53

80.27

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Query:  ASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        ASTALILPI G NLP SQYLSFRH+ PSAT SR GWSRD  AG+ST RTRGQAFRI    NVS G+ GLIK+VIMVDPLEAKRMAAKEMEKIKAKEKFKR
Subjt:  ASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ
        RRQIEAINGAWAMIGLTAGLV+EG+TGKGILAQLA YF  +++FF++
Subjt:  RRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

A0A1S3BSE0 uncharacterized protein LOC103492970 isoform X1

1.9e-56

81.63

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Query:  ASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKR
        AS +LILPI G NLP SQYLSFRHSHPSAT SR GWSRDQ  G+STHRTRGQAFRI    NVS  K GLIK+VIMVDPLEAKRMAAKEMEKIKAKEKFKR
Subjt:  ASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKR

Query:  RRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ
        RRQIEAINGAWAMIGLTAGLV+EGQTGKGILAQLA YF  +++FF++
Subjt:  RRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

A0A6J1DIT0 uncharacterized protein LOC111020859

3.1e-54

79.05

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Query:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK
        MASTAL          SSQYLSFRH+HP AT SRWGW+RDQ  GK THRTRGQAFRILANPNVS GK G +KEVIMVDPLEAKRMAAK+MEKIKAKEK K
Subjt:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK

Query:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ
        RRRQIEAINGAWAMIGLTAGLV+EGQTGKGILAQL  YF  VV  FV+
Subjt:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

A0A6J1FC77 uncharacterized protein LOC111444076 isoform X1

7.1e-59

83.78

Show/hide

Query:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK
        MASTALILPI G N      LSFRH+HPSAT SRWGW+RDQ  GKSTHRTRGQAFRILANPNVS GK  LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFK
Subjt:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK

Query:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ
        RRRQIEAINGAWAMIGLTAGL++EGQTGKGILAQLAGY  AVV+FFV+
Subjt:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

A0A6J1I0N1 uncharacterized protein LOC111468645 isoform X1

4.9e-60

84.46

Show/hide

Query:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK
        MASTALILPI G N  SSQ LSFRH+H SAT SRWGWSRD+  G STHRTRGQAFRILANPNVS GK  LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFK
Subjt:  MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFK

Query:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ
        RRRQIEAINGAWAMIGLTAGL++EGQTGKGILAQLAGY  AVV+FFV+
Subjt:  RRRQIEAINGAWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G28025.1 unknown protein

2.4e-30

60.63

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Query:  RHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVS----SGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTA
        R + PS++L + G  R Q A    +R R    R+LANPNVS     GK  + KEVIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGAWA+IGL  
Subjt:  RHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVS----SGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTA

Query:  GLVMEGQTGKGILAQLAGYFGAVVDFF
        GLV+E QTGKGILAQLAGY+ AVV  F
Subjt:  GLVMEGQTGKGILAQLAGYFGAVVDFF

AT4G28025.2 unknown protein.

4.0e-30

61.48

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Query:  SATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVS----SGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVME
        S++  R G  R Q A    +R R    R+LANPNVS     GK  + KEVIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGAWA+IGL  GLV+E
Subjt:  SATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVS----SGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVME

Query:  GQTGKGILAQLAGYFGAVVDFF
         QTGKGILAQLAGY+ AVV  F
Subjt:  GQTGKGILAQLAGYFGAVVDFF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCCACTGCGCTGATTCTCCCCATCAAAGGACCAAACCTTCCGTCTTCCCAATACCTCTCTTTCCGCCATAGCCATCCTTCTGCAACTCTCTCCAGGTGGGGTTG
GAGTAGGGACCAAGTTGCAGGCAAAAGTACACACAGAACGAGGGGTCAAGCATTTCGAATCTTGGCTAACCCTAATGTCTCTAGTGGGAAAGGTGGCTTAATTAAGGAGG
TTATTATGGTCGATCCTTTGGAAGCCAAACGTATGGCTGCGAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAAGAGAAGACGTCAAATAGAAGCGATAAATGGA
GCATGGGCAATGATTGGTCTCACGGCAGGGCTCGTCATGGAAGGTCAAACTGGAAAAGGCATTCTAGCACAGTTGGCTGGCTACTTTGGTGCCGTTGTCGACTTCTTTGT
ACAATAG

mRNA sequence

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Protein sequence

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MASTALILPIKGPNLPSSQYLSFRHSHPSATLSRWGWSRDQVAGKSTHRTRGQAFRILANPNVSSGKGGLIKEVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAING
AWAMIGLTAGLVMEGQTGKGILAQLAGYFGAVVDFFVQ

Lag0006305 (gene) of Sponge gourd (AG-4) v1 genome