; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006307 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006307
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:40997347..41002197
RNA-Seq ExpressionLag0006307
SyntenyLag0006307
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.8e-4241.33Show/hide
Query:  RRTFKTAWNIS-NALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQ
        + T K AW +   A  V+ +G N+FLF+    SD+ R LR GPW FD+ L+++  P+ + KP  M+F   + WVHF DL +   N++MA  LGNAIG F+
Subjt:  RRTFKTAWNIS-NALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQ

Query:  DYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATS
        D ++  + + W   LRV++  D+ KP  RGIK+  D P+G  W PI+YE+LP+   +CGR+ H  K C+   +D  S S+ L+YG W+ F G   S
Subjt:  DYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.5e-4845.73Show/hide
Query:  LVAREGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGN
        +++ +   R    AW + + L VE +G NLFLF    E D  R ++ GPW FDK L+VL KP      + +EFN   FW+H  DLPM   N++MA  LGN
Subjt:  LVAREGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGN

Query:  AIGQFQDYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQL-EYGVWMAFTG
        AIG F D D    G+ W  SLR+++ +DITKP RRGIK+  D P+G  W PI+YE+LP+ C +CG IGH +  C   YL A+  SR   EYG W+ F G
Subjt:  AIGQFQDYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQL-EYGVWMAFTG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]5.5e-3832.99Show/hide
Query:  RRTFKTAWNI-SNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQ
        + T +TAW + +NA  V+ LG NLFLFS     D+ +  + GPW FD+ L++++KP+ ++ P+ ++F     WV F DLP+    R MA  LGNA+G F+
Subjt:  RRTFKTAWNI-SNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQ

Query:  DYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATSV---
        + D       W  +LRV++ LDI+KP RRGIK+  D P+G  W PI+YE+LP+ C +CG                 SS ++ +YG W+ + G        
Subjt:  DYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATSV---

Query:  FRSPSTSPLN---NNRLMMEVSPSQNGSSPTAHVMAADLPPVDGQA-ARSSPLTGSGSRQMDISPAYL-TGDDSVTKKYASKLGPGIK
         + P    L+   NN      SP   GS       A     +  ++    +P  G+   Q   SP  +  G+  +  K  S L P +K
Subjt:  FRSPSTSPLN---NNRLMMEVSPSQNGSSPTAHVMAADLPPVDGQA-ARSSPLTGSGSRQMDISPAYL-TGDDSVTKKYASKLGPGIK

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]1.5e-3537.24Show/hide
Query:  EGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQ
        E  + T  + W  +  + V  +G NLF+F      D+ R L  GPW FDK LL+L +  P V+P+ ++  +  FWVH C+LP+ L N+ + + +GNA+GQ
Subjt:  EGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQ

Query:  FQDYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSR------QLEYGVWM
        F D D    G  W  ++ +++ LD+ KP RRG+K+     +  +W   KYE+LP  C +CGR+GH  + C     DAK SS        L+YG W+
Subjt:  FQDYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSR------QLEYGVWM

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]2.5e-3538.34Show/hide
Query:  EGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQ
        E  + T  + W  +  + V  +G NLF+F      D+ R L  GPW FDK LL+L +  P V+P+ ++     FWVH C+LP+ L N+ + E +GNA+GQ
Subjt:  EGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQ

Query:  FQDYDNGGHGYGWKESLRVKITLDITKPFRRGIK--VRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSS-RQLEYGVWM
        F D D    G  W  ++R+++ LD+ KP RRG+K  +   EP   +W   KYE+LP  C +CGR+GH  + C      A  S    L+YG W+
Subjt:  FQDYDNGGHGYGWKESLRVKITLDITKPFRRGIK--VRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSS-RQLEYGVWM

TrEMBL top hitse value%identityAlignment
A0A314YVX1 CCHC-type domain-containing protein3.1e-3135.41Show/hide
Query:  REGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIG
        RE  ++T    WN +  ++V+ LG NLFLF   +E D+ + LR GPW FDK L++L  P   V P+ M   +A FW+   ++P+     +M   +GN++G
Subjt:  REGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIG

Query:  QFQDYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSV-WTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATS
        +  D   G  G      LR+++ LD++KP  RG K+    P G+  +   +YE+LPE C  CGR+GH  K C F+   AK +  +  YG+W+  T    S
Subjt:  QFQDYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSV-WTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATS

Query:  VFRSPSTSP
           + S  P
Subjt:  VFRSPSTSP

A0A6J1BSZ1 uncharacterized protein LOC1110054811.4e-4241.33Show/hide
Query:  RRTFKTAWNIS-NALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQ
        + T K AW +   A  V+ +G N+FLF+    SD+ R LR GPW FD+ L+++  P+ + KP  M+F   + WVHF DL +   N++MA  LGNAIG F+
Subjt:  RRTFKTAWNIS-NALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQ

Query:  DYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATS
        D ++  + + W   LRV++  D+ KP  RGIK+  D P+G  W PI+YE+LP+   +CGR+ H  K C+   +D  S S+ L+YG W+ F G   S
Subjt:  DYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATS

A0A6J1D765 uncharacterized protein LOC1110179022.2e-3234.62Show/hide
Query:  VAREGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNA
        ++ E  R   K+ W + N+   E LG N+++   +S S+++R L  GPW F+K LLVL+ P    +P  M FNF  FW+   ++P +  +  MA  LG  
Subjt:  VAREGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNA

Query:  IGQFQDYDNGGHGYGWK-ESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRA
        +G  ++ +  G   GW    +RV++ +D++KP RRGIK+++ +    +W P++YEKLP+ C  CG+IGH  + C        ++S + +YG W+    RA
Subjt:  IGQFQDYDNGGHGYGWK-ESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRA

Query:  TSVFRSPS
        T + +S S
Subjt:  TSVFRSPS

A0A6J1DU55 uncharacterized protein LOC1110231352.2e-4845.73Show/hide
Query:  LVAREGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGN
        +++ +   R    AW + + L VE +G NLFLF    E D  R ++ GPW FDK L+VL KP      + +EFN   FW+H  DLPM   N++MA  LGN
Subjt:  LVAREGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGN

Query:  AIGQFQDYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQL-EYGVWMAFTG
        AIG F D D    G+ W  SLR+++ +DITKP RRGIK+  D P+G  W PI+YE+LP+ C +CG IGH +  C   YL A+  SR   EYG W+ F G
Subjt:  AIGQFQDYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQL-EYGVWMAFTG

A0A6J1DX30 uncharacterized protein LOC1110248742.7e-3832.99Show/hide
Query:  RRTFKTAWNI-SNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQ
        + T +TAW + +NA  V+ LG NLFLFS     D+ +  + GPW FD+ L++++KP+ ++ P+ ++F     WV F DLP+    R MA  LGNA+G F+
Subjt:  RRTFKTAWNI-SNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQ

Query:  DYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATSV---
        + D       W  +LRV++ LDI+KP RRGIK+  D P+G  W PI+YE+LP+ C +CG                 SS ++ +YG W+ + G        
Subjt:  DYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRATSV---

Query:  FRSPSTSPLN---NNRLMMEVSPSQNGSSPTAHVMAADLPPVDGQA-ARSSPLTGSGSRQMDISPAYL-TGDDSVTKKYASKLGPGIK
         + P    L+   NN      SP   GS       A     +  ++    +P  G+   Q   SP  +  G+  +  K  S L P +K
Subjt:  FRSPSTSPLN---NNRLMMEVSPSQNGSSPTAHVMAADLPPVDGQA-ARSSPLTGSGSRQMDISPAYL-TGDDSVTKKYASKLGPGIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein2.2e-1331.51Show/hide
Query:  FLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQDYDNGGHGYGWKESLRVKITLDIT
        F+F+L  E      LR+GPW F+ ++++L +  P +      F F  FWV    +P    NR + E +G A+GQ  D D         +  RV +  DIT
Subjt:  FLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYNRSMAESLGNAIGQFQDYDNGGHGYGWKESLRVKITLDIT

Query:  KPFRRGIKVRHDEPLGSVWTPI--KYEKLPEICGYCGRIGHGTKLC
         P R     RH +    V T +  +YE+L   C  CG + H    C
Subjt:  KPFRRGIKVRHDEPLGSVWTPI--KYEKLPEICGYCGRIGHGTKLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATGGGTAATTTTGGACCACCCCGATGTACAAGGAGCTGACAAAGACAACCGAGCAGAAATCGGACTGGAGGATGGACCCGGGCGGCGAAACGGGCCAGTGGATCA
GGCCAAGACCGAAGGGGTCGGGCTTAACCCGACCCCATGCTCGGCCCGCTTGCGCGGGCCGAGTCCCTCCGACTCCGTTCGGTCCCTGCAGCTTCTAGCCGCACCGGTTC
CGCTTGAAGGGGACCCGAACTCTATTCTCGACTCTCTCTCTTGCTCTCTAGCCCTCCTACTTCTGTTTTATGACTTAAGCATCAGAGGCGGTGTATCTAGCACCACACCG
GTGTGCAGGTTTTCCGTTTTACAGGTCACGTCTTCCCCCTCATCTACAAATTTACTGTTGGTGGCACGTGAAGGTCAGAGGCGGACTTTTAAAACGGCTTGGAACATTTC
GAACGCTCTAATGGTGGAGAAGCTTGGACCTAATCTATTTTTATTCTCTTTACGTTCGGAATCTGATCAAGCTCGTGCGTTGCGTCAAGGACCTTGGCTTTTTGACAAGT
TCCTTCTTGTTTTATCCAAGCCAATTCCCATGGTGAAGCCTACTGCCATGGAGTTCAATTTTGCGACCTTTTGGGTACACTTTTGCGATCTTCCGATGGACCTGTATAAT
CGTTCGATGGCGGAAAGTCTAGGCAATGCGATCGGCCAATTCCAGGACTATGATAATGGGGGCCATGGATATGGATGGAAGGAAAGCCTACGGGTCAAAATCACTCTGGA
TATTACGAAACCTTTTCGCCGAGGTATTAAGGTTCGGCATGATGAGCCTTTGGGGAGTGTCTGGACCCCAATCAAATACGAGAAACTCCCTGAAATATGTGGCTATTGTG
GCAGAATCGGCCATGGGACAAAGCTCTGTACGTTCATTTATCTTGATGCAAAATCATCTTCGAGGCAGCTGGAATATGGAGTATGGATGGCCTTCACGGGCAGAGCAACG
TCTGTTTTCCGGTCACCAAGCACGAGTCCTCTTAATAATAACCGATTGATGATGGAGGTGTCTCCAAGTCAGAATGGGTCTTCGCCGACAGCTCATGTAATGGCTGCTGA
TCTACCTCCTGTGGACGGGCAAGCGGCACGCTCTTCTCCGTTAACCGGATCTGGGAGTCGGCAAATGGATATTTCACCGGCATATCTCACTGGCGATGATTCTGTCACTA
AGAAGTATGCTTCCAAACTGGGCCCTGGAATTAAAGGTTGGAAGCGACGTGCCCGCAAGCCTCCTACTGAATCTGCTAGTAGCGGCAATGTGGAGAATCAGAAAAAGAGA
TTGGGCGAGGGACAAGTGAGCGGCTCTCTAAAGCGTGCTCGAAAGGATGAGGATAATTTATCCATTGACAATGACACGACGGTGGAGGCTGTTGAACAGCCCCGCCGAGA
GCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATGGGTAATTTTGGACCACCCCGATGTACAAGGAGCTGACAAAGACAACCGAGCAGAAATCGGACTGGAGGATGGACCCGGGCGGCGAAACGGGCCAGTGGATCA
GGCCAAGACCGAAGGGGTCGGGCTTAACCCGACCCCATGCTCGGCCCGCTTGCGCGGGCCGAGTCCCTCCGACTCCGTTCGGTCCCTGCAGCTTCTAGCCGCACCGGTTC
CGCTTGAAGGGGACCCGAACTCTATTCTCGACTCTCTCTCTTGCTCTCTAGCCCTCCTACTTCTGTTTTATGACTTAAGCATCAGAGGCGGTGTATCTAGCACCACACCG
GTGTGCAGGTTTTCCGTTTTACAGGTCACGTCTTCCCCCTCATCTACAAATTTACTGTTGGTGGCACGTGAAGGTCAGAGGCGGACTTTTAAAACGGCTTGGAACATTTC
GAACGCTCTAATGGTGGAGAAGCTTGGACCTAATCTATTTTTATTCTCTTTACGTTCGGAATCTGATCAAGCTCGTGCGTTGCGTCAAGGACCTTGGCTTTTTGACAAGT
TCCTTCTTGTTTTATCCAAGCCAATTCCCATGGTGAAGCCTACTGCCATGGAGTTCAATTTTGCGACCTTTTGGGTACACTTTTGCGATCTTCCGATGGACCTGTATAAT
CGTTCGATGGCGGAAAGTCTAGGCAATGCGATCGGCCAATTCCAGGACTATGATAATGGGGGCCATGGATATGGATGGAAGGAAAGCCTACGGGTCAAAATCACTCTGGA
TATTACGAAACCTTTTCGCCGAGGTATTAAGGTTCGGCATGATGAGCCTTTGGGGAGTGTCTGGACCCCAATCAAATACGAGAAACTCCCTGAAATATGTGGCTATTGTG
GCAGAATCGGCCATGGGACAAAGCTCTGTACGTTCATTTATCTTGATGCAAAATCATCTTCGAGGCAGCTGGAATATGGAGTATGGATGGCCTTCACGGGCAGAGCAACG
TCTGTTTTCCGGTCACCAAGCACGAGTCCTCTTAATAATAACCGATTGATGATGGAGGTGTCTCCAAGTCAGAATGGGTCTTCGCCGACAGCTCATGTAATGGCTGCTGA
TCTACCTCCTGTGGACGGGCAAGCGGCACGCTCTTCTCCGTTAACCGGATCTGGGAGTCGGCAAATGGATATTTCACCGGCATATCTCACTGGCGATGATTCTGTCACTA
AGAAGTATGCTTCCAAACTGGGCCCTGGAATTAAAGGTTGGAAGCGACGTGCCCGCAAGCCTCCTACTGAATCTGCTAGTAGCGGCAATGTGGAGAATCAGAAAAAGAGA
TTGGGCGAGGGACAAGTGAGCGGCTCTCTAAAGCGTGCTCGAAAGGATGAGGATAATTTATCCATTGACAATGACACGACGGTGGAGGCTGTTGAACAGCCCCGCCGAGA
GCCATGA
Protein sequenceShow/hide protein sequence
MLWVILDHPDVQGADKDNRAEIGLEDGPGRRNGPVDQAKTEGVGLNPTPCSARLRGPSPSDSVRSLQLLAAPVPLEGDPNSILDSLSCSLALLLLFYDLSIRGGVSSTTP
VCRFSVLQVTSSPSSTNLLLVAREGQRRTFKTAWNISNALMVEKLGPNLFLFSLRSESDQARALRQGPWLFDKFLLVLSKPIPMVKPTAMEFNFATFWVHFCDLPMDLYN
RSMAESLGNAIGQFQDYDNGGHGYGWKESLRVKITLDITKPFRRGIKVRHDEPLGSVWTPIKYEKLPEICGYCGRIGHGTKLCTFIYLDAKSSSRQLEYGVWMAFTGRAT
SVFRSPSTSPLNNNRLMMEVSPSQNGSSPTAHVMAADLPPVDGQAARSSPLTGSGSRQMDISPAYLTGDDSVTKKYASKLGPGIKGWKRRARKPPTESASSGNVENQKKR
LGEGQVSGSLKRARKDEDNLSIDNDTTVEAVEQPRREP