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Lag0006329 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006329
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr6:41325459..41326121
RNA-Seq ExpressionLag0006329
SyntenyLag0006329
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]4.3e-4646.26Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        MK +VP KFK+P  K YDG  D + H++ Y  W D + I++AIRCR FSFTLTGS + WF++LKR+SISSF+EL R F+ Q+ G   + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQ----R
        +  ESL DY+  FN+E LQVEG ++   L+   +G++D++L  S GK    T+ E  SRAQ YMS+ EL+ SKR  +      +  + R  +KR      
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQ----R

Query:  TYDGGRGR---AHPFGKFEKYTPTVVP
          D G+GR     P  KFEKYTPT VP
Subjt:  TYDGGRGR---AHPFGKFEKYTPTVVP

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]3.1e-4446.41Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        MK +VP KFK+PT K +DG  DLV H++AYR WMD + +S+A++CR FS TL+GSA+ WF +LKR SISSF+ L + F+ Q++G R + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKR--SGREHKRHSSVDQDRKKDKRQRTY
        +  ESLHDY+  FNEE LQVEG +   +L+A  + + D+ L  S GK  P T+ E +SRAQKYMS  E   SKR   G++  ++     D+ +  R    
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKR--SGREHKRHSSVDQDRKKDKRQRTY

Query:  DGGRGRAHP
        D    + HP
Subjt:  DGGRGRAHP

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.1e-4646.46Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        MK +   KFK+P    YDG  D + H++AYR W D ++I +AIRCR FSFTLTGSA+ WF +LKR SISSF+EL   F+ Q++G R + KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQRT---
        +  ESL +Y+  FNEE LQVEG ++  AL+A  +G++D+RL  S GK  P T++E +SRAQKYMS  EL+   R     + + S  ++R+ +KR R+   
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQRT---

Query:  -YDGGRGR---AHPFGKFEKYTPTVV
          D G GR     P  KFEK   +++
Subjt:  -YDGGRGR---AHPFGKFEKYTPTVV

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.3e-4647.79Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        M+ +VP KFK+PT K +D   D V H++AYR WMD + +S+A+RCR FS TL GSA+ WF +LKR SISSF+ L R F+ Q++G R + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKR----SGREHKRHSSVD--QDRKKDKR
        +  ESL DY+  FNEE LQVEG ++  +L+A  +G+ D+ L  S GK  P T+ E +SRAQ+YMS  E   SKR       + KR  S D  Q  + +KR
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKR----SGREHKRHSSVD--QDRKKDKR

Query:  QRTYDGGRGRAHPFGKFEKYTPTVVP
         R+      +  P  KFEKYTPT VP
Subjt:  QRTYDGGRGRAHPFGKFEKYTPTVVP

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]9.9e-4347.78Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        M+ +VP KFK+PT K +DG  + V H++AYR WMD + +SDAIRCR FS TL GSA+ WF +LKR SISSF+ L R F+ Q++G R + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQRTYDG
        +  ESLHDY+  FNEE LQ+EG ++  +L+A  +G+ D+ L  S  K  P T+ E +SRAQ+YMS  E   SKR           D  R   KR+R+ D 
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQRTYDG

Query:  GRG
         +G
Subjt:  GRG

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166192.1e-4646.26Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        MK +VP KFK+P  K YDG  D + H++ Y  W D + I++AIRCR FSFTLTGS + WF++LKR+SISSF+EL R F+ Q+ G   + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQ----R
        +  ESL DY+  FN+E LQVEG ++   L+   +G++D++L  S GK    T+ E  SRAQ YMS+ EL+ SKR  +      +  + R  +KR      
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQ----R

Query:  TYDGGRGR---AHPFGKFEKYTPTVVP
          D G+GR     P  KFEKYTPT VP
Subjt:  TYDGGRGR---AHPFGKFEKYTPTVVP

A0A6J1D7D2 uncharacterized protein LOC1110183071.5e-4446.41Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        MK +VP KFK+PT K +DG  DLV H++AYR WMD + +S+A++CR FS TL+GSA+ WF +LKR SISSF+ L + F+ Q++G R + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKR--SGREHKRHSSVDQDRKKDKRQRTY
        +  ESLHDY+  FNEE LQVEG +   +L+A  + + D+ L  S GK  P T+ E +SRAQKYMS  E   SKR   G++  ++     D+ +  R    
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKR--SGREHKRHSSVDQDRKKDKRQRTY

Query:  DGGRGRAHP
        D    + HP
Subjt:  DGGRGRAHP

A0A6J1DWY0 uncharacterized protein LOC1110252932.1e-4647.79Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        M+ +VP KFK+PT K +D   D V H++AYR WMD + +S+A+RCR FS TL GSA+ WF +LKR SISSF+ L R F+ Q++G R + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKR----SGREHKRHSSVD--QDRKKDKR
        +  ESL DY+  FNEE LQVEG ++  +L+A  +G+ D+ L  S GK  P T+ E +SRAQ+YMS  E   SKR       + KR  S D  Q  + +KR
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKR----SGREHKRHSSVD--QDRKKDKR

Query:  QRTYDGGRGRAHPFGKFEKYTPTVVP
         R+      +  P  KFEKYTPT VP
Subjt:  QRTYDGGRGRAHPFGKFEKYTPTVVP

A0A6J1DZ49 uncharacterized protein LOC1110248515.5e-4746.46Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        MK +   KFK+P    YDG  D + H++AYR W D ++I +AIRCR FSFTLTGSA+ WF +LKR SISSF+EL   F+ Q++G R + KP   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQRT---
        +  ESL +Y+  FNEE LQVEG ++  AL+A  +G++D+RL  S GK  P T++E +SRAQKYMS  EL+   R     + + S  ++R+ +KR R+   
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQRT---

Query:  -YDGGRGR---AHPFGKFEKYTPTVV
          D G GR     P  KFEK   +++
Subjt:  -YDGGRGR---AHPFGKFEKYTPTVV

A0A6J1E1E7 uncharacterized protein LOC1110255484.8e-4347.78Show/hide
Query:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ
        M+ +VP KFK+PT K +DG  + V H++AYR WMD + +SDAIRCR FS TL GSA+ WF +LKR SISSF+ L R F+ Q++G R + +P   LLT+KQ
Subjt:  MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQ

Query:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQRTYDG
        +  ESLHDY+  FNEE LQ+EG ++  +L+A  +G+ D+ L  S  K  P T+ E +SRAQ+YMS  E   SKR           D  R   KR+R+ D 
Subjt:  QPDESLHDYITHFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQRTYDG

Query:  GRG
         +G
Subjt:  GRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCCGAGGTGCCCCAGAAGTTCAAGGTACCTACATTTAAACTGTATGATGGCAAGAAAGACCTCGTACAACATATAAACGCCTACAGAAACTGGATGGACTTCCA
CAACATCTCAGATGCAATCAGATGTCGTGCCTTTTCTTTCACTCTAACAGGATCAGCCAAGCAGTGGTTTGAAAGGTTGAAAAGAAGGTCCATCAGCTCTTTCAGGGAAT
TAGGTCGAGTGTTCCTCGCACAGTATATGGGAGCCAGAGAACAGCACAAGCCTCACATCAACCTCTTAACTGTCAAGCAACAACCAGATGAGAGCTTGCACGATTATATA
ACACATTTTAACGAGGAAGCACTGCAGGTTGAGGGATACAGTGAAAGAGCAGCCCTAGTAGCCATCACAGCCGGATTGGAAGATGATAGATTGTTCAATTCAATAGGTAA
GAGCCAACCTCGAACCTATGTCGAGTTTGTTTCCAGGGCACAAAAGTATATGAGCATGGAGGAATTACTGAAATCAAAGAGGTCAGGACGAGAGCACAAGAGACATTCTT
CAGTCGATCAGGACAGAAAGAAAGATAAGAGACAACGGACATACGATGGTGGGCGAGGCCGAGCACATCCTTTCGGTAAGTTCGAGAAATACACACCAACTGTCGTTCCA
TAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCCGAGGTGCCCCAGAAGTTCAAGGTACCTACATTTAAACTGTATGATGGCAAGAAAGACCTCGTACAACATATAAACGCCTACAGAAACTGGATGGACTTCCA
CAACATCTCAGATGCAATCAGATGTCGTGCCTTTTCTTTCACTCTAACAGGATCAGCCAAGCAGTGGTTTGAAAGGTTGAAAAGAAGGTCCATCAGCTCTTTCAGGGAAT
TAGGTCGAGTGTTCCTCGCACAGTATATGGGAGCCAGAGAACAGCACAAGCCTCACATCAACCTCTTAACTGTCAAGCAACAACCAGATGAGAGCTTGCACGATTATATA
ACACATTTTAACGAGGAAGCACTGCAGGTTGAGGGATACAGTGAAAGAGCAGCCCTAGTAGCCATCACAGCCGGATTGGAAGATGATAGATTGTTCAATTCAATAGGTAA
GAGCCAACCTCGAACCTATGTCGAGTTTGTTTCCAGGGCACAAAAGTATATGAGCATGGAGGAATTACTGAAATCAAAGAGGTCAGGACGAGAGCACAAGAGACATTCTT
CAGTCGATCAGGACAGAAAGAAAGATAAGAGACAACGGACATACGATGGTGGGCGAGGCCGAGCACATCCTTTCGGTAAGTTCGAGAAATACACACCAACTGTCGTTCCA
TAG
Protein sequenceShow/hide protein sequence
MKAEVPQKFKVPTFKLYDGKKDLVQHINAYRNWMDFHNISDAIRCRAFSFTLTGSAKQWFERLKRRSISSFRELGRVFLAQYMGAREQHKPHINLLTVKQQPDESLHDYI
THFNEEALQVEGYSERAALVAITAGLEDDRLFNSIGKSQPRTYVEFVSRAQKYMSMEELLKSKRSGREHKRHSSVDQDRKKDKRQRTYDGGRGRAHPFGKFEKYTPTVVP