CuGenDBv2

Gene ID	Lag0006332
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr6:41368631..41370017
RNA-Seq Expression	Lag0006332
Synteny	Lag0006332
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR026960 - Reverse transcriptase zinc-binding domain IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

GAY61101.1 hypothetical protein CUMW_207140, partial [Citrus unshiu]

4.4e-58

32.11

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Query:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY
        +WG+ ++  G RWR+G+GQ ++I K  WIP+  T K +    L  +A V+ L+N ++ W +ELI   F K DA+ I  IP PRR  +D L+WH+ K G Y
Subjt:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY

Query:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP
        TV+SGY+ A+ ++  A  S+ +  +  W  +W   +P KI+IF WR     +P+  NL  R +   P C  CK+  E  FHA+ +C  AKK WR S F  
Subjt:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP

Query:  IPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGF-------------------QGRRSEGGDA
               +    LL       +   ++ F  + W  WN RN+ LF      G+ E   S V +  A    +                   +G      DA
Subjt:  IPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGF-------------------QGRRSEGGDA

Query:  ATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFCS
        ATNS    + +GA+IR+E  +V  T  ++ +F   V   E  A+  GL VA+ A    + +E+DS  V ++VN+ +   SE+  +V EI+++ +  +  S
Subjt:  ATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFCS

Query:  VSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSI
          +  R  N +AH+ AKL LE+    +W    P  +
Subjt:  VSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSI

ONK66393.1 uncharacterized protein A4U43_C06F7380 [Asparagus officinalis]

7.0e-56

31.53

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Query:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY
        +WGK +L  G+RWRVGDG  I +  D+WIP+  T +VI +  +   A V  L+ P  +W  ELI  LF   +A  IL IP PR  G D L+WHY K+G Y
Subjt:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY

Query:  TVRSGYKLAVRLKNE-------AGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQW
        +V+SGY +A + +N        +   N  +  + WK +WG  +PNKIK+F WR    FIP A  L  + V +   C  CK   E+  HA+W+C   KK W
Subjt:  TVRSGYKLAVRLKNE-------AGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQW

Query:  RASPFFPIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEG--DAGGRDEEGWSWVTEYLAHFRGFQG------------------
        + +    +      R    L    +   +   LE F +LSW++W+ RNK ++     DA    E    W   +L + +G  G                  
Subjt:  RASPFFPIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEG--DAGGRDEEGWSWVTEYLAHFRGFQG------------------

Query:  ---RRSEGG------DAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVG
           R+   G      D A + +      GA++R+ER   +  +       L   + E LA+  GL      GF  + +E DS  V   +N S  DLS  G
Subjt:  ---RRSEGG------DAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVG

Query:  SLVDEIKQILKGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFSEVLS
         L+DE K ++     CS  +  RV N+ AH  A+  L       W   VP  ++ +   E  S
Subjt:  SLVDEIKQILKGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFSEVLS

XP_023904177.1 uncharacterized protein LOC112015942 [Quercus suber]

3.5e-63

35.84

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Query:  LLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGL-VPEAKVNILLNPDS-SWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCYTVR
        +L  G  WRVGDG SI I  D+WIP+  T KV+++ G+ V E  V  L+ PDS  WK +LI + F +EDA+AI  IP  RR   D+++W + K+G Y+V+
Subjt:  LLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGL-VPEAKVNILLNPDS-SWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCYTVR

Query:  SGYKLA---VRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP
        SGY +A   +R +N A CS  +  ++ WK +W   +PNKIKIF WR     +PT +NL  R +     C  C    E   H IWEC  A+  W  S    
Subjt:  SGYKLA---VRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP

Query:  IPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGW------SWVTEYLA---HFRGFQGRRSEGG------------
           P       +L  +    L    +  F+V +W +W++RN  L      G   E GW       W+ E+          Q R + G             
Subjt:  IPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGW------SWVTEYLA---HFRGFQGRRSEGG------------

Query:  --DAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGM
          DAA  + +  S  GA+IRNE  EV+  +  +   V   D  ETLA R+ +  A  AGF+ L +E DS  V   ++SS  DLS VG++V +IK ++ G+
Subjt:  --DAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGM

Query:  EFCSVSWCRRVANRVAHAAAKLV--LEEGVQGIWLEDVPTSIAEVYFSEVLS
           S SW  R  NRVAHA AK    LEE +   W+ED P    +  F + +S
Subjt:  EFCSVSWCRRVANRVAHAAAKLV--LEEGVQGIWLEDVPTSIAEVYFSEVLS

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]

2.6e-58

31.64

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Query:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY
        +WG+ +L +G RWR+G+GQ++ +  + WIPR +T K I    +  +  V  L++    W+++LI   FR EDAEAI+ IP P+R  +D L+WHY+K G Y
Subjt:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY

Query:  TVRSGYKLAVRLK--NEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPF
        +V+SGY++A+R+K   +  CSN D  +  W+ +W   IP K+KIF WR  H+ +PTA NL  + V   PMC  C    ET  HA+ EC  A+K WR S  
Subjt:  TVRSGYKLAVRLK--NEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPF

Query:  F-PIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGFQ-------------------------
           + G         L +W   +  +   E    L W +W  RNK LF      G+ E     V    A    F+                         
Subjt:  F-PIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGFQ-------------------------

Query:  -GRRSEGGDAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIK
         G +    DAA +   Q + +G ++R+          + +R    V   E  A+  GL VA  A  +    E+DS  V  ++N     L+E+G L+ +I+
Subjt:  -GRRSEGGDAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIK

Query:  QILKGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFS
        + L+  +        R  N  AH+ AKL L++    IWL+++P  I  ++ S
Subjt:  QILKGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFS

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]

5.2e-59

31.26

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Query:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY
        +WG+ ++  G RWR+G+GQ ++I K  WIP+  T K +    +  EA V+ L+N ++ W +ELI   F K DA+ I  IP PRR+ +D L+WH+ K G Y
Subjt:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY

Query:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP
        TV+SGY+ A++++  A  S+ +  +  W  +W   +P KI+IF WR     +P+A NL  R +   P C  CK+  E  FHA+ +C  AKK WR S F+ 
Subjt:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP

Query:  IPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGFQ----------GRRSE-------------
               +    LL       +   ++ F V+ W  WN RN+ LF      G+ E   S V +  A    ++          G++ +             
Subjt:  IPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGFQ----------GRRSE-------------

Query:  ---GGDAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQIL
             DAATNS    + +GA+IR+E  +V  T  ++ +F   V   E  A+  GL VA+ A    + +E+DS  V ++VN+ +   SE+  +V EI+++ 
Subjt:  ---GGDAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQIL

Query:  KGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFSEV
        +  +  S  +  R  N +AH+  K+ LE+    +W    P  +     S++
Subjt:  KGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFSEV

TrEMBL top hits

e value

%identity

Alignment

A0A2H5Q972 Uncharacterized protein (Fragment)

2.1e-58

32.11

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Query:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY
        +WG+ ++  G RWR+G+GQ ++I K  WIP+  T K +    L  +A V+ L+N ++ W +ELI   F K DA+ I  IP PRR  +D L+WH+ K G Y
Subjt:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY

Query:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP
        TV+SGY+ A+ ++  A  S+ +  +  W  +W   +P KI+IF WR     +P+  NL  R +   P C  CK+  E  FHA+ +C  AKK WR S F  
Subjt:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP

Query:  IPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGF-------------------QGRRSEGGDA
               +    LL       +   ++ F  + W  WN RN+ LF      G+ E   S V +  A    +                   +G      DA
Subjt:  IPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGF-------------------QGRRSEGGDA

Query:  ATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFCS
        ATNS    + +GA+IR+E  +V  T  ++ +F   V   E  A+  GL VA+ A    + +E+DS  V ++VN+ +   SE+  +V EI+++ +  +  S
Subjt:  ATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFCS

Query:  VSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSI
          +  R  N +AH+ AKL LE+    +W    P  +
Subjt:  VSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSI

A0A5P1EL44 Uncharacterized protein

3.4e-56

31.53

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Query:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY
        +WGK +L  G+RWRVGDG  I +  D+WIP+  T +VI +  +   A V  L+ P  +W  ELI  LF   +A  IL IP PR  G D L+WHY K+G Y
Subjt:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY

Query:  TVRSGYKLAVRLKNE-------AGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQW
        +V+SGY +A + +N        +   N  +  + WK +WG  +PNKIK+F WR    FIP A  L  + V +   C  CK   E+  HA+W+C   KK W
Subjt:  TVRSGYKLAVRLKNE-------AGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQW

Query:  RASPFFPIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEG--DAGGRDEEGWSWVTEYLAHFRGFQG------------------
        + +    +      R    L    +   +   LE F +LSW++W+ RNK ++     DA    E    W   +L + +G  G                  
Subjt:  RASPFFPIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEG--DAGGRDEEGWSWVTEYLAHFRGFQG------------------

Query:  ---RRSEGG------DAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVG
           R+   G      D A + +      GA++R+ER   +  +       L   + E LA+  GL      GF  + +E DS  V   +N S  DLS  G
Subjt:  ---RRSEGG------DAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVG

Query:  SLVDEIKQILKGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFSEVLS
         L+DE K ++     CS  +  RV N+ AH  A+  L       W   VP  ++ +   E  S
Subjt:  SLVDEIKQILKGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFSEVLS

A0A803Q1K6 Uncharacterized protein

8.6e-60

32.05

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Query:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY
        +WGK L+ +G RWRVG+G+S+ + +D W+PR  T KV     L     V  L   D  W +  I S+F   DA+ ILGIP      +D +LWHY K+G Y
Subjt:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY

Query:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLK-EETSFHAIWECGWAKKQWRASPFF
        +V+SGY++A  L  E   SN+  + +WWK +W    P K+K F W++ H ++P  VNL  RG+  S +CSRC    EE+  HA+WEC  +K  WR S  +
Subjt:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLK-EETSFHAIWECGWAKKQWRASPFF

Query:  PIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGFQGRRSEGGDAATNSYTQSSSIGAIIRNE
                     +L   +   +   LE F+++SW +WN RN  +   G    + EE   W   +LA+FRG  GR             +SS     +   
Subjt:  PIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGFQGRRSEGGDAATNSYTQSSSIGAIIRNE

Query:  REEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFCSVSWCRRVANRVAHAAAKL
        R++       L+         E +AI++G+ V       R  V+TD  +   ++ +      ++  L+++I+ ++    F  +S+  R ANRVAHA A  
Subjt:  REEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFCSVSWCRRVANRVAHAAAKL

Query:  VLEEGVQGIWLEDVP
         L      +W+  +P
Subjt:  VLEEGVQGIWLEDVP

A0A803QQ69 Uncharacterized protein

1.8e-57

30.44

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Query:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY
        +WG+ L+ +G RWRV +G  + +++DRWIPRG+   +     + P   VN LL+   +W+ E +E +  K+D   ++GI   R  G+D L+WHY  +G Y
Subjt:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY

Query:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP
        TV SGY L    K +A  SN+ + R WWK +W   I  K+K F WR+ H ++P+   L  RG+ +  +CS C  +EET  HA+W+C   K  W+ + F+ 
Subjt:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFP

Query:  IPGPRSIRSPAELL---WWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGW-SWVTEYLAHF----------RGFQGRRS----------
        +  P+ I    +LL    +  T  +    E F+ LSW VWN+RN+ +F        D E W  W  +Y              +   G+RS          
Subjt:  IPGPRSIRSPAELL---WWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGW-SWVTEYLAHF----------RGFQGRRS----------

Query:  EGGDAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEI--KQIL
           DA+  S  Q  S+ A+IRN   +++    +     + V + E LA++ GLL+ +        V +D+      ++S     ++ GS + EI    +L
Subjt:  EGGDAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEI--KQIL

Query:  KGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFSE
         G +     +  R  N+VAH+ AK  ++      W E +P+  A +  +E
Subjt:  KGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFSE

A0A803QQT2 Uncharacterized protein

3.5e-61

32.03

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Query:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY
        +WGK L+ +G RWRVG+G+S+ + +D W+PR  T KV     L     V  L   D  W +  I S+F   D + ILGIP      +D +LWHY K G Y
Subjt:  MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCY

Query:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLK-EETSFHAIWECGWAKKQWRASPFF
        +V+SGY++A     E   SN+  + +WWK +W  +IP K+K F W++ H ++P  VNL  RG+  S +CSRC    +E+  HA+WEC  +K  WR S  +
Subjt:  TVRSGYKLAVRLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLK-EETSFHAIWECGWAKKQWRASPFF

Query:  PIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGFQGR-RSEGG------------------D
                     +L   +   +   LE F+++SW +WN RN  +   G    + EE   W   +LA FRG  GR RS+                    D
Subjt:  PIPGPRSIRSPAELLWWCSTNLNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGFQGR-RSEGG------------------D

Query:  AATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFC
        A        S +G ++R+    VL     +++  L    LE +AI++G+ V       R  VETD  +   ++ +      ++  L++ I+ ++    F 
Subjt:  AATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFC

Query:  SVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVP
         +S+  R ANRVAHA A   L      +W+  +P
Subjt:  SVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G02650.1 Ribonuclease H-like superfamily protein

2.2e-15

24.04

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Query:  VRSGYKLAVR--LKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFF
        +RSGY +A    L  E          +  + +W   +  KIK F WR     + T   LRSR +D  P+C RC ++EET  H ++ C + +  WR++   
Subjt:  VRSGYKLAVR--LKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFF

Query:  ---PIPGPRSIRSPAELLWWCSTNLNIRSLEGFMV--LSWWVWNRRNKDLFS--------EGDAGGRDEEGWSWVTEYLAHF------------------
               P S       L   S      SL+ F+   + W +W  RN  LF         E   G +D   W    E   +                   
Subjt:  ---PIPGPRSIRSPAELLWWCSTNLNIRSLEGFMV--LSWWVWNRRNKDLFS--------EGDAGGRDEEGWSWVTEYLAHF------------------

Query:  -----RGFQGRRSEGGDAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEV
              G+     + G    + YT+S   G  IR     ++L     ++        E L     L V  A G   +  E+DS  +  ++N+   D S +
Subjt:  -----RGFQGRRSEGGDAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEV

Query:  GSLVDEIKQILKGMEFCSVSWCRRVANRVAHAAAKLV
        G+L+ +I+  +  + +CS+ +  R  N  A A A  V
Subjt:  GSLVDEIKQILKGMEFCSVSWCRRVANRVAHAAAKLV

AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)

7.8e-05

35.56

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Query:  KDRWIPR--GSTLKVIYN--QGLVPEAKVNILLNPDSS-WKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCYTVRSGYKLA
        KD WIP       K I N    L+    VN L++ +++ WK + +++L    D   ILGI   R    D   W + K G YTV+SGY +A
Subjt:  KDRWIPR--GSTLKVIYN--QGLVPEAKVNILLNPDSS-WKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCYTVRSGYKLA

AT3G09510.1 Ribonuclease H-like superfamily protein

3.6e-18

23.39

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Query:  GKSLLGEGVRWRVGDGQSINISKDRWI----PRGSTLKVIYNQGLVPEAKVNILLNPDSS---WKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYE
        G +LL +G R  +GDGQ+I I  D  +    PR    +  Y      E  +N L     S   W    I     + D   I  I   +    D ++W+Y 
Subjt:  GKSLLGEGVRWRVGDGQSINISKDRWI----PRGSTLKVIYNQGLVPEAKVNILLNPDSS---WKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYE

Query:  KDGCYTVRSGYKLAVR--LKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQW
          G YTVRSGY L       N    +           +W   I  K+K F WR   + + T   L +RG+ I P C RC  + E+  HA++ C +A   W
Subjt:  KDGCYTVRSGYKLAVR--LKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQW

Query:  RASPFFPIPGPRSIRSPAELLWWCSTNLNIRSLEGF-----MVLSWWVWNRRNKDLFSEGDAG------GRDEEGWSWVTEYLAHFRGFQGRRSEGG---
        R S    I          E +      +   ++  F     + L W +W  RN  +F++              E   W+    +H +     R       
Subjt:  RASPFFPIPGPRSIRSPAELLWWCSTNLNIRSLEGF-----MVLSWWVWNRRNKDLFSEGDAG------GRDEEGWSWVTEYLAHFRGFQGRRSEGG---

Query:  --------------DAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGS
                      DA  +     ++ G IIRN     +      +    +    ET A+   L      G++++ +E D   +  ++N     +S   S
Subjt:  --------------DAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGS

Query:  LVDEIKQI-LKGMEFCSV--SWCRRVANRVAHAAAK
        L + ++ I     +F S+   + RR  N++AH  AK
Subjt:  LVDEIKQI-LKGMEFCSV--SWCRRVANRVAHAAAK

AT3G25270.1 Ribonuclease H-like superfamily protein

1.6e-10

23.76

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Query:  MWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFPIPGPRSIRSPAE-----LLWWCSTNLNIRS
        +W  +   KIK F W+L    + T  NL+ R +   P C RC  ++ETS H  ++C +A++ WRAS   P    R+     E     LL  C  N   + 
Subjt:  MWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFPIPGPRSIRSPAE-----LLWWCSTNLNIRS

Query:  LEGFMVLSWWVWNRRNKDLFSEGDAGGR--------DEEGWSWVTEYL----------AHFRGFQGRR----------SEGGDAATNSYTQSSSIGAIIR
            + + W +W  RN+ +F +     +        D + W     Y+           H +    R               D A N  T+++  G ++R
Subjt:  LEGFMVLSWWVWNRRNKDLFSEGDAGGR--------DEEGWSWVTEYL----------AHFRGFQGRR----------SEGGDAATNSYTQSSSIGAIIR

Query:  NEREEVLLTVGRLVRFVLDVDSLET--LAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFCSVSWCRRVANRVAHA
        +E   V +  G+ +      DSLE+   A+   +  A + G+ ++  E DS +V  ++N+ + +     + + E +   K  E     W  R  N+ A  
Subjt:  NEREEVLLTVGRLVRFVLDVDSLET--LAIREGLLVARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFCSVSWCRRVANRVAHA

Query:  AAK
         AK
Subjt:  AAK

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

8.4e-07

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Query:  VVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQ
        +   W   +W  +I  KIK+  W+  +  +P    L SR + I P C+RC+   ET  H ++ C +A+++
Subjt:  VVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQ

Sequences

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CDS sequence

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ATGTGGGGAAAGTCACTGTTGGGGGAGGGAGTTCGATGGAGGGTTGGAGATGGGCAGTCCATTAACATAAGTAAGGATAGATGGATTCCTAGAGGTTCTACGCTGAAGGT
TATCTATAATCAAGGGCTAGTTCCTGAGGCTAAAGTGAATATCCTGTTGAACCCAGATAGCTCGTGGAAAAAGGAGTTGATTGAGTCCTTGTTTCGAAAGGAGGATGCGG
AGGCGATTCTTGGCATCCCAAGACCGAGGAGAATGGGTCAGGACACTCTGTTGTGGCATTATGAGAAAGATGGTTGTTATACTGTGCGTAGTGGATATAAGTTGGCTGTG
AGGCTGAAAAATGAAGCAGGGTGTTCAAACCAGGATGTAGTGAGGAAGTGGTGGAAGTGCATGTGGGGCTGCCAAATTCCCAATAAGATTAAGATCTTCTGCTGGAGGTT
ATTTCACGAGTTCATTCCCACAGCTGTTAACCTCCGAAGTAGGGGTGTAGATATTTCCCCTATGTGCTCTAGATGCAAGCTGAAAGAGGAGACCTCCTTTCATGCAATCT
GGGAATGTGGGTGGGCGAAAAAGCAGTGGAGGGCCTCTCCTTTCTTCCCTATCCCGGGACCCCGATCAATCCGAAGCCCAGCTGAGTTACTATGGTGGTGTAGCACAAAC
TTGAATATTCGCAGTCTGGAGGGTTTTATGGTTCTTAGCTGGTGGGTGTGGAATAGGAGGAATAAGGACTTGTTTTCGGAAGGAGATGCGGGTGGAAGGGATGAGGAGGG
ATGGAGTTGGGTAACTGAGTATTTAGCTCATTTCAGGGGTTTCCAAGGGAGAAGGTCTGAGGGGGGGGATGCGGCGACAAACAGTTATACGCAATCCAGTAGTATAGGAG
CTATAATTCGGAATGAGAGAGAGGAAGTTTTACTTACCGTCGGGAGGCTGGTTCGATTTGTGCTAGATGTGGATTCGTTGGAGACTCTAGCAATCCGTGAGGGTTTGTTG
GTGGCTAGAGCAGCTGGTTTTTCGAGACTGGAGGTGGAGACCGATTCTTCACGGGTTGCGGCCATGGTTAACTCGAGCCGGAGAGATCTGTCTGAGGTGGGCTCTCTGGT
TGACGAGATAAAGCAGATTTTGAAGGGCATGGAGTTCTGCTCTGTGTCTTGGTGCCGCAGAGTTGCCAATCGTGTAGCTCACGCAGCGGCGAAGCTGGTTCTTGAGGAAG
GAGTGCAAGGCATCTGGTTGGAGGATGTGCCGACAAGTATTGCAGAGGTTTATTTTAGTGAGGTGTTGAGCGGCCAAGCTCTAAGGGCTAGTGCCTCTTCTGTTGCCGTC
TGTTAG

mRNA sequence

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Protein sequence

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MWGKSLLGEGVRWRVGDGQSINISKDRWIPRGSTLKVIYNQGLVPEAKVNILLNPDSSWKKELIESLFRKEDAEAILGIPRPRRMGQDTLLWHYEKDGCYTVRSGYKLAV
RLKNEAGCSNQDVVRKWWKCMWGCQIPNKIKIFCWRLFHEFIPTAVNLRSRGVDISPMCSRCKLKEETSFHAIWECGWAKKQWRASPFFPIPGPRSIRSPAELLWWCSTN
LNIRSLEGFMVLSWWVWNRRNKDLFSEGDAGGRDEEGWSWVTEYLAHFRGFQGRRSEGGDAATNSYTQSSSIGAIIRNEREEVLLTVGRLVRFVLDVDSLETLAIREGLL
VARAAGFSRLEVETDSSRVAAMVNSSRRDLSEVGSLVDEIKQILKGMEFCSVSWCRRVANRVAHAAAKLVLEEGVQGIWLEDVPTSIAEVYFSEVLSGQALRASASSVAV
C

Lag0006332 (gene) of Sponge gourd (AG-4) v1 genome