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Lag0006336 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006336
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr6:41395769..41396784
RNA-Seq ExpressionLag0006336
SyntenyLag0006336
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015380691.1 uncharacterized protein LOC107174364 [Citrus sinensis]3.8e-1933.54Show/hide
Query:  TEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAFRSAA------------------KEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLK
        TE+  K  ++  GPW +DRA+L+L EPKG     + +F   A                  +E+G ++G VE+++ +++ E   + + RI++ I++T PLK
Subjt:  TEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAFRSAA------------------KEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLK

Query:  RGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGTNEEEIPYGHWLR
        + +F+K     ++  + V YE+LPDFCY CG + H  KEC    G  +E++PYG W++
Subjt:  RGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGTNEEEIPYGHWLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.2e-1734.2Show/hide
Query:  KGHIVDSGPWFYDRAMLLLEEPKG-----DCSGDELAF-------------RSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFI
        K  ++ SGPW +++++L+L  P       D + +  AF                A  +G+ LG VE+++  D A+      +R++++IDV+ PL+RG+ +
Subjt:  KGHIVDSGPWFYDRAMLLLEEPKG-----DCSGDELAF-------------RSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFI

Query:  KFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDS---GTNEEEIPYGHWLREPIKLKTM----EPVTSTGGRFNQMGGRGRGRGGRSD
        K   +G + W  + YEKLPDFCY CG++ H  +EC+  S    TN  E  YG WLR  +  K++    E V   GGRF +      GRGGR D
Subjt:  KFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDS---GTNEEEIPYGHWLREPIKLKTM----EPVTSTGGRFNQMGGRGRGRGGRSD

XP_030936068.1 uncharacterized protein LOC115961187 [Quercus lobata]4.2e-1829.91Show/hide
Query:  PEEKASVFHLQEEV--IDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAF------------------RSAAKEIGSLLGKVEQVDLEDDAEV
        P +   +  ++EEV  ++  +++ K  +++  PW Y + ++L+++ +GD    +L F                  R     IG+ LG+V +VD+ D   V
Subjt:  PEEKASVFHLQEEV--IDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAF------------------RSAAKEIGSLLGKVEQVDLEDDAEV

Query:  SCDSSLRIKIQIDVTCPLKRGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGTNE----EEIPYGHWLR-EPIKLKTMEPVTSTGGRF
             L ++++IDVT  L RG   K V  G ++W+   YE+LP+FCY CG L H +KEC  + G ++    EE+ YG W+R +P+K    E         
Subjt:  SCDSSLRIKIQIDVTCPLKRGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGTNE----EEIPYGHWLR-EPIKLKTMEPVTSTGGRF

Query:  NQMGGRGRGRGGRS
          + G+  G G RS
Subjt:  NQMGGRGRGRGGRS

XP_030957736.1 uncharacterized protein LOC115979822 [Quercus lobata]1.9e-1831.31Show/hide
Query:  PEEKASVFHLQEEV--IDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAF------------------RSAAKEIGSLLGKVEQVDLEDDAEV
        P +   +  ++EEV  ++  +++ K  +++  PW Y++ ++LL++ +GD    ++ F                  R     IG+ LG+V +VD+ D   V
Subjt:  PEEKASVFHLQEEV--IDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAF------------------RSAAKEIGSLLGKVEQVDLEDDAEV

Query:  SCDSSLRIKIQIDVTCPLKRGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGT-NE---EEIPYGHWLR-EPIKLKTMEPVTSTGGRF
             LR++++IDVT  L RG  IK V  G ++W+   YE+LP+ CY CG L H +KEC  + G  NE   EE+ YG W+R +P K    +P      + 
Subjt:  SCDSSLRIKIQIDVTCPLKRGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGT-NE---EEIPYGHWLR-EPIKLKTMEPVTSTGGRF

Query:  NQMGGRGRGRGGRS
          + G+  G G RS
Subjt:  NQMGGRGRGRGGRS

XP_042942846.1 uncharacterized protein LOC122277028 [Carya illinoinensis]2.2e-1932.97Show/hide
Query:  VIDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAFRSA------------------AKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVT
        +++  E + K  ++  GPW +++ ++L +E +G     E++  +A                   K IG  LGKV +VD++ D +++    +R+++ +D+T
Subjt:  VIDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAFRSA------------------AKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVT

Query:  CPLKRGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDV----DSGTNEEEIPYGHWLREPIKLKTMEPVTSTGGRFN
         PL R   I  + +  E W+  TYE+LPDFCY CGRL H  KECD      +   EE +PYG WLR            STGG FN
Subjt:  CPLKRGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDV----DSGTNEEEIPYGHWLREPIKLKTMEPVTSTGGRFN

TrEMBL top hitse value%identityAlignment
A0A2Z6N2E1 Uncharacterized protein1.7e-1733.96Show/hide
Query:  HIVDSGPWFYDRAMLLLEEPKG-------DCSGD-----------ELAFRSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFIKF
        H++ +GPW +DR +L+L+   G       D S             +L   S AK++G L+GK E++D +++  + C   L+IK+ ID+  P+KRG  +KF
Subjt:  HIVDSGPWFYDRAMLLLEEPKG-------DCSGD-----------ELAFRSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFIKF

Query:  VRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGTN--------EEEIPYGHWLR
           G +  +   YE+LP FC+ CGR+ H I+EC+     +        E+E+P+G WLR
Subjt:  VRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGTN--------EEEIPYGHWLR

A0A392MFB2 Zinc CCHC-type-like protein1.7e-1732.57Show/hide
Query:  HIVDSGPWFYDRAMLLLEEPKGDCSGDELAFR------------------SAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFIKF
        +++ +GPW +D  +L+L+   G     E+  +                  S A ++G +LGK E+ D +D   +     LR K+QID+T PLKRG  +++
Subjt:  HIVDSGPWFYDRAMLLLEEPKGDCSGDELAFR------------------SAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFIKF

Query:  VRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECD----VD----SGTNEEEIPYGHWLR-EPIKLKTMEPVTSTG
          NG +  +   YE+LP FC+ CGR+ H +++CD    +D        E+EIP+G WLR  P+   T EP   +G
Subjt:  VRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECD----VD----SGTNEEEIPYGHWLR-EPIKLKTMEPVTSTG

A0A6J1D765 uncharacterized protein LOC1110179025.9e-1834.2Show/hide
Query:  KGHIVDSGPWFYDRAMLLLEEPKG-----DCSGDELAF-------------RSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFI
        K  ++ SGPW +++++L+L  P       D + +  AF                A  +G+ LG VE+++  D A+      +R++++IDV+ PL+RG+ +
Subjt:  KGHIVDSGPWFYDRAMLLLEEPKG-----DCSGDELAF-------------RSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFI

Query:  KFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDS---GTNEEEIPYGHWLREPIKLKTM----EPVTSTGGRFNQMGGRGRGRGGRSD
        K   +G + W  + YEKLPDFCY CG++ H  +EC+  S    TN  E  YG WLR  +  K++    E V   GGRF +      GRGGR D
Subjt:  KFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDS---GTNEEEIPYGHWLREPIKLKTM----EPVTSTGGRFNQMGGRGRGRGGRSD

A0A6P9EID8 uncharacterized protein LOC1183488563.8e-1731.79Show/hide
Query:  VIDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAFRSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFIKFVRNGTEK
        +++  + + K  I+  GPW +D  ++LL++ +G+  G  L        IG+ +G VE+VD E  +EV+    LRI+++++++ PL RG+ +K  + G+  
Subjt:  VIDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAFRSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFIKFVRNGTEK

Query:  WIAVTYEKLPDFCYGCGRLCHIIKECDVD---SGTNEEEIPYGHWLREPIKLKTMEPVTSTGGRFNQMGGRGR
        WI   YE+LP+FCY CG+L H  K+C+++      + +++P+G WL           V +T GR     G+ R
Subjt:  WIAVTYEKLPDFCYGCGRLCHIIKECDVD---SGTNEEEIPYGHWLREPIKLKTMEPVTSTGGRFNQMGGRGR

A0A7N2R0C3 Reverse transcriptase domain-containing protein1.7e-1731.58Show/hide
Query:  VIDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAF------------------RSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVT
        +++  +++ K  ++D  PW Y++ ++L +E +GD S  ++                    +   K IG  +GK  +VD+E+   V   + LR++++IDVT
Subjt:  VIDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAF------------------RSAAKEIGSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVT

Query:  CPLKRGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGTN----EEEIPYGHWLR-EPIK
          L RG  I  +  G  +W+   YE+LP+FCY CG L H +K+C  + G +    E ++ YG WLR EPI+
Subjt:  CPLKRGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGTN----EEEIPYGHWLR-EPIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCTATTCAACAAGGTTCTCCGTTTCTCTCTAGGAAAGGTAGAAAGTGGCGGCGTTTCTTGCCGGATTTGGAGTAGTTCATCTGTTGAAGGAAATGATGAAGAAAG
GATAATTCAGCAACTTGCAGCTATGAAGGTCACGCCTGAGGAAAAAGCCAGCGTGTTCCATCTGCAAGAAGAGGTTATTGATATTACAGAGAAAAAGATTAAAGGGCATA
TAGTGGACTCGGGGCCTTGGTTCTACGATAGAGCTATGCTTCTTCTAGAAGAACCAAAAGGCGACTGCAGTGGCGATGAATTGGCATTCAGGTCTGCAGCGAAGGAAATT
GGTAGCTTGTTGGGTAAAGTGGAGCAAGTGGATCTGGAAGATGATGCCGAAGTTTCATGTGATAGTTCTCTTCGTATAAAGATACAAATTGACGTTACTTGCCCTTTGAA
ACGTGGTGTTTTTATCAAATTTGTAAGGAATGGAACAGAGAAATGGATTGCTGTAACGTATGAGAAGCTTCCCGACTTCTGCTATGGATGTGGACGTCTGTGCCATATAA
TCAAAGAATGTGATGTAGACAGTGGCACAAATGAAGAGGAAATACCATATGGTCATTGGCTTCGAGAACCGATCAAGCTAAAAACTATGGAACCAGTAACTTCTACAGGG
GGAAGGTTCAATCAGATGGGAGGAAGAGGTAGAGGACGAGGTGGTCGTTCTGATGCCTGGGGTGATAGGGGATCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCTATTCAACAAGGTTCTCCGTTTCTCTCTAGGAAAGGTAGAAAGTGGCGGCGTTTCTTGCCGGATTTGGAGTAGTTCATCTGTTGAAGGAAATGATGAAGAAAG
GATAATTCAGCAACTTGCAGCTATGAAGGTCACGCCTGAGGAAAAAGCCAGCGTGTTCCATCTGCAAGAAGAGGTTATTGATATTACAGAGAAAAAGATTAAAGGGCATA
TAGTGGACTCGGGGCCTTGGTTCTACGATAGAGCTATGCTTCTTCTAGAAGAACCAAAAGGCGACTGCAGTGGCGATGAATTGGCATTCAGGTCTGCAGCGAAGGAAATT
GGTAGCTTGTTGGGTAAAGTGGAGCAAGTGGATCTGGAAGATGATGCCGAAGTTTCATGTGATAGTTCTCTTCGTATAAAGATACAAATTGACGTTACTTGCCCTTTGAA
ACGTGGTGTTTTTATCAAATTTGTAAGGAATGGAACAGAGAAATGGATTGCTGTAACGTATGAGAAGCTTCCCGACTTCTGCTATGGATGTGGACGTCTGTGCCATATAA
TCAAAGAATGTGATGTAGACAGTGGCACAAATGAAGAGGAAATACCATATGGTCATTGGCTTCGAGAACCGATCAAGCTAAAAACTATGGAACCAGTAACTTCTACAGGG
GGAAGGTTCAATCAGATGGGAGGAAGAGGTAGAGGACGAGGTGGTCGTTCTGATGCCTGGGGTGATAGGGGATCGTGA
Protein sequenceShow/hide protein sequence
MSLFNKVLRFSLGKVESGGVSCRIWSSSSVEGNDEERIIQQLAAMKVTPEEKASVFHLQEEVIDITEKKIKGHIVDSGPWFYDRAMLLLEEPKGDCSGDELAFRSAAKEI
GSLLGKVEQVDLEDDAEVSCDSSLRIKIQIDVTCPLKRGVFIKFVRNGTEKWIAVTYEKLPDFCYGCGRLCHIIKECDVDSGTNEEEIPYGHWLREPIKLKTMEPVTSTG
GRFNQMGGRGRGRGGRSDAWGDRGS