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Lag0006340 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006340
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description(R)-mandelonitrile lyase 1-like
Genome locationchr6:41418548..41419683
RNA-Seq ExpressionLag0006340
SyntenyLag0006340
Gene Ontology termsGO:0016614 - oxidoreductase activity, acting on CH-OH group of donors (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR000172 - Glucose-methanol-choline oxidoreductase, N-terminal
IPR036188 - FAD/NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452065.1 PREDICTED: (R)-mandelonitrile lyase 1-like [Cucumis melo]2.0e-2947.95Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL---------CWD-----------IVPDNGFDLRDLVGTKIG------
        EDGVE++RGRVLGG SM+N G YSR + EFF+  GV ++ME+VEKAY+WV+            W            +VPDNGFDLR LVGTKIG      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL---------CWD-----------IVPDNGFDLRDLVGTKIG------

Query:  ---------------------------------GLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                         GLSATGVSYSDSKG LHTA I KNGEII+S GAIGS Q
Subjt:  ---------------------------------GLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

XP_022153313.1 (R)-mandelonitrile lyase 1-like [Momordica charantia]1.5e-2948.24Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKIG-------
        EDGVE+LRGRVLGG +MINGG YSR + EFF T GV+++ME+VEKAYQWV+           W            ++PDNGFDLR LVGT+IG       
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKIG-------

Query:  --------------------------------GLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                        GLSA+GVSYSDS+G LHTA IRK GEI LS GAIGS Q
Subjt:  --------------------------------GLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

XP_022997400.1 (R)-mandelonitrile lyase 1-like isoform X1 [Cucurbita maxima]5.1e-3050.58Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------
        ++GV++LRGRVLGGTSMINGGVYS+ N +FFKTQ GV KF+MEMVEKAY+WV+           W            IVPDNGF+LRD+VGTKI      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------

Query:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                          G SATGV YSDSKG LHTA+IRKNGEII+S GAIGS Q
Subjt:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

XP_022997401.1 (R)-mandelonitrile lyase 1-like isoform X2 [Cucurbita maxima]5.1e-3050.58Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------
        ++GV++LRGRVLGGTSMINGGVYS+ N +FFKTQ GV KF+MEMVEKAY+WV+           W            IVPDNGF+LRD+VGTKI      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------

Query:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                          G SATGV YSDSKG LHTA+IRKNGEII+S GAIGS Q
Subjt:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

XP_038889318.1 (R)-mandelonitrile lyase 3-like [Benincasa hispida]1.4e-3050.58Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------
        EDGVE++RGR+LGGTSMINGGVYSRANPEFFKTQ G+ + +MEMVEKAYQWV+           W            + PDNGFDLRD+VGTKI      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------

Query:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                          GLSA GV YSDSKG LHTA IR+ GEIILS GA+GS Q
Subjt:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

TrEMBL top hitse value%identityAlignment
A0A0A0LJ76 GMC_OxRdtase_N domain-containing protein6.1e-2949.42Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------
        EDGVE++RGRVLGG+SMINGGVYSRA+PEFF+TQ G+ + +MEMVEKAY+WV+           W            + PDNGFDLRD VGTKI      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------

Query:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                          GLSA GV YSDSKG LHTA IRK GEII+S GAIGS Q
Subjt:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

A0A1S3BTS5 (R)-mandelonitrile lyase 1-like9.5e-3047.95Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL---------CWD-----------IVPDNGFDLRDLVGTKIG------
        EDGVE++RGRVLGG SM+N G YSR + EFF+  GV ++ME+VEKAY+WV+            W            +VPDNGFDLR LVGTKIG      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL---------CWD-----------IVPDNGFDLRDLVGTKIG------

Query:  ---------------------------------GLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                         GLSATGVSYSDSKG LHTA I KNGEII+S GAIGS Q
Subjt:  ---------------------------------GLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

A0A6J1DH55 (R)-mandelonitrile lyase 1-like7.3e-3048.24Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKIG-------
        EDGVE+LRGRVLGG +MINGG YSR + EFF T GV+++ME+VEKAYQWV+           W            ++PDNGFDLR LVGT+IG       
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKIG-------

Query:  --------------------------------GLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                        GLSA+GVSYSDS+G LHTA IRK GEI LS GAIGS Q
Subjt:  --------------------------------GLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

A0A6J1K7D5 (R)-mandelonitrile lyase 1-like isoform X22.5e-3050.58Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------
        ++GV++LRGRVLGGTSMINGGVYS+ N +FFKTQ GV KF+MEMVEKAY+WV+           W            IVPDNGF+LRD+VGTKI      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------

Query:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                          G SATGV YSDSKG LHTA+IRKNGEII+S GAIGS Q
Subjt:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

A0A6J1K9H9 (R)-mandelonitrile lyase 1-like isoform X12.5e-3050.58Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------
        ++GV++LRGRVLGGTSMINGGVYS+ N +FFKTQ GV KF+MEMVEKAY+WV+           W            IVPDNGF+LRD+VGTKI      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQ-GV-KFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKI------

Query:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                          G SATGV YSDSKG LHTA+IRKNGEII+S GAIGS Q
Subjt:  ---------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

SwissProt top hitse value%identityAlignment
O24243 (R)-mandelonitrile lyase 13.8e-2032.76Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVK--------RLCWD-----------IVPDNGFDLRDLVGTKIGG------
        EDG++++R R+LGGT++IN GVY+RAN  F+   G+++++++V K Y+WV+           W            I+PDNGF L    GT++ G      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVK--------RLCWD-----------IVPDNGFDLRDLVGTKIGG------

Query:  -------------------------------------LSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                             LSA GV Y+DS GN H A +R NGE+I+S G IG+ Q
Subjt:  -------------------------------------LSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

O50048 (R)-mandelonitrile lyase 24.5e-2135.26Show/hide
Query:  DGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRLC--------WD-----------IVPDNGFDLRDLVGTKI---------
        DG++++RGRVLGGTSMIN GVY RAN  FF   G++++M++V K Y WV+           W            I+PDNGF L  L GT++         
Subjt:  DGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRLC--------WD-----------IVPDNGFDLRDLVGTKI---------

Query:  ----------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                           G++A GV Y+DS G  H A +R +GE+ILS G IGS Q
Subjt:  ----------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

P52706 (R)-mandelonitrile lyase 11.9e-1934.1Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRLC--------WDIV-----------PDNGFDLRDLVGTKI--------
        EDG++++RGRVLGGTSMIN GVY+RAN   +   GV ++M++V K Y+WV+           W  V           P++GF L    GT+I        
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRLC--------WDIV-----------PDNGFDLRDLVGTKI--------

Query:  ----------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                           GL+ATGV Y DS G  H A +R  GE+I+S G IG+ Q
Subjt:  ----------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

P52707 (R)-mandelonitrile lyase 31.3e-2033.91Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVK--------RLCWD-----------IVPDNGFDLRDLVGTKI--------
        EDG++++RGRVLGGTSMIN GVY RAN  FF   G++++M++V + Y+WV+           W            I+P+NGF +  L GT++        
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVK--------RLCWD-----------IVPDNGFDLRDLVGTKI--------

Query:  -----------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                            G++A GV Y+DS G  H A +R  GE+ILS G IGS Q
Subjt:  -----------------------------------GGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

Q9SSM2 (R)-mandelonitrile lyase-like1.6e-1834.27Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKIGG------
        E+GV + RGRVLGG+S IN G YSRA+ +FF+  G+ +++  V ++Y+WV+R          W            + P NGF L   VGTKIGG      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKIGG------

Query:  -----------------------------------------LSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                                 +SA GV Y D  G  H ALIR  GE+ILS GA+GS Q
Subjt:  -----------------------------------------LSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

Arabidopsis top hitse value%identityAlignment
AT1G14190.1 Glucose-methanol-choline (GMC) oxidoreductase family protein1.8e-1239.64Show/hide
Query:  DGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRLC--------WDIV-----------PDNGFDLRDLVGTKIGGLSATGVS
        DG+E+ RGRVLGG+S INGG YSRA+ EF K  G  ++  +V+++Y+WV+           W  V           P NG+ L    GTKIGG      S
Subjt:  DGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRLC--------WDIV-----------PDNGFDLRDLVGTKIGGLSATGVS

Query:  YSDSKGNLHTA
          D  G  HT+
Subjt:  YSDSKGNLHTA

AT1G72970.1 Glucose-methanol-choline (GMC) oxidoreductase family protein4.2e-1433.14Show/hide
Query:  DGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKR--------LCWD-----------IVPDNGFDLRDLVGTKIGGL------
        DGV + R RVLGG S IN G YSRA+  F K  G  ++ ++V+++Y WV+R          W            + P NGF    + GTKIGG       
Subjt:  DGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKR--------LCWD-----------IVPDNGFDLRDLVGTKIGGL------

Query:  -------------------------------------SATGVSYSDSKGNLHTALI--RKNGEIILSPGAIGSTQ
                                               TGV + D KGN H AL+  RK  E+ILS GAIGS Q
Subjt:  -------------------------------------SATGVSYSDSKGNLHTALI--RKNGEIILSPGAIGSTQ

AT1G72970.2 Glucose-methanol-choline (GMC) oxidoreductase family protein4.2e-1433.14Show/hide
Query:  DGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKR--------LCWD-----------IVPDNGFDLRDLVGTKIGGL------
        DGV + R RVLGG S IN G YSRA+  F K  G  ++ ++V+++Y WV+R          W            + P NGF    + GTKIGG       
Subjt:  DGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKR--------LCWD-----------IVPDNGFDLRDLVGTKIGGL------

Query:  -------------------------------------SATGVSYSDSKGNLHTALI--RKNGEIILSPGAIGSTQ
                                               TGV + D KGN H AL+  RK  E+ILS GAIGS Q
Subjt:  -------------------------------------SATGVSYSDSKGNLHTALI--RKNGEIILSPGAIGSTQ

AT1G73050.1 Glucose-methanol-choline (GMC) oxidoreductase family protein1.1e-1934.27Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKIGG------
        E+GV + RGRVLGG+S IN G YSRA+ +FF+  G+ +++  V ++Y+WV+R          W            + P NGF L   VGTKIGG      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRL--------CWD-----------IVPDNGFDLRDLVGTKIGG------

Query:  -----------------------------------------LSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ
                                                 +SA GV Y D  G  H ALIR  GE+ILS GA+GS Q
Subjt:  -----------------------------------------LSATGVSYSDSKGNLHTALIRKNGEIILSPGAIGSTQ

AT5G51930.1 Glucose-methanol-choline (GMC) oxidoreductase family protein1.0e-1231.58Show/hide
Query:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKR--------LCWDIV-----------PDNGFDLRDLVGTKIGG------
        EDGV + R RVLGG S+INGG YSRA  ++   +  ++ ME VE AY+WV++        + W              PDNGF    + GTKIGG      
Subjt:  EDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKR--------LCWDIV-----------PDNGFDLRDLVGTKIGG------

Query:  --------------------------------LSATGVSYSDSKGNLHTALI--RKNGEIILSPGAIGSTQ
                                          A  V + D+ G  H A +  +   E+ILS GA+GS Q
Subjt:  --------------------------------LSATGVSYSDSKGNLHTALI--RKNGEIILSPGAIGSTQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGGACGGCGTAGAGAGTCTAAGAGGGCGAGTCCTTGGCGGCACTAGCATGATCAATGGTGGTGTGTACTCTAGAGCTAATCCAGAGTTCTTCAAAACACAAGG
CGTGAAATTCAACATGGAAATGGTGGAGAAGGCGTATCAATGGGTGAAGAGGCTTTGCTGGGATATTGTTCCTGATAATGGATTTGATTTGAGAGACCTTGTGGGAACTA
AAATTGGAGGTTTATCAGCAACTGGAGTTTCCTATTCCGATTCAAAAGGAAACCTACATACAGCACTCATCCGTAAGAATGGAGAGATTATTTTGAGTCCTGGAGCCATT
GGAAGCACTCAACACTTCTCCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGGACGGCGTAGAGAGTCTAAGAGGGCGAGTCCTTGGCGGCACTAGCATGATCAATGGTGGTGTGTACTCTAGAGCTAATCCAGAGTTCTTCAAAACACAAGG
CGTGAAATTCAACATGGAAATGGTGGAGAAGGCGTATCAATGGGTGAAGAGGCTTTGCTGGGATATTGTTCCTGATAATGGATTTGATTTGAGAGACCTTGTGGGAACTA
AAATTGGAGGTTTATCAGCAACTGGAGTTTCCTATTCCGATTCAAAAGGAAACCTACATACAGCACTCATCCGTAAGAATGGAGAGATTATTTTGAGTCCTGGAGCCATT
GGAAGCACTCAACACTTCTCCTTCTAA
Protein sequenceShow/hide protein sequence
MMEDGVESLRGRVLGGTSMINGGVYSRANPEFFKTQGVKFNMEMVEKAYQWVKRLCWDIVPDNGFDLRDLVGTKIGGLSATGVSYSDSKGNLHTALIRKNGEIILSPGAI
GSTQHFSF