; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0006360 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0006360
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein UPSTREAM OF FLC
Genome locationchr6:41596827..41597646
RNA-Seq ExpressionLag0006360
SyntenyLag0006360
Gene Ontology termsGO:0051258 - protein polymerization (biological process)
GO:0051302 - regulation of cell division (biological process)
GO:0090708 - specification of plant organ axis polarity (biological process)
GO:2000067 - regulation of root morphogenesis (biological process)
GO:0031234 - extrinsic component of cytoplasmic side of plasma membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653231.1 hypothetical protein Csa_019901 [Cucumis sativus]8.9e-1368.85Show/hide
Query:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ
        GSQL++SEKEI+ A AKCIPRKHK+  A P KK  NNI D PS+T SNSQ+GSKR+D EQQ
Subjt:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ

XP_004149057.2 protein UPSTREAM OF FLC [Cucumis sativus]8.9e-1368.85Show/hide
Query:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ
        GSQL++SEKEI+ A AKCIPRKHK+  A P KK  NNI D PS+T SNSQ+GSKR+D EQQ
Subjt:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ

XP_008457538.1 PREDICTED: protein UPSTREAM OF FLC [Cucumis melo]1.1e-1067.21Show/hide
Query:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ
        GSQL++SEKEI+VARAKCIPRKHK+  A P KK+     D PS+T SNSQ+GSKR+D EQQ
Subjt:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ

XP_023519054.1 protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo]4.1e-1073.21Show/hide
Query:  SQLQLSEKEID-VARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRL
        SQLQ+SEKEID  ARAKCIPRKH+ ++ Q TKK+TNNI D PS+TTSN+Q+GSKRL
Subjt:  SQLQLSEKEID-VARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRL

XP_038893572.1 protein UPSTREAM OF FLC [Benincasa hispida]9.9e-1270.49Show/hide
Query:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ
        G QLQ+SEKE+D ARAKCIPRK K TT   TK+  NNI D PS+TTSNSQ+GSKRLD E+Q
Subjt:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ

TrEMBL top hitse value%identityAlignment
A0A0A0LXW8 Uncharacterized protein4.3e-1368.85Show/hide
Query:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ
        GSQL++SEKEI+ A AKCIPRKHK+  A P KK  NNI D PS+T SNSQ+GSKR+D EQQ
Subjt:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ

A0A1S3C5W0 protein UPSTREAM OF FLC5.3e-1167.21Show/hide
Query:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ
        GSQL++SEKEI+VARAKCIPRKHK+  A P KK+     D PS+T SNSQ+GSKR+D EQQ
Subjt:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ

A0A5A7SXA9 Protein UPSTREAM OF FLC5.3e-1167.21Show/hide
Query:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ
        GSQL++SEKEI+VARAKCIPRKHK+  A P KK+     D PS+T SNSQ+GSKR+D EQQ
Subjt:  GSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ

A0A6J1HPC6 protein UPSTREAM OF FLC-like2.2e-0969.64Show/hide
Query:  SQLQLSEKEID-VARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRL
        SQLQ+SEKEID  ARAKCIPRKH+ ++ Q TK++T+NI D PS+TTSN+Q+GSKRL
Subjt:  SQLQLSEKEID-VARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRL

A0A6J1HZ99 protein UPSTREAM OF FLC-like1.3e-0969.64Show/hide
Query:  SQLQLSEKEID-VARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRL
        SQLQ+SEKE+D  ARAKCIPRKH+ ++ Q TK++TNNI D PS+TTSN+Q+GSKRL
Subjt:  SQLQLSEKEID-VARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTCACGTTGCCCTCCTTTCTGTTTTTAAAAGTGAAACCCACGCCGCCTCTCCATCCATCTCAATCGCTCGTGTTTGGCCGGCAGCAAGGAAGCCCACATCGCCC
TCATTTCCATTTTTCTTCTTCTCCAGTCGAGATCCCAACCCACGTCGGTCTGAAACCCATGCCCACTGCTTTTCGTTCTTCTCTTCTCCTCTATGCGACAACAACCCTCA
CCCATGACCCCTTTTGTTTTAGATCTGAAACGAAATCGAAACCCAGATCTGGGTTGGGTTTCGTTTCAAATCTGAAACTCCCAATTAGACTGCTTTCTTTTTCATTTGTT
GCAGAGCCCTTAGTTGTGTTTATGACTGCCCTCCATCTGGGTTCACAGCTGCAACTGTCGGAGAAGGAGATCGACGTAGCGCGAGCAAAATGCATACCAAGAAAGCACAA
GGCAACAACAGCCCAACCAACGAAGAAGGACACCAACAACATCGGCGACGACCCCTCTCTCACAACCAGCAATAGCCAATATGGAAGCAAAAGACTCGACACAGAGCAAC
AATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTCACGTTGCCCTCCTTTCTGTTTTTAAAAGTGAAACCCACGCCGCCTCTCCATCCATCTCAATCGCTCGTGTTTGGCCGGCAGCAAGGAAGCCCACATCGCCC
TCATTTCCATTTTTCTTCTTCTCCAGTCGAGATCCCAACCCACGTCGGTCTGAAACCCATGCCCACTGCTTTTCGTTCTTCTCTTCTCCTCTATGCGACAACAACCCTCA
CCCATGACCCCTTTTGTTTTAGATCTGAAACGAAATCGAAACCCAGATCTGGGTTGGGTTTCGTTTCAAATCTGAAACTCCCAATTAGACTGCTTTCTTTTTCATTTGTT
GCAGAGCCCTTAGTTGTGTTTATGACTGCCCTCCATCTGGGTTCACAGCTGCAACTGTCGGAGAAGGAGATCGACGTAGCGCGAGCAAAATGCATACCAAGAAAGCACAA
GGCAACAACAGCCCAACCAACGAAGAAGGACACCAACAACATCGGCGACGACCCCTCTCTCACAACCAGCAATAGCCAATATGGAAGCAAAAGACTCGACACAGAGCAAC
AATGA
Protein sequenceShow/hide protein sequence
MKLTLPSFLFLKVKPTPPLHPSQSLVFGRQQGSPHRPHFHFSSSPVEIPTHVGLKPMPTAFRSSLLLYATTTLTHDPFCFRSETKSKPRSGLGFVSNLKLPIRLLSFSFV
AEPLVVFMTALHLGSQLQLSEKEIDVARAKCIPRKHKATTAQPTKKDTNNIGDDPSLTTSNSQYGSKRLDTEQQ